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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                        --------->ANAC58                           <
    --------->ANAC46                                    --------->ANAC58                           <
---------->HVH21                                       <-------TEIL                             <---
------->TOE1(1)                                     <---------HSFB2a(1)                    ---------
------>At4g35610                                   --------->DAG2                       ---------->DOF2
-ZmHOX2a(2)                                        <---------------AtSPL8--------->HSFB2a(2)  ------
->YAB1         --------->ARR11(3)                ---------->DOF2         <---------HSFC1(1)<--------
>MYB46(3)  ---------->DOF2                   ----------------->AGL1      <---------HSFB2a(2) <------
 
atcggacacaaaaccaaagttctacagagagactaaattttgaaaaataccaaaaaggttcgcaaaattcaagtttctagatgcttaaactaaaagctga  13273200
         <------ZmHOX2a(2)
        --------->ARR11(3)                                            ----------->GT1
---------ANAC58                                                     <---------At4g35610
---------ANAC58                                              --------->MYB52(1)
------WOX13(1)                                           <-----------GT1                  <---------ANAC58
>At4g35610                                      --------->TOE1(3)   --------->At4g35610   <---------ANAC58
--->ATHB12                             ----------->RAV1(1) --------->MYB46(3)           <---------TOE2(3)
-At4g35610        --------->ARR11(3)  <----------ID1   --------->AHL20(2)         <------ZmHOX2a(1)
---YAB1 <---------ARR11(3)   --------->At4g35610--------->TOE2(3)  --------->GLK1(2)    <---------TOE1(3)
 
ttgcttcttaagatcaaatagggtcttcaattagctcaaaaacaacaaaaacctgaaatttaacaaacagaagctgaaaattgaaggatttaagcttgtg  13273300
                                                                                               -----
                                                                                             -------
                                                                                        --------->ALFIN1
                        --------->YAB1        <---------ANAC46                         --------->TOE2(2)
                   <----------DOF2           <---------LBD16                           ------->MYC3
           <----------ID1              ------->TEIL      --------->At4g35610           <-------MYC3
  --------->TOE1(2)<---------DAG2 --------->MYB52(1)--------->CCA1(2)                  --------->TOE1(2)
 
ctaaacttgcgaaaaaaacaaactttatcacaaaaatcaacgaattttgacggagatagaagcagacttacaaaacttcgaaacccaaaacgtgggaaaa  13273400
                                                                               ----------->GT1
                                                       --------->LBD16        --------->YAB1
                                                      --------->LBD16        <---------ATHB12
       --------->ANAC46                               --------->ANAC46     --------->WOX13(1)
       --------->ANAC58                              <---------LBD16     <---------ATHB12
       --------->ANAC58                          ---------->DOF2        --------->ANAC58
     <-----------GT1                            ---------->DOF2         --------->ANAC58       <----
------>GT1               <---------ANAC55(2) --------->TOE2(3)         --------->WOX13(1)   --------
--->DOF2                 --------->ANAC55(2) --------->TOE1(3)   <----------DOF2      ---------->DOF2
 
gagaaatttcacgactcgggcgaaaaaaacgtgatgagaaaacaaaaaccctaaaacccggaaaacctcttttgcaatcaatcagaaaaaaaagaaggaa  13273500
                                              --------->ANAC58
                                              --------->ANAC58
                                             --------->SPL7
                                           --------->TOE1(2)
                                           --------->TOE2(2)
                                         --------------->AtSPL8
                                         <---------------AtSPL3
                                     --------->ANAC58
                                     --------->ANAC58
                                     --------->ANAC46   --------->GLK1(1)
                                --------->TOE2(3)       <---------GLK1(1)
      <------ZmHOX2a(1)         --------->TOE1(3)<---------ARR14(2)
      =========================HOX2a_HOX2a<---------MYB52(2)                                   -----
    <---------TOE2(3)     --------->TOE2(3)<---------SPL7                            ---------->DOF2
 <----------DOF2         <--------HAHB4 --------->MYB52(1)                       <---------ANAC46
-----KAN4(2)            <------ZmHOX2a(2)--------------->AtSPL3                  <---------ANAC58
--->GT1           --------->CCA1(2)---------->DOF2   <---------YAB1              <---------ANAC58
 
taaactttaggataagaagagagacggatcattaacctcaaagcaacgtacgaattctgatttctcactcgattgagagagttttcgtgaaagagagtaa  13273600
                                                                                                <---
                                                                                              ------
                                                                                              ------
                                                                                             <------
                                       --------->ANAC55(2)                                  <-------
                 --------->ANAC58      --------->ANAC46                                   --------->ANAC46
               ---------->DOF2         --------->ANAC55(1)                             --------->GLK1(2)
            ----------->RAV1(1)        <---------ANAC55(2)                             <---------ARR14(2)
         --------->ANAC58           *TSS                --------->ANAC58               --------->ARR14(2)
         --------->ANAC58        --------->AHL20(2)     --------->ANAC58              --------->RVE1(1)
       ---------->DOF2     --------->ANAC58             --------->GLK1(2)       ----------->GT1 ----
   <---------YAB1--------->ANAC58---------->DOF2 ---------->DOF2            <-----------GT1------>NtERF2
------>GT1 <----------ID1  --------->ANAC58  <----------DOF2   <---------AHL20(2)<------ZmHOX2a(1)<-
 
