Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                ------>ZmHOX2a(2)                                            --------->ARR14(2)     --------->LBD16                        <---------ARR11(3)     ----------->HVH21                      --------->ARR11(3)   <---------LBD16                          <---------AGP1 ----->MYB83                                --------->AGP1 ------->P                        --------->YAB1        <----------DOF2 ----->MYB46(1)               --------->ICU4--------->ARR14(3) -------MYB46(2)          --------->At5g28300<------ZmHOX2a(2) -------MYB111(1)        ----------->GT1    <---------ARR14(2) -------MYB59        <---------TOE2(3)      <---------ARR14(3)          ----------->HVH21 ------------->AGL1  <---------TOE1(3)     <---------CCA1(2)          <---------ANAC55(2)      ------ --------------AGL1 ---------->DOF2      --------->HSFB2a(2)    --------->DOF5.7(2)--------->ANAC58 --MYB59          ==================================HOX2a_HOX2a<-------GAMYB       --------->ANAC58 ->AtMYB61        ===================================HOX2a_HOX2a<---------MYB52(1) ----------->GT1 --DAG2           ------>ZmHOX2a(1) --------->At4g35610 <---------DAG2--------->ANAC55(2)    --------   cctactccggacatgttgtccttaaggctgtaaaaatcagcatccagatcttgcattcctttttccgttaacaagtgacacaaacaagaaaaatgcaaag  12999400                                                                     <---------HSFB2a(2)                                                                     --------->HSFB2a(2)                                                                   --------->At4g35610                                                                   <---------At4g35610                                                                   --------->ZAT2                                                                   <---------ZAT2             -------       --------->ANAC46                ----------->GT1        <---------YAB1            --------->ARR14(2)     <---------ANAC55(2)           <---------AHL20(2)       --------->YAB1              <---------ARR14(2)     --------->ANAC55(2)          --------->AHL20(2)        <---------ICU4           --------->YAB1   <-----------GT1                <---------AHL20(2)       <---------ATHB12        --------->ANAC58 ----->GT1                 --------->DAG2                  <---------ATHB51        --------->ANAC58 -->DOF2<-----------HVH21 ---------->DOF2 <-------TEIL     --------->ICU4   --------->YAB1   <-------   tgaaattacatgtcatggttctgagcgataaagcaaataaatggttcataaactgactccaattatgactgctggaagtcataacaagcatatacttacc  12999500                                                                       <------MYB46(1)                                                                --------->LBD16                                                            --------->ARR14(2)                                    <---------ETT(2)        --------->ARR11(3)                                    ----------->HVH21       <---------ARR14(2)   <---------HSFB2a(2)            <-------GAMYB            --------->GLK1(1)   --------->HSFB2a(2)    <------ZmHOX2a(1)               <---------KAN4(2)  <---------LBD16      <-----------RAV1(2)     <---------At4g35610     <------MYB83           <------ ->P         <---------HSFB2a(1) <---------MYB46(3)       ---------->TaMYB80            --------->ICU4 ----GT1<-----------RAV1(2)     <---------ANAC46       <---------TOE2(3)                <---------YAB1   attttctggaccagaaggtttgcattcaggagtagcggttgacaaattcagcaaattgagaatatccagagattggtgttctcttaagtgttgattacta  12999600                                   <---------ZAT14                                   --------->ZAT14                              --------->ZAT2                              <---------ZAT2                             ------>MYB46(1)                             --------->MYB52(1)                                               -------                 <---------At4g35610                                --------->ARR11(3)     ----------                 --------->At4g35610 <---------At4g35610            --------->AHL20(1)   <-------TEIL          <---------ICU4     ------>MYB83                    <---------At4g35610    <-----------RAV1(2)       --------->YAB1      <---------MYB59                ------>ZmHOX2a(1)         =================       <---------ICU4     --------->ANAC58       <---------At4g35610<---------AHL20(1)--------->At4g35610      <---------YAB1      --------->ANAC46    <-------GAMYB  --------->At4g35610  <-----------HVH21 ---YAB1 <---------YAB1   --------->ANAC58   <-----------RAV1(1)    <---------ARR11(3)<---------At4g35610   ttgtttatatcattactacagctctcagacccaactgtgaactgatgctgttgctgtctcctctgctcaaaatattgtttttgccttcaggtgcaacaaa  12999700                                                                                                  ---                                                                                                -----                                                                                              -------                                                                                            <--------                                                                                            <--------                                                                                            ---------                                                                                            <--------                                                                                            ---------                                                                                            <--------                                  <---------At4g35610                                       <--------                                  --------->At4g35610                                       <--------                 --------->YAB1 <-------MYC2                                         --------->ZAT14     --------->AHL20(2)         ------->MYC2                               <---------ALFIN1 <--------     <---------AHL20(2)    --------->ANAC58             <----------ID1     --------->ANAC46 ========= --->DOF2      --------->ANAC58 ------->MYC3       ---------->DOF2  <---------At4g35610  ----------->TGA1 ->RAV1(1)     --------->ANAC58 <-------MYC3<---------ARR11(3)      --------->At4g35610  ----------->HVH21 ==RAV ---------->DOF2     --------->ANAC58 --------->ARR11(3)    <------ZmHOX2a(1)  <---------ZAT14   gatgaaattaaaagtgtaagcacaatgggaagcatatgctgacaaacatctcataaagagaacaagaaggagcttacacacctcttcttcactgacgtgt  12999800   --------->ATHB12 <---------WOX13(1) -------->HVH21 ---->ALFIN1           --------->LBD16 -->ALFIN1            --------->HSFB2a(2) -ANAC55(1)           <---------HSFB2a(2) -O2                 <---------LBD16 >TGA1a         --------->HSFB2a(1) -TGA1a         <---------HSFB2a(1) >O2*TSS       --------->DAG2 -ANAC58 --------------->AGL15            --------->ICU4             --------->ANAC58 -ANAC46 <---------------AGL15       --------->ANAC58                --------->ANAC58 -bZIP60(2)  ---------->DOF2------------>CBF                   >>>>>>>>>>GT-3b -ANAC58<-----------------AGL1       --------->ANAC58     <---------YAB1 =======================bZIP_DOF --------->YAB1         --------->YAB1      <-----------GT1   gtgactgattaccccaaaaggttcccagaaaacaataacaagtcaaaatgaaaacaaattataagaaaaataagctattatcccaacaccaagaggtttt  12999900                 ------->GAMYB              <-----------GT1                                                      <------ZmHOX2a(2)              --------->MYB52(1)                   --------->DAG2               ----------->ARR10           --------->YAB1                         ---------->DOF2           ------>NtERF2    --------->ANAC58                          <----------ID1           <----------DOF2------>ZmHOX2a(1)    --------->ANAC58                       ---------->DOF2     <---------At4g35610<---------ARR14(2)    --------->ANAC46                   <---------------AGL15   --------->At4g35610--------->ARR14(2)  <---------ALFIN1 ------->TEIL       --------->ZAT6      ----------->HVH21--------->ANAC46   agcttcaccccatttataacggacctctgaatttgaaatatcactaaaaggaaaaagtcactcacagcggctactttccgcctcgatcctcccatccatt  13000000                                                                               ------>NtERF2                                                                              --------->DEAR3(1)                                                                            ------>NtERF2                                                                            <---------ATERF1(1)   ---                                                                           --------->ANAC46       ---                   <---------ARR14(2)                 <---------ARR11(3)   --------->ANAC58       ---                   --------->ARR14(2)         <---------ZAT18              --------->ANAC58     <----                  <---------MYB52(1)          --------->ZAT18              --------->bZIP60(1)  -----                 --------->LBD16              --------->ZAT14    --------->AHL20(2)--------->ANAC58               <---------LBD16                <---------ZAT14    <---------AHL20(2)<---------MYB52(2)             <---------ARR14(2)         --------->SPL7--------->ARR11(3)   --------->bZIP60(2) ------             --------->GLK1(2)      <---------------AtSPL3      --------->AHL20(2) --------->ANAC58 <   gcagcattcgtagaaattccggttcttagagttttcaaattgtacgactgcacaaagatttcgaaattaaaatttcgacgccaccacgaacaattcgacc  13000100                                                                                              -------                                                                                       <---------HSFC1(1)                                                                                       --------->HSFB2a(2)                                                                                       <---------HSFB2a(2)                                                                                    --------->AGP1                                                                                    --------->ARR11(3)                                                                                    <---------ARR11(3)                                                                                    <---------AGP1                                                                                    <---------ARR14(2)                                                                                    --------->ARR14(2)                                                                                   <---------CCA1(2)                                                                     ==================HOX2a_HOX2a     ----------------->AGL3                                          =======================HOX2a_HOX2a     ----------------->AGL2                                          ========================HOX2a_HOX2a ------>MYB52(1)                                                     ------>ZmHOX2a(1)------>ZmHOX2a(2) --->MYB46(1)                                                       --------->TOE2(3)<------ZmHOX2a(2) --->MYB83                                                     ========================HOX2a_HOX2a -----MYB55(2)                                                 ------>ZmHOX2a(1)<------ZmHOX2a(2) ---->MYB46(3)                 --------->WOX13(1)              =============================HOX2a_HOX2a --->ANAC46        <---------ANAC58                          --------->YAB1    <-----------HVH21   -- ---------ATHB12   <---------ANAC58            ----------->GT1 ==============================HOX2a_HOX2a   caacgattccataactaggttgcgattcactatcaattagtcactgagactgaaaattttgaatcctaatcctaaatttccgatcagatctagaagaatc  13000200                                                                         <---------HSFC1(1)                                                                         <---------HSFB2a(2)                                                                         --------->HSFB2a(2)                                                                    --------->HSFB2a(1)                                                                    --------->HSFC1(2)                                                          <---------ARR11(3)              --------->At4g35610                                                          <---------AHL20(1)             <---------ARR11(3)                                        <---------HSFB2a(2)<---------AHL20(2)            --------->ARR14(2)                                      <-------TEIL---------->DOF2   <---------HSFB2a(1)  --------->GLK1(2)                                     --------->CCA1(2)    --------->ARR11(3)      ----------->HVH21               <---------GLK1(1)    --------->ARR14(2)    --------->AHL20(1)  --------->HSFB2a(1)            --------->ANAC46        --------->ARR11(1)   --------->CCA1(2)    <---------HSFC1(2)            --------->ANAC58        <---------GLK1(2)   --------->ARR11(3)    <---------HSFB2a(1)  <- -->GLK1(2) --------->ANAC58        <---------ARR14(2)  <---------ARR11(3)    --------->HSFC1(2)   <- --------->GT1 --------->GLK1(1)<-------TEIL   <------ZmHOX2a(1)    <---------HSFC1(2)   <---------ARR14(2)   taggtaaaatttctacgaaatccctcaaaaaacatacagattcgagagaggagaaagagatatatttagaaaattcgagaagcttcgacagtatctgaat  13000300  Previous    Next  AGI:  At2g30480.1    Description:  similar to hypothetical protein [Vitis vinifera] (GB:CAN65091.1) Range:  from: 12994173    to: 12999804    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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