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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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    --------->AHL20(2)                                                            --------->ZAT6
    <---------AHL20(2)                                  ----------->GT1      <---------ANAC58
--------->AHL20(2)                                ---------->DOF2            <---------ANAC58
<---------AHL20(2)                          --------->GLK1(2)               --------->HSFC1(2)
-------->ICU4                   ------------>AtMYB77  ---------->DOF2       <---------HSFC1(2)    --
---ZmHOX2a(1)                 <---------ATHB12--------->YAB1          ---------->DOF2 --------->YAB1
 
gaattaataaaactactgaaaaactaaactctaatcaacagttagagaatcagaaaagaaagtaaaacttcaaaaaagaagcttgtcactaatagtttct  12811700
                                                              --------->LBD16
                                                             <---------HSFB2a(2)   ----------->RAV1(1)
              <---------ALFIN1                               --------->HSFB2a(2)   ------>MYB46(1)
       <---------ANAC46            --------->ANAC46       <---------ARR14(2)       ------>MYB83
 <------ZmHOX2a(1)      <-------TEIL                      --------->ARR14(2)   -------->P   <-------
------->At4g35610      --------->AtLEC2             <-----------GT1         <---------MYB52(2)
 
cagaggaatttcgtcgaacaccttacatgcatcagttccagccaaaattttctaatttccagttccagaggcctactctactaacccaacaaaatcgtgg  12811800
                                            --------->At4g35610                                    -
                                           --------->HSFB2a(1)                                     -
                                         ---------->DOF2                                         ---
             --------->ANAC58        --------->MYB52(1)                                 <---------GLK1(1)
    <---------MYB52(2)             --------->MYB46(3)                                  --------->ARR11(3)
--LBD16      --------->ANAC58      <---------MYB52(2)  --------->YAB1                  <---------ARR11(3)
 
aagagaaactatcgataagaaatttgaaatttgatcaaactaccgaaagctccatcaataagcatagacattacaaaatacaaaccctaagatttcagag  12811900
                                                                     ------>ZmHOX2a(2)
                                                                   --------->ARR14(2)
                                                                   <---------ARR11(3)
                                                                   --------->ARR11(3)
            --------->ANAC46                                       <---------ARR14(2)
         --------->ZAT14                                           --------->AGP1
         <---------ZAT18                                          --------->GLK1(1)
         <---------ZAT14                                          <---------GLK1(1)
     <---------ICU4                 ----------->GT1        ---------->DOF2
     --------------->AtSPL8       --------->DAG2        --------->ANAC58
------->GAMYB                    ---------->DOF2        --------->ANAC58
-------->ANAC58              --------->LBD16        --------->ANAC46 <---------MYB59              <-
-------->ANAC58            <---------LBD16          --------->ANAC58--------->CCA1(2)        <------
------>MYB52(1)  --------->AHL20(2)--------->DAG2   --------->ANAC58<------ZmHOX2a(2)        -------
 
caacgaaatcagtacacaaaataaacaaaccccagaaaaaggtgaaataaaactcacacaagtaaagggagatctaacttgagccaatagagaagaacgt  12812000
                        <---------ARR11(3)
                        --------->ARR14(2)
                        --------->ARR11(3)                                                     -----
                        <---------ARR14(2)                         <---------ARR14(2)         <-----
                 <----------ID1                                    --------->ARR14(2)         <-----
       <---------HSFC1(2)               ---------->DOF2         --------->ETT(1)      --------->HSFC1(2)
       <---------HSFB2a(1)    ------>NtERF2              --------->ARR14(2)           <---------HSFB2a(1)
       --------->HSFC1(2)<------ZmHOX2a(2)        --------->AHL20(2)                  <---------HSFC1(2)
       --------->HSFB2a(1)   --------->DEAR3(1)   ---------->DOF2  <---------GLK1(2)  --------->HSFB2a(1)
--------ANAC46  <---------ZAT18    --------->ANAC58      --------->GLK1(2)      --------->MYB52(1)
---HSFB2a(1)<---------HSFB2a(2)    --------->ANAC58  *TSS------->TEIL    --------->ANAC46     ------
-->HSFB2a(1)--------->HSFB2a(2)<---------------------WRI1<---------ARR14(2)   <---------MYB52(2) ---
 
tgcgacgagaaatttccagagcgccaagatcgacgacgaagcaaaaagagcaataaaacgaatcgggtcggattctacacaaataacgaagcatccagat  12812100
                ------------>CBF
              <---------PCF2
              --------->TCP20
              --------->TCP15(1)
        --------->DAG2
       --------->ZAT14                                  --------->ATHB12
       <---------ZAT14   <---------ARR11(3)             --------->ATHB51
       ---------->DOF2  <---------GLK1(2)              <---------YAB1                           <---
  --------->ZAT14    --------->YAB1                  --------->ATHB51                        -------
  <---------ZAT14 --------->WOX13(1)                 <---------ICU4                          -------
---->GLK1(2) <------MYB46(1)                         <--------HAHB4                        ---------
----ARR14(2) <------MYB83--------->GLK1(2)          <---------YAB1                         ------>MYB83
----GLK1(2)--------->ALFIN1 <----------DOF2 ---------->DOF2                                ------>MYB46(1)
--->ARR14(2)<---------MYB46(3) ---------->DOF2      --------->ICU4                       --------->AtMYB61
-------------->AGL1 <---------ATHB12  ---------->DOF2--------->YAB1<---------GLK1(2)     <---------MYB59
 
