Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                --------->LBD16                                            <---------LBD16         <---------TGA1a                ------>NtERF2         --------->TGA1a              <---------ANAC58         =================bZIP_DOF    <---------ANAC58      --------->TOE2(2)               ---------->ARF1      --------->DEAR3(1)          ------>ZmHOX2a(2)     --------->MYB46(3)         --------->ARR11(3)--------->ANAC58     --------->DEAR3(2)         <---------ARR11(3)--------->ANAC58    <-----------GT1            ----   --------->MYB52(1)       --------->YAB1<---------LBD16      --------->AtLEC2       ---------->DOF2 ------->TGA1  ---------->DOF2<---------YAB1--------->LBD16 <-------TEIL          ------>ZmHOX2a(1)   tgacgaaaccgacgtttgaaagcgtttgtattatgatcttgcctcccgcgggaagaaacatgttcatgtaaatcacattatgtcctaagaaagacggtcc  12909500                             --------->ANAC58                    <-------TEIL            --------->ZAT14  --------->ANAC58   ------->TEIL -->ZmHOX2a(1)<---------REM1(2)              ----------->GT1                         ---------->DOF2   taaaacaacaccagtctacacatacacaaacaagaaaatgttttaaaacgtatattttcgcaataagagatagtgaatgcggtatttgaaagttatacca  12909600                       <----------DOF2                      <---------ANAC58                      <---------ANAC58                  <---------ANAC58                  <---------ANAC58              --------->KAN4(2)             --------->KAN4(1)             <---------KAN4(1)            --------->LBD16                ----------->HVH21            <------ZmHOX2a(2)            --------->ANAC58               <---------WOX13(1)            ================================HOX2a_HOX2a              <---------YAB1           --------->ARR11(3)           <---------LBD16            --------->YAB1           <---------ARR11(3)        <------ZmHOX2a(1)             <---------ICU4          --------->GLK1(1) <---------TOE1(3)               ----------->TGA1     <---------At4g35610    <---------TOE2(3)   --------->CCA1(2) --------->ICU4     --------->At4g35610  ---------->DOF2--------->ANAC58   ----------->HVH21   agacttgagcagagatcattccttgctttaaaggttgaaggacgcggaagataagcctagaggtgacgatgatgactgacatttgtagcaatagaagagg  12909700                                                                                               <-----               <-------GAMYB                                      --------->ANAC58             ------              ----------->GT1                                     --------->ANAC58             <-----     --------->ARR14(2)                                     <---------ANAC46                   ------     <---------ARR14(2)                                    <---------AtLEC2                 <--------  <---------ANAC46                                         ----------->RAV1(2)              <--------  <---------ANAC58  <---------DAG2----------------->AGL1   <---------ANAC58               ------->TEIL  --------->ANAC55(2)     --------->AtLEC2                 <---------ANAC58         --------->ATHB12  <---------ANAC55(2)   <---------AtLEC2               <---------ANAC58            <---------YAB1  <---------ANAC58  <----------DOF2                    <---------ANAC58       --------->HSFB2a(2)   caatgcgtatttgagagggttacttttcatgaaaatgcctcttgaggtcagcatgttttgtgcctggcacacaatctcttccagcatgaatggaccgtgc  12909800      <---------ALFIN1 <---------ARR14(2)                              ---------->DOF2   --------->PCF2      <---------ARR11(3)                      ------>ZmHOX2a(1)   --------->ANAC46    --------->ARR14(2)                     --------->TOE2(3) ----ZAT14             --------->ARR11(3)                    ----------------->AGL1 --->ZAT18            <---------CCA1(2)                      ----------------->AG ----ZAT18          <------MYB83              --------->At4g35610  --------->ZAT6 --->ZAT14          <------MYB46(1)        ---------->DOF2  ---------->ID1 -ANAC58          <--------P         <---------ATHB12    <----------DOF2   <----------ID1  ---------- -ANAC58   ----------->HVH21    ------>NtERF2--------->HSFB2a(1)  <---------YAB1---------->DOF2   acttcgccccactgcgacgagttggtatcttctctgccaaacatcgaaagctccatagtcttttccttatcagtaaaacgaagaaagcgagtagaaagag  12909900                                                                                                  <--                                                                                                  <--                                <---------YAB1                                                  <----                       <---------YAB1                                                <------ZmHOX2a(1)                       ------------>CBF                                             <---------ZAT18 >DOF2        <---------------------WRI1                                            --------->ZAT14   ggagagagactaggtttgggaaactatcaatgttatgttttcatttttgatgagaaaatgtaagggagaatgagagaagaaaacagaggactctgttttt  12910000                                                     <---------MYB46(3)                                                     <------MYB46(1)                                                     <------MYB83                                                   <---------WOX13(1)       ---------->DOF2                                        --------->ANAC46                  <------ZmHOX2a(2) -------ANAC58                ----------->GT1     <------------CBF      --------->At4g35610 -------ANAC58               --------->ZAT6      --------->ATHB12<---------------------WRI1 <-------- -------GT1                 <---------YAB1---------->DOF2       <----------DOF2          --------->CCA1(2)   acttgtggctatgaaggctaacttcttcttatcagtaaatacacaaaagatagattggttcttcgactttggtgagatcaaagagagagagatagaggta  12910100                                                                         <--------P                                                                         <---------WOX13(1)                                                                        <-------GAMYB                                              <------------CBF         <------MYB83                                             <---------AHL20(2)        <------MYB46(1)                                            --------->AHL20(2)         <---------MYB46(3)                                           <-----------TBP   --------->YAB1                   -------                                         --------------->AGL15        <---------AtMYB61    <---------GLK1(2)                                         <---------------AGL15    <---------YAB1           <---------ICU4                                        ----------------->AGL3 <---------YAB1           --------->YAB1                                  ---------->ID1             <--------HAHB4       <----------DOF2  <-                       ------->TEIL   <-----------GT1       <---------YAB1       <---------ICU4    -- -TOE2(3)      ---------->DOF2  <-----------RAV1(1)   <----------DOF2 --------->MYB59  ------>ZmHOX2a(1)   tgtgagagaaggtagaagaaagatgagcctatatttgttgtttctatttattgtttctttctattattatgtttggttgatcatctttcctcataatctc  12910200                                                             --------->ANAC46                                                 --------->AHL20(2)                                                 --------->AHL20(1)                                 -                                                 <---------AHL20(2)                                <-                                             <---------AHL20(2)                                   ---                                             --------->AHL20(2)                                   ---             <---------TOE2(3)              --------->AHL20(2)                                   ---- -->TOE2(3)  ---------->ID1               --------->YAB1     --------->ANAC58                   ----- --------ATHB12                        --------->YAB1        --------->ANAC58           <-----------RAV1(1) ------->MYB46(3)  <---------AtMYB61  <---------YAB1    ------->TEIL--------->ALFIN1    --------->ALFIN1   aaccattctaaatttgtggttttggtttcacttctaagttctaataataaataaaatgaactcacacaatgtggagatagaatgctagatgtgttgcacc  12910300            <-------GAMYB        <---------DAG2           <------MYB46(1)       <----------DOF2           <------MYB83         <---------ANAC58         --------->ALFIN1       <---------ANAC58     ---------->DOF2       --------->ATHB12  --------->AtLEC2         --------->ATHB51  --------->ANAC58         <---------ICU4  --------->ANAC58      <---------ICU4 --------->WOX13(1)     --------->ATHB51                    ------->TEIL --------->DOF2         <--------HAHB4                      <-------TEIL                          <-- --------ATHB12         --------->YAB1                  <---------------AtSPL8             <---------ARR11(3) --->MYB83 ----------->GT1<---------YAB1                <---------------AtSPL3           --------->ANAC58 --->MYB46(1)          --------->ICU4                   --------------->AtSPL8  --------->AtMYB61---- ----->WOX13(1)        <---------YAB1               <---------AHL20(2)    ---------->DOF2--------->ANAC58 ---->MYB46(3)    --------->ANAC46               ----------->GT1 --------->WOX13(1)  --------->ANAC46   aatcaagcaaagtgggttacaaaccattattattgctttatcaaatttgaatattaaaaatgtacataaatcaaacaaaagaccaatacacaagaactat  12910400  Previous    Next  AGI:  At2g30240.1    Description:  ATCHX13 (cation/H+ exchanger 13); monovalent cation:proton antiporter. similar to ATCHX14/CHX14 (CATION/HYDROGEN EXCHANGER 14), monovalent cation:proton antiporter/ sodium:hydrogen antiporter [Arabidopsis thaliana] (TAIR:AT1G06970.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21363.1); contains InterPro domain Sodium/hydrogen exchanger; (InterPro:IPR006153) Range:  from: 12906984    to: 12909856    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g30250.1    Description:  WRKY25 (WRKY DNA-binding protein 25); transcription factor. Identical to Probable WRKY transcription factor 25 (WRKY25) [Arabidopsis Thaliana] (GB:O22921;GB:Q94AT4); similar to WRKY33 (WRKY DNA-binding protein 33), transcription factor [Arabidopsis thaliana] (TAIR:AT2G38470.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21360.1); contains InterPro domain DNA-binding WRKY; (InterPro:IPR003657) Range:  from: 12910313    to: 12912275    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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