Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                               <------NtERF2                                            ------>NtERF2                                           <---------ETT(2)                                           --------->ETT(2)                                         <-----------HVH21                                      ----------->RAV1(2)                                      <---------ANAC58                                      <---------ANAC58                     <------ZmHOX2a(2)                                  <---------ANAC46                        --------->AGP1                                  --------->ANAC55(2)                     --------->ARR14(3)                                  <---------ANAC55(2)                     --------->ARR11(3)                                  <---------TGA1a                         <---------ARR14(2)                                  <---------ANAC58                        <---------ARR14(3)           <---------AHL20(2)     ==========================================bZIP_DOF     <------MYB83        <---------AHL20(1)        <---------ANAC58                        --------->ARR14(2)      ---        --------->AHL20(1)        <---------ANAC55(1)                     <---------ARR11(3)     ----        <---------ARR11(3)      <-----------GT1------>NtERF2            ----------->ARR10<------MYB46(1)   <------ZmHOX2a(2)  ----------->GT1------->TEIL                ---------->DOF2        --------->MYB59  <---------ARR11(3) >>>>>>>>>TBF1<---------bZIP60(2) --------------->AtSPL8------>ZmHOX2a(2) -------   actagatcaatatataaacagaagaagaaaaatgttacgtgcctgtcgccaacaagtctgtacattctaaagatgagatcttcttcttgttcggtcatat  12976900                                                                                        <---------AHL20(2)                                                                                       <---------AHL20(2)                                                                        <-------TEIL   --------->AHL20(1)                                                                        ------->TEIL   <---------AHL20(1)                                                                    <-----------------------TaNAC69(2)                                                                    --------------->AtSPL3         <-                                                                    --------------->AtSPL8        ---                                                           <---------YAB1--------->REM1(1)    <------ ------>YAB1                                  <---------AHL20(2)    <---------------AtSPL8<---------TOE2(3) ------->GT1                                  --------->AHL20(2)    <---------------AtSPL3<---------TOE1(3) -->ICU4                                ----------->GT1  --------->RVE1(1)             --------->AHL20(2)   tgataaactcccatttcatactactcacttctgcattttagttagtatataaattcaaaatatcagtgaaaacgtacatcacaaaacaatttaatgttac  12977000                                                                                        <-------GAMYB                                                                                --------->ZAT18     <---------ATHB12                                                           --------->ZAT14 <---------WRKY12                                                               <---------ZAT18 <---- ----------HVH21      ---------->DOF2   <---------GLK1(1)                       <---------ZAT14 ----- ------>ANAC46      --------->AtMYB61   --------->GLK1(1)                  <---------YAB1<--------P -----GT1       --------->WRKY38(1) --------->YAB1    ---------->DOF2    --------->CCA1(2)<---------MYB46(3)   aggtcaaatgaatgagcgtagaccaaaaggaagaacaattagatttccaactaaatcaaagacaaaccttgagagctatgagtgaacttgggttgtttat  12977100           <---------ANAC46          <------NtERF2          --------->RAP2.3(1)         ------>NtERF2         <---------ATERF1(1)         <---------ERF1         <---------DEAR4(2)         <---------RAP2.3(1)         <---------ORA47(2)        <---------RAP2.3(3)        <---------RAP2.3(2)        <---------RAP2.6(2)        <---------DEAR3(1)       --------->ATERF1(1)                                                                    -------   --------->ZAT14                                                          --------->ATHB12  <------ -----YAB1--------->ATERF1(1)    <---------MYB52(1)                        <---------AHL20(2) ------- ------>HVH21           <---------ZAT6                                     <---------YAB1    --------   gacagtgaaggcggcgaagacggtttgtgttatccattagtatgtattggaaacagcgaaacagtatgaacacaaatattattgagagaaacaaaaaaaa  12977200                                                                                                  ---                                                                                  ------>ZmHOX2a(1)<- -->AHL20(1)                                                              <---------ALFIN1        --- ---AHL20(2)           ---------->DOF2                                   <---------ALFIN1   --------- -->AHL20(2)    --------->ANAC58                            ---------->DOF2    ---------------------- ->AHL20(2)     --------->ANAC58                  --------->REM1(2)  --------->PCF5   *TSS-----------   ttggagtttggagaatgcaagcgaagaaagagatgtgaggtttacaaaactatgtagagacacaaagagaggtccccaactctcctacttggccacataa  12977300                        --------->AtMYB61                     --------->REM1(1)                     --------->ANAC58           ----------->GT1               <------ZmHOX2a(2)         --------------->AGL15              <---------AHL20(2)               <---------ARR11(3)        <-----------------AGL3             <---------AHL20(2)               <---------At4g35610 ------>TOE1(3)      --------->ANAC58      --------->AHL20(2)               --------->At4g35610 ---------DOF2      <-------TEIL       --------->AHL20(1)             ---------->DOF2               < ------>TOE2(3) --------------->AtSPL8 --------->AHL20(2)          --------->ANAC58                 < >bZIP60(2)     --------------->AtSPL3 <---------AHL20(1)          --------->ANAC58              <--- ->TaNAC69(2)   <---------------AtSPL8 <---------AHL20(2)      <---------HSFB2a(2)               ---- >RAV1(1)<---------------AGL15        --------->AHL20(2)       --------->HSFB2a(2)              -----   cctttaacttacaaaatataggtacaccataacttactgaataaattaaatgctaaaactaattttcagaagcaaagcagatcacaaatacaaacatttt  12977400                                                                                  --------->YAB1         <---------YAB1      --------->YAB1                                 <---------ANAC55(2)        <---------ARR11(3)   -------->HAHB4                           --------->AHL20(2)       --------->GLK1(1)    <---------YAB1                            <---------YAB1       <---------GLK1(1)  <---------ICU4                              <---------AHL20(2)           --   <---------TOE2(3)      --------->YAB1                           <---------ARR11(3)             <-- ---------AHL20(2)       --------->ICU4                            --------->AHL20(1)          ------ ---------ATHB51         <---------YAB1                            <---------AHL20(1)          <----- ------AHL20(2)        --------->YAB1    <---------YAB1      <-----------GT1--------->ANAC55(2)------ ----->AHL20(2)     ----------->GT1 <-------TEIL<-----------RAV1(1)--------->AHL20(2)          <----- ---->AHL20(2)    <----------DOF2  --------->AtLEC2      --------->YAB1  <---------YAB1    <------ZmHOX2a(1)   aaattatggatatcattccactttgtaataataatacatgcatatgatatatgttgtatttataaacgatatattattatgtattcaaaatgaggaattt  12977500           <---------YAB1          <---------AHL20(1)          <---------AHL20(2)        <---------AHL20(2)        <---------YAB1     --------->AHL20(2)     --------->AHL20(1)     <---------AHL20(2)     <---------AHL20(1)  --------->AHL20(2)                                                   --------->YAB1 ------->YAB1                                                         <---------AHL20(2)          <-- -------YAB1                                                         --------->AHL20(2)          <--- --->AHL20(2)                                   <---------CCA1(2) <----------DOF2              <----- ----AHL20(1)                               <-----------GT1    <-----------GT1                 ------ --->AHL20(1)                             <---------AHL20(2)  <---------CCA1(2)         ---------->DOF2 ----AHL20(2)<---------AHL20(2)    ----------->GT1         <----------DOF2   <----------DOF2 --------   attataaaatattatttttttgtttgcaatttgtatgtagttattttttcttatcttgcaacttttatctttttaataactttgatggaacaaagtggat  12977600                                                 --------->HSFB2a(2)                                            <----------DOF2                                          <----------DOF2                                       --------->LBD16            --------->AHL20(2)                                      --------->ANAC46         --------->YAB1                                   <---------ARR14(2)        ------->TEIL                 -----------           --------->TOE2(3)       --------->ARR14(2)     <---------YAB1                  <----------      <---------AHL20(2)          <----------TaMYB80    --------->CCA1(2)                ------------ --------->AHL20(2)               --------->GLK1(1)    --------->ARR14(2)        ------>ZmHOX2a(2) -------ANAC55(2)                 <---------GLK1(1)    <---------ARR11(3)        <---------LBD16 ----TEIL --------->YAB1          <---------CCA1(2)    --------->ARR11(1)      --------->ARR14(2) ----ARR14(2)       <------ZmHOX2a(1)<---------LBD16   <---------ARR14(2)      <---------ARR14(2)<--- --->ARR14(2)   --------->TOE1(2)---------->TaMYB80    --------->ARR11(3)    <---------YAB1    ------ --->GT1 >>>>>>>>>MYB98       ----------->GT1    <---------HSFB2a(2)   <-------TEIL--------->LBD16   acataaattttaacataaactaggaaactatatagtatatccggctcttttgtagaagatatgaatcataaaatacattctgatccggcaaactaaaaaa  12977700                                                                                   <--------ATHB1                                                          ----------->HVH21        --------->ATHB51                                               ----------->RAV1(1)                 <---------ICU4       --------->YAB1                         --------->ANAC46                     --------->YAB1 ---->AGL15       ------>MYB83              --------->ANAC46                      <---------ATHB51 -----AGL15       ------>MYB46(1)           --------->ANAC58            ---------->DOF2 ----->AGL3     <---------MYB59             --------->ANAC58    <-------TEIL      --------->ICU4    < ------------AtSPL8     ---------->DOF2    <-------TEIL <---------ANAC55(2) <------ZmHOX2a(1)       < ---->DOF2      <---------MYB46(2)<---------MYB46(3)    --------->ANAC55(2)<----------ID1           <   aggaacgaattatagataccaaacaaaaaagcctagttgttgacatacacaacaaaatatgtgacatacagaaggaaaggacgaataattgttttggaat  12977800  Previous    Next  AGI:  At2g30432.1    Description:  TCL1 (TRICHOMELESS1); DNA binding. similar to DNA binding [Arabidopsis thaliana] (TAIR:AT2G30424.1); similar to Myb-related TRIPTYCHON-like protein [Vitis vinifera] (GB:ABW34395.1); contains InterPro domain Myb transcription factor (InterPro:IPR015495); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain SANT, DNA-binding; (InterPro:IPR001005); contains InterPro domain Myb, DNA-binding (InterPro:IPR014778) Range:  from: 12975692    to: 12977286    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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