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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                ------>ZmHOX2a(2)
                =====================HOX2a_HOX2a
               <------ZmHOX2a(2)
              --------->ARR11(3)
              <---------ARR14(3)
              <---------ARR11(3)
              <-----------ARR10
              --------->ARR14(3)
              <---------ARR14(2)
              --------->ARR14(2)
              <---------AGP1
              --------->AGP1
          <---------ZAT14
          --------->ZAT14
    ------>NtERF2
   <---------ETT(2)               <---------DEAR3(2)
   --------->ETT(2)               <---------MYB46(3)
  <------NtERF2======================HOX2a_HOX2a
 <---------ATERF1(1)           --------->MYB52(1)
--------ZAT2 <---------CCA1(2)----------->TGA1                                       --------->REM1(2)
------->ZAT2----------->ARR10 ----------->HVH21             <---------ARR14(2)     --------->LBD16
--------At4g35610             ------>ZmHOX2a(1)             --------->ARR14(2)    <---------ANAC46
------->At4g35610           --------->At4g35610   --------->ANAC58       --------->ANAC58
-NtERF2 <---------ZAT14--------->WOX13(1)         --------->ANAC58       --------->ANAC58   --------
--DEAR3(1)<---------ZAT18   ----------->RAV1(2) ---------->DOF2 --------->At4g35610--------->At5g28300
 
gagctggcgactgtgcagatcttcatcaatctcctgacggttcgaattaccaaaagccatgtcgatttgctgaacgacgctatcgccgtgaaaacccctg  12864300
                                                       --------->SPL7                             <-
        ----------->GT1                              --------->ARR11(1)                    ---------
        --------->At4g35610                ----------->GT1                            --------->MYB46(3)
   --------->HSFB2a(2)                   <-------TEIL<---------ARR14(2)  <---------YAB1   <---------ATHB12
   <---------HSFB2a(2)                  --------->GLK1(2)       <---------ANAC46      --------->DEAR3(2)
 --------->MYB52(1)                    <---------ARR14(2)  <---------ANAC58         <---------ARR14(2)
--->RAV1(2)                            --------->ARR14(2)  <---------ANAC58         --------->ARR14(2)
 
ctactaccagaagctaaaatcgaagaagacttatcagacgaagattcagtgaaatcgatacggcgtttcttagatgatgctaaatcggaaccgatgatgg  12864400
                              <---------ANAC58
                           <---------ZAT18
                         --------->STY1(2)
                         --------->ZAT2
                --------->At4g35610
             <---------MYB52(1)
             --------->DOF5.7(2)
            --------->TOE1(3) <---------ANAC46   ----------->GT1
 <---------YAB1 <---------At4g35610        --------->DAG2
<-----------GT1--------->MYB52(2)      --------->YAB1     <---------LBD16                      -----
--------YAB1--------->TOE2(3) <---------ANAC58   <---------YAB1       ----------->GT1          -----
>YAB1  <---------YAB1    <---------STY1(2)---------->DOF2----------->RAV1(2)                   <----
 
tattatcgttcttatcgttagcttcactagctcgcttgtgaagcataaagtgatgaaaaaacctggagaaaacatgtgaaattcccattagattagagaa  12864500
                                           <---------WOX13(1)
                                     --------->TOE1(3)                                             =
                                    --------->ZAT6                                                 <
                                  ------>MYB83<---------GLK1(2)                               ------
           <---------ARR14(2)    --------->MYB55(1)                                        =========
      ----------->GT1           <---------MYB59                                            ---------
    ----------->GT1             <---------MYB111(1)                    ----------->GT1    <------ZmHOX2a(1)
--------->ZAT14   --------->YAB1<---------MYB52(2)            --------->YAB1        ================
<---------ZAT14  <------ZmHOX2a(2)------>MYB46(1)          --------->CCA1(2)        <----------DOF2=
---->ZAT18 --------->ARR14(2)   <---------MYB46(2)      --------->ANAC58         ------->TEIL <-----
---->ZAT14 --------->GLK1(2)   --------->ANAC55(2)      --------->ANAC58     --------------->AtSPL8-
-----ZAT14<---------GLK1(1)    <---------ANAC55(2) <---------LBD16    ----------->GT1   <---------TOE2(3)
 
