AthaMap TU-Logo
Search
 
   Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
Go to graphical and table display 

1        10        20        30        40        50        60        70        80        90        100 
                                                             <---------ANAC58
                                                             <---------ANAC46
                                                        <------MYB83
                                                        <---------ANAC58
         ------>NtERF2                                  <------MYB46(1)
<---------ZAT18                                         <---------ANAC58
---------ANAC58       ----------->GT1                  --------->MYB59
---------ANAC46      --------->DAG2                    --------->MYB46(2)      <----------DOF2   ---
---------ANAC58---------->DOF2                         --------->MYB111(1) <-----------GT1       <--
-------->ANAC55(2)  ---------->DOF2               <---------AHL20(1)    --------->ANAC58       <----
---GAMYB--------->ANAC46                          --------->AHL20(1)    --------->ANAC46   <--------
------------------>TaNAC69(2)                    <---------AHL20(2)     --------->ANAC58   <--------
>ZAT2   --------->ANAC58     --------->GLK1(2) --------->AHL20(2)---------->ARF1         --------->GLK1(2)
-ZAT2   --------->ANAC58 <-----------GT1 ----------->RAV1(1) <---------ANAC58 <---------DAG2   <----
 
ttgcgcattccacgccttcaaagtaaagtaacaatctgagacaacaacatatatatattaggtgccttgtctcacaagtcaccttttatgaaattcttgt  12922500
                                                                                                  <-
                                                                                                  <-
                                                                   --------->ANAC58               --
                                                             <------ZmHOX2a(2)                    <-
                                                            --------->ARR14(2)              --------
-------->HVH21                                              <---------ARR14(2)     --------->ANAC58
--------ARF1                                             ------>ZmHOX2a(1)        --------->WOX13(1)
-----ANAC58          <-----------GT1   =============================HOX2a_HOX2a   --------->GLK1(1)-
-ANAC58           ----------->GT1      <------ZmHOX2a(1) --------->HSFB2a(2) --------->ALFIN1 <-----
-ANAC58        <---------AtLEC2  ---------->DOF2     --------->AtMYB61    ------->TEIL--------->TOE1(2)
-----ANAC58<----------DOF2   --------->YAB1       <---------ALFIN1 --------->ANAC58--------->ANAC58<
 
gtgacaagtcttctctttgcattgtaacaaaataatcaaagaggaagagagagacacctcctcgatccacaagaacgaatgtgggcaatccagcgactct  12922600
                                                                              <---------ANAC58
                                                                         <---------ARR14(2)
                                                                       --------->LBD16
                                                                       ----------->HVH21
                                                                     --------->At4g35610
                                                                     <---------At4g35610
                                                                    --------->MYB52(1)
                                                                   <---------ALFIN1
                                                                  --------->ZAT14
                                                                  <---------SPL7
                                                                  <---------ZAT14
        <---------GLK1(1)                                         <---------ABI4(2)
        --------->GLK1(1)                                         --------->ABI4(1)
   ---------->DOF2                                               --------->AtMYB61
------>ZmHOX2a(2)                                                <---------ALFIN1
--------AGP1                       --------->ANAC58              --------->DEAR3(1)
--------ARR11(3)                   --------->ANAC58             --------->ANAC46
------->ARR14(2)             <---------ANAC58                 --------->AtMYB61      <---------ANAC46
--------ARR14(2)           --------->ARR11(3)                 <---------ALFIN1<---------ANAC58   ---
->GLK1(2)                  <---------ARR11(3)                --------->MYB46(3)    --------->LBD16--
-------->At4g35610     ---------->DOF2    <---------YAB1     <---------MYB55(2)    ------>NtERF2 ---
----LBD16  --------->TOE2(3) <---------ANAC58          <------ZmHOX2a(1) --------->ARR14(2)     ----
---------At4g35610  --------->TOE2(3) <----------DOF2<---------TOE2(3)--------->DEAR3(1)      <-----
 
