Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                              --------->ICU4                                                         <---------MYB52(1)                                                        <---------RAP2.6(3)                                                      --------->DEAR3(2)                        <-------GAMYB                 --------->MYB46(3)          -------->P--------->GLK1(2)                 <------------AtMYB77          ------>MYB83 <-----------RAV1(1)     ---------->DOF2<---------GLK1(2)          ------>MYB46(1)               <------MYB46(1) <-----------HVH21                           <         <---------ALFIN1               <---------MYB46(3)  <---------YAB1                          < ---->At4g35610    <---------GLK1(2)    <------MYB83<---------ARR14(2)        ------>ZmHOX2a(1)     - --At4g35610--------->TOE2(3)       <-----------RAV1(1) <-----------TGA1<---------At4g35610--------->At5g28300 ->At4g35610--------->TOE1(3)     <----------DOF2   --------->ARR14(2)  --------->At4g35610--------->LBD16   cttcaaactcccaaccttcacgattctgttgaacaactttgttggtgaagaaaggaaccgtcatgattcttctcatcttcctccaatgctcgccgtaaac  13002400                        --------->LBD16                       --------->LBD16              <---------WRKY18(1)         <-----------ARR10         <---------ARR11(1)                                  ==============================HOX2a_HOX2a         --------->ARR11(3)                                  ------>ZmHOX2a(2)         --------->ARR14(2)                                 <------ZmHOX2a(2)       =================         <---------ARR11(3)                                 ===============================HOX2a_HOX2a         <---------ARR14(2)                                <---------ARR14(2)       =================        <---------CCA1(2)--------->At5g28300            <---------HSFB2a(2)         <------ZmHOX2a(1)        <---------ARR14(1)                              --------->HSFB2a(2)   <---------ANAC58 ---------ZAT14       <---------LBD16            <-----------------AGL1       <---------ANAC58      - ---------ZAT18   <----------DOF2            --------->HSFC1(2)        --------->ANAC46<---------ALFIN1 -------->ZAT14  <---------DAG2          --------->ANAC46  --------->ARR14(2) <---------ANAC46<------   agtgaacaccatatcttgacctttcccggtgaaaatgtcgaacacgacgtttctcgttctggatccaaactcaacgccttgagtgaggagcacttccttt  13002500               --------->ATERF1(1)        --------->ALFIN1       <---------MYB52(1)       <-----------HVH21      --------->LBD16    <---------LBD16    ------>ZmHOX2a(2)    ===============HOX2a_HOX2a   --------->CCA1(2)   ================HOX2a_HOX2a   <------ZmHOX2a(2)                           ==================HOX2a_HOX2a   --------->ARR14(1)                     --------->ANAC46  --------->ARR11(3)                     --------->SPL7  --------->ARR14(2)                <------------------SPL14 --------->DEAR3(1)                <-----  <---------ARR14(2)              ------>NtERF2<------ZmHOX2a(1)         <---------ANAC58     <------  --------->AGP1                 --------->WRKY12         ------>ZmHOX2a(2)                   -------  --------->ARR11(1)             --------->WRKY38(1)     <------ZmHOX2a(2)                   <------- =========HOX2a_HOX2a          --------->At4g35610==============HOX2a_HOX2a                  -------- ==========HOX2a_HOX2a     --------->ARR14(2)  =================HOX2a_HOX2a                 <-------- ---------->ARR10   ------>NtERF2----------->HVH21===============HOX2a_HOX2a            --------->MYB52(1) ----DOF2   <------ZmHOX2a(1)  <---------At4g35610<------ZmHOX2a(1)      <---------ANAC58<---------At5g28300   gttagatccggtgaggagacgacgactaggtttcgctgacccatacggaggaggaagagatcgccgaatttcttagcgtaatcgacgagattacggtggt  13002600                                                                              --------->LBD16                                                                             <------NtERF2                                  =====================HOX2a_HOX2a           <----------CDC5     --------->At4g35610          ------>ZmHOX2a(2)                         --------->At4g35610  <------ZmHOX2a(2)              ======================HOX2a_HOX2a          <---------At4g35610 <---------ARR11(3)              <------ZmHOX2a(2)                          --------->LBD16 --------->ARR11(3)             <---------ARR11(3)                          ------>NtERF2          <- --GAMYB                        --------->ARR11(3)                          <---------LBD16        <- ---MYB46(3)                    --------->ARR14(2)                         <---------ANAC46        <- -->MYB55(2)                --------->LBD16                 <---------At4g35610    <----------DOF2<-- --AtMYB61                <---------HSFB2a(2)               --------->At4g35610<------NtERF2     ---- ->ALFIN1      ---------->DOF2  <---------ARR14(2)        <--------P  <---------ANAC58          ----- -MYB52(1)------>NtERF2 --------->ARR14(2)      <------ZmHOX2a(1)     <---------ANAC58      <--------   tgagatcatctccgacttgaagccagtttccgaagatcggaattggtataggacctggaggtagcttcaatttcttgccgcggagctttgaaatcaccgt  13002700          ------>NtERF2          --------->ABI4(1)                                                    <---------ARR11(3)         --------->ANAC46                                                      --------->ARR11(3)         --------->DEAR3(1)                                                   --------->YAB1         --------->DREB2C(2)                                                 <---------ATHB12       <---------At5g28300                                               --------->LBD16    <-----------ARR10                                                   --------->ANAC58 --------ANAC58                                                         --------->ANAC46 --------ANAC46                                                      ------->TEIL --------ANAC58                                                      --------->ARR14(2) ----NtERF2                 ---------->DOF2          <-------TEIL    <---------ARR14(2) ----->REM1(2)        <------NtERF2     --------->ANAC58 --------->YAB1 --------->ANAC58      ------- ---->ALFIN1        <---------DEAR3(1)  --------->ANAC58<---------YAB1 <---------LBD16      <-------- -At5g28300  ------>NtERF2 --------->AHL20(2)   <------ZmHOX2a(1)   <---------CCA1(2)     <----------   ggcgagaatcaccgccacgaagacggcgattaaagacttctccagcaagaggaggtccattatagtttgtgtatccgcaatgatattgtttttttccggt  13002800                                            <------ZmHOX2a(1)                                          <---------TOE2(3)                                      --------->At4g35610                                     <------MYB46(1)                                      <---------At4g35610                                     <------                                      --------->ZAT2                                          <------MYB83                                   --------->HSFC1(2)                                        <-------                                   <---------HSFC1(2)                                       <--------P          <------NtERF2            --------->At4g35610                 <---------AHL20(2)  <-------GAMYB         <---------DEAR3(2)        <---------At4g35610                <-----------TBP     <---------MYB46(3)        <---------DEAR3(1)        --------->GLK1(2)                 <---------ARR11(3)    <------MYB46(1) -->LBD16------>NtERF2    --------->At4g35610  *TSS                 --------->ARR14(2)    <------MYB83 -LBD16 <---------At1g77200  --------->At4g35610                    <---------ARR14(2)   --------->MYB59 -GT1 <-----------HVH21---------->DOF2<---------ZAT2---------->DOF2<------ZmHOX2a(1)     <---------AtMYB61   gagaaaatcgtcggcgagagtaattgaaagcagaagaagctgctgaggaagaaataaagaagggagagaggattttataagagggagaggtttggttggt  13002900                                           --------->ALFIN1                                         <---------ANAC58                                         <---------ANAC46                                         <---------ANAC58                                         ===============MYC_MYB                                         <---------TGA1a                                        <-------TEIL                                     <------MYB83                                     <------MYB46(1)                                    --------->MYB52(2)                                             --                                    --------->MYB46(2)                                           ----                                    --------->MYB59                                            <-----                                  <---------MYB52(1)                                           <-----                           --------->MYB52(1)      <------MYB83                                ------                      --------->DAG2--------->MYB111(1)   --------->ATHB12                     <-----                ===================================MYC_MYB--------->YAB1                       <-----                ------->GAMYB    <-----------HVH21 <------MYB46(1)                     --------->ANAC55(2)              ------>MYB83 <---------DOF5.7(2)    <---------MYB46(3)                  <---------TOE1(3)              ------>MYB46(1)    ==================bZIP_DOF                           <---------TOE2(3)         <------ZmHOX2a(1)<---------WRKY12--------->TOE1(2)                          <-----------GT1     --------->ICU4 ===============================bZIP_DOF                <---------ANAC46    <-----   --------->CCA1(2)---------->DOF2<---------MYB55(1)    --------->ICU4    ----------->GT1  <-------- ---MYB46(3) --------->MYB52(1)  <----------DOF2 <--------P             --------->ANAC46  --------->ATHB12 --AtMYB61  --------->AtMYB61--------->ANAC46   <-------GAMYB         --------->MYB52(1) <---------YAB1   ttgagaaatgaggaccaacggcaaaaggtaaacggcgttaggtacgtgggagttggtgaatgatgagataataaacggcgttaaatttaacgtgattgcg  13003000                                     <------MYB83                                     <------MYB46(1)                                 <------ZmHOX2a(1)                                     ----------->GT1                                <------MYB83                                    --------->MYB59                                 <------MYB46(1)                                    --------->MYB111(1)                            --------->MYB111(2)       --------->ALFIN1             --------->MYB46(2)                         <---------TOE2(3) ------->ALFIN1                     --------->MYB111(2)                        <---------TOE1(3) ----->ALFIN1          <---------MYB46(3)   ---------->DOF2                 <---------REM1(1) ----ANAC55(1)      <---------MYB46(3)  ---------->DOF2                   <---------ANAC46 ----ANAC55(2) <------MYB46(1)     <--------P                             <------MYB83  <------ZmHOX2a(1) --->ANAC55(2) <------MYB83        <---------MYB55(1)                     <------MYB46(1) ----ANAC58 <---------ANAC58     <---------MYB46(3)               --------->DAG2  <--------P ----ANAC58 <---------ANAC58     --------->MYB55(2)              ---------->DOF2 --------->TOE1(2) ----ANAC46 <---------ANAC46    <---------AtMYB61           ------->TEIL --------->MYB46(2)         - -WOX13(1)<---------PCF2     <---------AtMYB61       ---------->DOF2     <---------MYB46(3)<------ZmHOX2a(1)   tgtgtgtgagtggggcttggtgttgttgttgatggtggtaggtaaagaaagaccacaaagtgtatgtaaaagtgtttggtgaaggtaggaggaggatgtg  13003100                                                                                            ---------                                                                                           ------>MYB46(1)                                                                                           ------>MYB83                                                                                          -----------                         <---------ARR11(3)                                             --------->MYB46(3)          <---------ARR11(1)                                                       --------->YAB1         <---------CCA1(2)    <----------DOF2                                     --------->ZAT6      <-------TEIL       --------->ARR11(3)                                      <---------TOE2(3)   <---------YAB1    ---------->DOF2                        --------->MYB52(1)  --------->YAB1------- -------->GLK1(2)<-----------GT1      <-----------GT1    <---------TOE2(3) <---------YAB1------->GAMYB   agattatgttcatatctattaactaaagttctctttgtattttctatttcagtggaattaagaaacgactaaatatgctcattaacaataaccaacaaaa  13003200                                                                       --------->YAB1                         <---------ANAC58                           --------->YAB1               ---------->DOF2                                     <---------YAB1   --------->TOE2(3)     <---------ANAC46                        --------->YAB1   ----------->GT1       <---------ANAC58                       <---------YAB1                     <-  ----------->GT1   --------->MYB111(1)                     --------->AHL20(2)                   <--- >MYB46(3)   --------->ANAC58                           --------->AHL20(2)                       <--- >RAV1(1)    --------->ANAC58      --------->YAB1    ----------->GT1<---------ICU4         --------->ZAT14 --->DOF2  --------->MYB52(1)   --------->YAB1      ----------->GT1--------->ICU4          <---------ZAT14   gaaaatgttaaaaaaacgaaagtagttgcttcaaaaatcatatgaataagtgaggggataaattatatcataatcatattctaacatagatagtatagta  13003300  Previous    Next  AGI:  At2g30490.1    Description:  ATC4H/C4H/CYP73A5 (CINNAMATE 4-HYDROXYLASE, CINNAMATE-4-HYDROXYLASE); trans-cinnamate 4-monooxygenase. Identical to Trans-cinnamate 4-monooxygenase (CYP73A5) [Arabidopsis Thaliana] (GB:P92994;GB:O04995;GB:O49834;GB:P92993); similar to CYP98A3 (CYTOCHROME P450, FAMILY 98, SUBFAMILY A, POLYPEPTIDE 3), monooxygenase/ p-coumarate 3-hydroxylase [Arabidopsis thaliana] (TAIR:AT2G40890.1); similar to cinnamate 4-hydroxylase isoform 1 [Brassica napus] (GB:ABF17873.1); similar to cinnamate 4-hydroxylase isoform 2 [Brassica napus] (GB:ABF17875.1); similar to cinnamate-4-hydroxylase [Brassica rapa] (GB:BAF81522.1); contains InterPro domain Cytochrome P4 Range:  from: 13000740    to: 13002847    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version