cactgaagagagaaaatccgatcagaattgaaatacctaaccctagattgattcttcggaagctatgagaaggaagataaaacgtacctttgaggaaagc  12864600
                                          ------>ZmHOX2a(2)
                                         <------ZmHOX2a(2)
                                         --------->CCA1(2)
                                         --------->At4g35610
===============================bZIP_DOF --------->ARR14(2)                                   *TSS
---------TGA1a                          <---------ARR14(2)                                --------->AHL20(2)
--->At4g35610                           <---------AGP1                                    <---------AHL20(2)
=========bZIP_DOF            --------->DAG2                                              --------->AHL20(2)
->DOF2 --------->ATHB12     ---------->DOF2                                            --------->ARR11(3)
=========bZIP_DOF       <----------ID1  <---------ARR11(3)                   <---------GLK1(1)
===============================bZIP_DOF --------->AGP1             ------->TEIL        <---------ARR11(3)
----At4g35610         ----------->GT1   --------->ARR11(3)   ----------->HVH21       <---------TOE2(3)
-------->TGA1a      ---------->DOF2    <---------GLK1(1)     ----------->TGA1--------->GLK1(1)
 
agacgagagaagattggaatcggaaaagagaaaaagtttttgagatctgaaaattgaaattgaagtgacgaattttgcagaaatctctaagatttattta  12864700
                          --------->MYB55(2)
                          <---------MYB46(3)
                          --------->ALFIN1
                        <-------GAMYB
                       <------MYB83              <---------ANAC58
                       <------MYB46(1)           <---------ANAC46                                  -
               --------->DAG2       --------->CCA1(2)          <---------TOE2(3)                 ---
             ---------->DOF2       --------->ARR14(2)  <-----------GT1                  --------->LBD16
           --------->ANAC58    <---------ANAC46  <---------ANAC58                       ------>NtERF2
           --------->ANAC58 --------->ALFIN1    ----------->STF1           ---------->ID1    <------
         --------->MYB52(1) <---------ANAC46   <---------TGA2(2)     --------->ATHB12 <---------LBD16
        <---------SPL7--------->MYB59         ----------->TGA1 <---------TOE1(3) <----------DOF2 ---
 --------->CCA1(2)   <-------TEIL  <---------ARR14(2)  --------->MYB52(1)<-----------RAV1(1)--------
 
agagagacgggcgaacgaaaggggttcggttgtggggggatatgaaacgatgacgttttaacggttaaggtttgatttgtcgctctttctccgcgtgatt  12864800
                        --------->ANAC58
                        <---------TGA1a                       <---------AHL20(2)
                        <---------ANAC55(2)                ----------->GT1
                        --------->ANAC46              --------->LBD16
                        --------->ANAC55(2)         ------>ZmHOX2a(2)                   --------->GLK1(2)
                        --------->ANAC58            ==================================HOX2a_HOX2a
  <------NtERF2         --------->TGA1a             <---------LBD16                  <---------YAB1
 ------>NtERF2   --------->LBD16                   --------->CCA1(2)           ------>ZmHOX2a(1)
<---------bZIP60(1)     --------->O2               <------ZmHOX2a(2)         --------->HSFB2a(1)
--------->bZIP60(1)     <---------O2               --------->ARR14(1)        ------>ZmHOX2a(2)
<---------ANAC46--------->LBD16                    ===================================HOX2a_HOX2a
<---------ATERF1(2)  <---------ARR14(2)           --------->AGP1             --------->HSFC1(2)
--------->ATERF1(2)  --------->ARR14(2)           --------->ARR14(2)         <---------HSFC1(2)
-------->RAP2.6(3) ----------->HVH21              <---------ARR14(2)         <---------HSFB2a(1)
-------->TGA1   <---------LBD16 <---------MYB52(1)<---------ARR11(3)        <------ZmHOX2a(2)
------CBF  ----------->HVH21 --------->SPL7       <---------GLK1(2)        ------->TEIL ------->TEIL
-------->HVH21 <---------LBD16--------->ANAC46    --------->ARR11(3)       --------->ARR14(2)    <--
->ATHB12   --------->WRKY12<-----------HVH21    ----------->ARR10          <---------ARR14(2)   ----
 