tccagtttagtaaagtgggtccaatcagaatctttaaagcccaaagtaaaagcccattattattggaccagattagtttaagttgctccaaaccaaaccg  12812200
                                                                                       --------->At4g35610
                                                                            --------->ANAC46
                                                                            --------->ANAC58
                                                                            --------->ANAC58
                                   --------------->AGL15                   <---------ZAT18      <---
                                   <---------MYB59                         --------->ZAT18------>NtERF2
                                   =================================================================
       --------->WOX13(1)         ----------------->AGL2                --------->ALFIN1 --------->RAP2.6(2)
     <---------ATHB12             --------->ANAC58                  <---------YAB1     ----------->RAV1(2)
------MYB52(1)           <---------ATHB12                   <---------DOF5.7(2)        <---------At4g35610
-->DEAR3(2)           ------>ZmHOX2a(1)                     <---------At5g28300        <---------ZAT2
-->RAP2.6(3)<-----------GT1       --------->ANAC58        --------->DOF5.7(2)    <---------MYB52(2)
>MYB52(1) --------->AHL20(2)  --------->YAB1  <---------LBD16   <---------MYB52(1)     --------->ZAT2
 
gcagtcaaatcaattaaaccatgtcctaatcaatagtacccaatttagacccggtccaaacgttaccgtttatgagtgtgcgcaactagcagctgccact  12812300
                                                            <---------DAG2
                                                            <----------DOF2
                                                           <---------ANAC58
                                                           <---------ANAC46
                                                           <---------ANAC58
                                                      --------->O2
                                                      <---------bZIP60(1)
                                                      <---------ANAC46
                                                      =================bZIP_DOF
                                                      <---------TGA1a
                                --------->WRKY45      <---------ANAC58
                                ----------->HVH21     --------->bZIP60(1)
                                --------->WRKY12      <---------ANAC55(2)
                              <----------DOF2         --------->ANAC55(2)
                           ------>MYB83               >>>>>>>>>>HY5
                      <---------WRKY18(1)             <---------O2
                     --------->WRKY38(1)              <---------ANAC55(1)
                     --------->WRKY12                 <---------ANAC58
                    <---------WOX13(1)                --------->TGA1a                 --------->YAB1
                  --------->ATHB12                    <---------bZIP60(2)           <---------ARR11(3)
                 <---------AHL20(2)                  ----------->STF1               --------->ARR11(3)
          ----------->GT1  ------>MYB46(1)         ----------->HVH21               --------->YAB1
         XXXXXXXXXXXXXXXXXXXX>MIR779.2         --------->ZAT14                --------->AHL20(2)
   ----------------->AG -------->ZAP1          <---------ZAT14         --------->AHL20(2)    -------
   ----------------->AGL1<---------MYB59      <---------ALFIN1   <-----------GT1  --------->ICU4
--------HVH21    <---------YAB1 --------->WRKY38(1)----------->TGA1    --------->YAB1<---------YAB1-
=====================MADS_MADS==================================bZIP_DOF <---------YAB1      <------
 
gtcagtgccaaattggtaatttcattgacctagctttgactgagtatcaccacagtgacgtggctttttcacaattataaaaaaaatgatcatattctag  12812400
                     --------->ARR14(2)                     --------->GLK1(2)
                    <---------GLK1(2)                       --------->ARR14(3)     ---------->DOF2
                ---------->DOF2                             <---------ARR11(3)  --------->YAB1<-----
           ---------->DOF2 <----------DOF2                  --------->ARR11(3) <------ZmHOX2a(2)
       --------->DAG2--------->GLK1(2)                      <---------ARR14(3)<---------ARR11(3)
      ---------->DOF2<---------ARR14(2)               --------->YAB1          --------->ARR11(3)
-->HSFB2a(2) --------->ANAC58                  <------ZmHOX2a(1)         <-----------HVH21    ------
----------------------->ANAC81               --------->ANAC46         <---------ANAC58       <------
---HSFB2a(2) --------->ANAC58                <---------TOE2(3)        <---------ANAC58      <-------
 
acatggaggtaaagtaaagcaaagaatctgcatttttgtattttctctaaggaacaattacaaaatcttgataccttgtgagatcataaagaaggtcgtt  12812500
                --------->AHL20(2)
           <---------AHL20(1)
           --------->AHL20(1)
           <---------AHL20(2)                           <-----------GT1
  <---------MYB52(1)   --------->TOE2(3)           <----------DOF2
----MYB52(1)<---------YAB1                     <-----------GT1
--->DOF5.7(2)   <---------AHL20(2)        --------->MYB52(2)                             <---------ZAT6
-GAMYB    --------->AHL20(2)            <---------MYB52(1)     --------->YAB1          <---------At5g28300
--MYB46(3)--------->YAB1             <-------TEIL <---------DAG2                      <-----------GT1
 
aactcgttatctattatatttatataccttgaattcttgatacgtttgttttacctttttttctattgataatacgtttgaagtttgttttactgttaca  12812600
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AGI:  At2g30000.1   
Description:  Identical to Uncharacterized protein At1g07170/At2g30000 [Arabidopsis Thaliana] (GB:O80873); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G07170.2); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G07170.1); similar to Os04g0663300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054163.1); similar to unknown [Picea sitchensis] (GB:ABK20981.1); contains InterPro domain PHF5-like (InterPro:IPR005345)
Range:  from: 12810930    to: 12812054    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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