ggatctgaaagaaatctcaaaatcgtcaaagttcttgcaagctttctgattagttttaggataaaccaccgcaccggacatgcttccgccgtattgaggg  12922700
                                                                                     ------>MYB83
                                                                                     ------>MYB46(1)
                                                                                  --------->MYB46(3)
                                                               <---------MYB46(3) --------->HSFB2a(1)
                                            --------->LBD16   <--------P          --------->HSFC1(2)
                                            ------>NtERF2   <---------MYB46(3)    <---------HSFB2a(1)
                                           <---------DEAR3(1)<-------GAMYB        <---------HSFC1(2)
------>ANAC58        --------->YAB1       <---------LBD16  <---------TOE2(2)     ------->TEIL
---->NtERF2         <-------TEIL    <---------WOX13(1)     <---------TOE1(2)   ------->GAMYB
------>ANAC58 <---------ZAT18    ----------->HVH21     <---------LBD16        --------->MYB46(3) ---
----->SPL7    --------->ZAT18  <---------At4g35610<-----------HVH21           <---------MYB52(2) ---
----SPL7  --------->LBD16      ------>ZmHOX2a(1) --------->bZIP60(2)     --------->ANAC46   <-------
 
acgccaaaatttccgagggcacattcatagactcctctgatggactccggcgaagtcactcggaggttgttcttctccacaacgaacctccctgtgcatg  12922800
           <---------MYB52(1)
       ------>NtERF2
      <---------ALFIN1
    <---------ALFIN1
    --------->AtMYB61                                            <---------ARR11(3)
   --------->ANAC58             -------->P                 --------->ANAC58
   --------->ANAC46            <-----------GT1<---------SPL7------------>CBF
   --------->ANAC58            --------->MYB52(1)          --------->ANAC58
 --------->AtMYB61           --------->MYB46(3)       <---------ICU4
 <---------ALFIN1            <---------MYB52(2)      --------->ICU4
---->TEIL  --------->DOF5.7(2)------->GAMYB ---------->ID1 --------->ANAC46
------>GLK1(1)          --------->YAB1   <-------TEIL<---------YAB1 <---------DAG2               ---
--AtLEC2  <-----------HVH21  <---------MYB111(1)  ------>ZmHOX2a(1) <----------DOF2              <--
 
aactccaccccaccgttacccatactattacaactaaccatacattcgtcgtcctcatgatcacacaataacttttttgagagttgatttcgaaatactc  12922900
                                            --------->TOE2(3)
                                           <---------ICU4
                                           --------->YAB1
                                           -------->ATHB1
                                           <--------HAHB4
                                           --------->ATHB12
                                          --------->ICU4
                                          <---------ATHB12
                                         ------>MYB83
                                      ------------>CBF
                                    <---------WRKY18(1)
                                   ----------->HVH21
                                 <---------ANAC58
                             <XXXXXXXXXXXXXXXXXXXXMIR3440B-3P
           --------->At4g35610   <---------ANAC58   <------------CBF      ------------>CBF
          --------->ANAC58 <---------HSFC1(2)  ---------->DOF2          <---------ZAT18
          --------->ANAC58 --------->HSFC1(2)<---------YAB1    <<<<<<<<<WRKY18 <---------ICU4
--------->CBF            --------->DAG2  ------>MYB46(1)     <-----------HVH21 --------->YAB1
-------YAB1<------NtERF2---------->DOF2 --------->WOX13(1)  ----------->GT1   --------->ICU4      --
 
atcaatggatagccagcaaaatgttcaaaaagcttcgcttgaccaatcattaaagaattgaaactgtcaaaacagtgagcaattatctcagcgtttgaag  12923000
        --------->ARR11(3)                                                                        --
        <---------ARR11(3)                                                                        --
        <---------GLK1(2)                                                   ---------->DOF2      <--
 <---------RVE1(1)                                                   <---------HSFB2a(2)       -----
<---------ARR11(3)                                                   --------->HSFB2a(2)      <-----
--------->ARR11(3)                                                 <---------LBD16            ------
<---------GLK1(2)                                               <<<<<<<<<MYB2                 ======
--------->ARR10                 ----------->GT1   --------->AHL20(2)<---------LBD16         --------
 