gttattacgatgaagcaacaaagcaatggcaaacaataaaacacataacttttaaagagaagctattttttttatgtttttacaggaaaaaatccgccgg  13273700
                                                --------->YAB1
                                                --------->AHL20(2)
                                                <---------AHL20(2)
                                                <--------HAHB4
                                                -------->ATHB1
                                                --------->ATHB51
                   --------->LBD16              <---------ICU4
                 <---------LBD16               --------->ICU4
               ------>MYB83              --------->WRKY12
               -------->P                --------->WRKY45
             --------->MYB46(3)          --------->WRKY38(1)       <---------AHL20(2)      =========
  --------->ARR14(2)  <-------TEIL     <-------GAMYB              <---------AHL20(2)       <--------
  <---------ARR14(2) <-----------HVH21<---------ANAC58      <----------DOF2                <--------
------ARR14(2) ------>MYB46(1)        <---------ANAC46    ------>MYB46(1)            <---------ARR14(2)
>NtERF2      <---------MYB55(2)       <---------ANAC58  <---------MYB59       ----------->GT1
--->LBD16  --------->PCF2            --------->ZAT18 <-----------GT1      ---------->DOF2 <---------ANAC58
---ANAC46 <-----------GT1        <------ZmHOX2a(1)<---------YAB1 <---------------AGL15    <---------ANAC58
--LBD16  ----------->HVH21 --------->PCF2----------->HVH21------>MYB83    ==========================
----->ARR14(2)<---------ALFIN1<-----------RAV1(2)--------->AHL20(1)--------->ATHB12  --------->ARR14(2)
------TEIL<---------WRKY18(1) <---------LBD16  <---------ATHB51  ===================================
 
gttcgggtctgtttgacccacccggttcagggcccaggagtgcgttgacaattattttaccaacttttatttattgggaaagtgtgaatatttgcttttt  13273800
              --------->AtLEC2
              --------->ANAC58
              --------->ANAC58
          <-----------HVH21
        ------->MYC4
        ------->MYC3
        <-------MYC4
        -------->ABF1
        ------->MYC2
        <-------MYC3
        <-------MYC2
       --------->ANAC55(2)                                                               --------->YAB1
       <---------TGA1a                                                                  <---------YAB1
       --------->O2                                                                   <---------ICU4
       <---------ANAC55(2)                                                        <---------YAB1
       <---------O2                                                               --------->ICU4
=================bZIP_DOF                                 <-------TEIL         <-------TEIL
--DOF2 --------->TGA1a --------->ARR14(2)         --------->ATHB12--------->WOX13(1) <---------YAB1
-DAG2  <--------ABF1   <---------ARR14(2)      --------------->AGL15 --------->YAB1<---------ICU4
=================bZIP_DOF                     <-----------------AGL3<---------ATHB12 --------->ICU4
===============================================================MADS_MADS --------->MYB52(1)
 
ttgtttggacacgtgtcatgcaagtggatttgattcttgatgactctattccactattggattcatatgcaatcacaaacggttcatgattattatagaa  13273900
                                                                                                   <
                                                                                                   <
                                                          <---------TOE1(2)                    <xxxx
      <-------TEIL                            <---------AHL20(2)                               xxxxx
    <-------MYC3                             --------->AHL20(2)                               <xxxxx
    ------->MYC3                             <---------AHL20(1)                            <--------
    ------->MYC2                             <---------AHL20(2)  <---------YAB1    <-----------GT1<-
    <-------MYC2   <---------ANAC46<-----------RAV1(1)    --------->LBD16      <------ZmHOX2a(1)xxxx
 
ataaacacgttcatgtcaagttttgtgaggtttcttctatgtggccaatttttttttcttccaggtttatgatttttatgtaggattaactattctacta  13274000
                            --------->AHL20(2)
                            <---------AHL20(2)
                           --------->YAB1
                       <---------AHL20(2)
                       --------->AHL20(2)
                      <---------AHL20(1)
                      --------->AHL20(2)
                      --------->AHL20(1)
                     --------->YAB1
                 --------->AHL20(2)                                                          <------
           <-------TEIL<---------YAB1                                                       <-------
       --------------->AtSPL3                                                            --------->AHL20(2)
       --------------->AtSPL8                                                            <---------AHL20(2)
       <---------------AtSPL8                                         <---------AHL20(2)--------->AHL20(1)
xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)          <---------AHL20(2)     --------->AHL20(2) <---------AHL20(1)
xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)          --------->AHL20(2)     --------->AHL20(1) <---------AHL20(2)
xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)          --------->YAB1         <---------AHL20(1) --------->AHL20(2)
xxxxxxxxxxxxxxxxxxsmallRNA(si3)              --------->ICU4--------->ATHB12            <---------AHL20(2)
xxxxxxxxxxxxxxxxx>smallRNA(i2)            --------->AHL20(2)         <---------AHL20(2)--------->AHL20(2)
xxxxxxxxxxxxxxxxxxsmallRNA(fl3)      <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)          --------->AHL20(2)
---GT1xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2) <---------AHL20(2)--------->TOE2(3)    ----------->GT1
--------AHL20(2) <---------AHL20(2)  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)      --------->DAG2   <--
xxxxxxxxxxxxxxx>smallRNA(si3)<---------AHL20(2)           <---------YAB1       ---------->DOF2<-----
 
tattatttgggaagtacattttaaatataattttaatttttgtaagtaattatataggtatatcattagaaataaaattttaaaaagtaaattaatttat  13274100
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AGI:  At2g31130.1   
Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO39379.1)
Range:  from: 13270656    to: 13273637    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
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