gtgacggcaactctctgaccgggggacacgcgtccgtcactatttcaagaccagatccggtttagttaatttcttatggatccttcttatgaatctgtat  12864900
                                                                                       --------->AHL20(2)
                                                                                       <---------AHL20(2)
                                                                                    --------->YAB1
                                                                                   <---------YAB1
                                                                                   --------->ICU4
                                                                                  <---------AHL20(1)
                                                                                  <---------AHL20(2)
                           <-----------GT1                                        --------->AHL20(2)
                       <---------AHL20(2)                                        --------->YAB1
             <----------DOF2                                                    <---------YAB1
            <---------ANAC58                                                   --------->AHL20(2)
            <---------ANAC58                                                --------->YAB1
-------AHL20(2)        --------->AHL20(2)              <----------DOF2   --------->TOE2(3)        <-
----->AHL20(2)   <----------DOF2                <---------CCA1(2)        <----------DOF2<---------AHL20(2)
 
taaatctgaaatattgctttctttttttaattaccaagttcaaaaaaactcacatcttcttttggataactggaaactttaatattataattaaatatta  12865000
                         <---------AHL20(2)
                     <---------YAB1
                     --------->ICU4
                    <---------AHL20(1)
                    --------->AHL20(2)
                    <---------AHL20(2)
                   --------->YAB1
                  <---------YAB1
                 --------->AHL20(2)
            <---------YAB1
        --------->ZAT2   --------->AHL20(2)                                       <----------DOF2
        <---------ZAT2--------->YAB1                                        --------->YAB1
        <---------At4g35610                                           --------->AHL20(2)    <-------
-----ZmHOX2a(2)------->TEIL   <-------TEIL                --------->GLK1(2)<-------TEIL     <-------
 
gatcaatttccagctatgaatattataattaaatacattttcttctaaagtttctcaaaacaatcttttgaaaaaaaattcatgactttctatgacttta  12865100
                                            --------->AHL20(2)
                                            <---------AHL20(2)
                                        --------->ATHB51
                                        <--------ATHB1
                                        --------->AHL20(2)
                                        <---------AHL20(2)
                                        <---------ICU4
                                       --------->ICU4
                                     --------->YAB1
                                  --------->YAB1
                            <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)
                            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
                            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)            <---------YAB1
                            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)  <---------AHL20(2)
                           --------->MYB46(3)                    <---------CCA1(1)
                          ------->TEIL <---------YAB1            <---------RVE1(1)
                 xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)           <---------GLK1(2)
                ---------->DOF2 --------->AHL20(2)              <---------ARR11(3)                <-
               xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)       --------->YAB1  <---------AHL20(2)<------
   ---------->DOF2xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) --------->WOX13(1) --------->AHL20(2)-------
--DAG2         <xxxxxxxxxxxxxxxxxxxsmallRNA(i2)  --------->YAB1<---------RVE1(1)             <------
---DOF2     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)<---------ATHB12--------->ARR11(3)     --------->ZAT6
 
ttttgtgaaagaaaatgtagaaagtcatgaaccaataacataataatttaaatcataaacaatcagagatttttttgttttaatagaataacacaaaaaa  12865200
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AGI:  At2g30110.1   
Description:  ATUBA1 (ARABIDOPSIS THALIANA UBIQUITIN-ACTIVATING ENZYME 1); ubiquitin activating enzyme. similar to ATUBA2 (Arabidopsis thaliana ubiquitin activating enzyme 2), ubiquitin activating enzyme [Arabidopsis thaliana] (TAIR:AT5G06460.1); similar to ubiquitin activating enzyme 2 [Nicotiana tabacum] (GB:BAD00984.1); similar to ubiquitin activating enzyme 1 [Nicotiana tabacum] (GB:BAD00983.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21409.1); contains InterPro domain Ubiquitin-activating enzyme, E1; (InterPro:IPR000011); contains InterPro domain UBA/THIF-type NAD/FAD binding fold; (InterPro:IPR000594); contains InterPro domain NAD(
Range:  from: 12859449    to: 12864694    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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