gaagatttttagatttttgtttctgttttagaatttagttacaaaaatccaaaaaaaatagtttttggttttcgggagagaaagaatgaaatctatacta  12923100
   <------ZmHOX2a(1)          --------->ANAC58    <---------------AGL15
------>HAHB4                  --------->ANAC58    <----------DOF2
------->YAB1                  --------->ANAC46    <---------DAG2       --------->YAB1
-------YAB1              <-----------ARR10---------->DOF2         <---------ANAC58
---->YAB1          ------>MYB83        --------->TOE1(3)          <---------ANAC46
----------AGL15    ------>MYB46(1)     --------->TOE2(3)          <---------ANAC58
--------->AGL15  --------->TOE2(2)   --------->ARR11(3)       <------ZmHOX2a(1)----------->GT1
==================================================================MADS_MADS--------->MYB52(1)
->YAB1           --------->TOE1(2)   <---------ARR11(3)<-----------TBP<---------YAB1           -----
 
ataataggagtagtttgagacctacgagagtctacgcatagaccttaaaactccttttttttgtaggatgcttataattaaggggaaacttaacaaacta  12923200
         <---------YAB1      <---------TOE1(2)                          <----------DOF2
      =============================HOX2a_HOX2a         <---------AHL20(1)
      ------>ZmHOX2a(2)      <---------TOE2(2)         --------->AHL20(2)
------>GT1--------->YAB1    ------>ZmHOX2a(1)          --------->AHL20(1)                      <----
 
gttatatgatccatgatagtaaacaattctcctatgtttctctatttcaattgaagaatataatccatggcctctctttataagaaaaaatggcatccgt  12923300
                                                                              --------->ALFIN1
                             --------->YAB1                            --------->ANAC58
              --------->AHL20(2)                           <-------GAMYB     <-------MYC3
            <---------AHL20(2)                 <---------ARR11(3)      --------->ANAC58
            --------->AHL20(2)  <---------AHL20(2)        --------->MYB52(2) ------->MYC3
      --------->YAB1    <---------ANAC46       --------->ARR11(3)      --------->ANAC46
     <<<<<<<<<ARR2<---------AHL20(2)          --------->CCA1(1)     ----------->HVH21  --------->ARR11(3)
     <<<<<<<<<ARR1--------->AHL20(2)          --------->RVE1(1) <---------ZAT18   <---------YAB1
-----MYB52(1) <---------AHL20(2)--------->AHL20(2)        <---------MYB46(3)<---------ANAC46
 
tgtttacaatcgtatatatatataattctgtataataaaacttcttcaaatatctaatagtttgttgtcccctcacacaacgtggatgattatctagttc  12923400
<- Previous    Next ->

AGI:  At2g30290.1   
Description:  vacuolar sorting receptor, putative. Identical to Vacuolar-sorting receptor 2 precursor (VSR2) [Arabidopsis Thaliana] (GB:O22925;GB:Q1PEY7); similar to vacuolar sorting receptor, putative [Arabidopsis thaliana] (TAIR:AT2G14740.2); similar to vacuolar sorting receptor, putative [Arabidopsis thaliana] (TAIR:AT2G14740.1); similar to ATELP/ATELP1/BP-80/BP80/BP80B/VSR-1/VSR1 (ARABIDOPSIS THALIANA EPIDERMAL GROWTH FACTOR RECEPTOR-LIKE PROTEIN), amino-terminal vacuolar sorting propeptide binding [Arabidopsis thaliana] (TAIR:AT3G52850.1); similar to vacuolar sorting receptor protein PV72-like protein [Solanum tuberosum] (GB:ABC01915.1); similar to u
Range:  from: 12919967    to: 12922858    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

    printer-friendly version