AthaMap TU-Logo
Search
 
   Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
Go to graphical and table display 

1        10        20        30        40        50        60        70        80        90        100 
    --------->ANAC58                                                                          <-----
    --------->ANAC58                                                                <---------TOE1(2)
--------->ANAC58                                                                    <---------TOE2(2)
--------->ANAC58                                                                   <-----------RAV1(2)
------->MYB52(1)                                                              <---------GLK1(1)-----
--->HSFC1(1)                                              ---------->DOF2 --------->HSFB2a(2) <-----
----HSFB2a(2)                                        ----------->GT1      --------->HSFC1(1)  ------
--->HSFB2a(2)            --------->At4g35610       <------ZmHOX2a(1)      <---------HSFC1(1)  <-----
>ARR11(3)             --------->At4g35610--------->WOX13(1)               <---------HSFB2a(2) <-----
 
gaaacggaagcaatacctcatgagcatcagcatcaagacgagagcaattagcgaggaagaaaaaagaaccaggctctctagaaatcgcaggttgaatacg  12802600
         <---------At4g35610
         --------->At4g35610
      <-------TEIL
   <------MYB46(1)
   <------MYB83
  --------->MYB59 <---------MYB59              --------->ANAC58                                  <--
----ANAC58    ------->GAMYB                    --------->ANAC46                                  ---
---->TOE1(2)--------->At4g35610                --------->ANAC58                                  ---
----ANAC55(2)--------->MYB46(3)     ------>MYB83                                            --------
--->ANAC55(2)--------->DEAR3(2)     ------>MYB46(1)        ----------->GT1     <---------HSFB2a(2)
----ANAC58 ----------->RAV1(1)     ----------->RAV1(1)     <---------ANAC46    --------->HSFB2a(2)
----ANAC55(1)<---------MYB52(2)   --------->AtMYB61       <------ZmHOX2a(1)    <---------LBD16   <--
 
tgagataggttcagcaacagacctaaattcgagagtaccaacacaagtagaagcaagaagaggagtgaaaaccatatggtttctcggagaaacacaaacg  12802700
                                              ------>MYB46(1)
                                              -------->P
                                              ------>MYB83
                                             <---------ALFIN1                                   <---
                                            --------->AtMYB61                                  -----
                                            <---------ALFIN1                                 <------
                                           --------->MYB46(3)                               <-------
                                          --------->ANAC46                                  <-------
          <---------ANAC58               --------->LBD16                                   <--------
          <---------ANAC58               ------>NtERF2                                     <--------
        --------->GLK1(2)               --------->ANAC58                                 <----------
       <---------GLK1(2)                --------->ANAC46                                --------->O2
<---------ANAC46                        --------->ANAC58                                <---------TGA1a
-------bZIP60(1)         --------->YAB1--------->MYB46(3)        --------->ZAT14        ============
------>bZIP60(1)  <------ZmHOX2a(2)    ------->GAMYB        --------->MYB46(3)          --------->TGA1a
------>O2 <---------ANAC55(2)      --------->MYB46(3)  --------->LBD16                  <---------O2
->MYB52(1)--------->ANAC55(2)--------->WOX13(1)  ----------->HVH21       <---------GLK1(2) <--------
-------O2<-------TEIL <----------DOF2-------->P  --------->ANAC46<---------ZAT14  ------>ZmHOX2a(1)
 
acgtcgtagagattcgtatcgatccctttcatcaatcgacaacccgcccaacccgacccgagaaccactactctcggcttctctccttctctcgtcggtg  12802800
  --------->TOE1(3)
  --------->TOE2(3)
---NtERF2
->NtERF2                                                                    --------->ARR14(2)
-GAMYB                                                                      <---------ARR14(2)
--MYB46(3)                --------->ATHB12                              <---------ZAT18
--DEAR3(2)             --------->ANAC46                                 --------->ZAT14
-DREB2C(2)             --------->bZIP60(2)                              <---------ZAT14
-DEAR3(1)            <---------ALFIN1                              <---------ZAT2
-HVH21             <------ZmHOX2a(2)                ------->TEIL   --------->ZAT2 ---------->DOF2  -
=MYC_MYB          --------->ARR14(2)    <---------At4g35610        --------->At4g35610           ---
-At1g77200        <---------ARR14(2)    --------->At4g35610        <---------At4g35610          <---
 
gcaaacctgaatactgactccgatccacatcatttggaattttagctggagattgaatctgagtctcttgagctgtgcagaaacgagaagcgagagtgta  12802900
            <---------LBD16
          --------->ARR14(2)
        <---------YAB1
      --------->YAB1     ------->TEIL
     --------->ICU4      --------->ARR14(2)
     <---------YAB1      --------->GLK1(2)
   -------->HAHB4        <---------ARR14(2)
   --------->YAB1     <---------------AGL15
   <---------ICU4    <-----------------AGL2    ------->TEIL <---------ANAC46
  <---------YAB1   --------->GLK1(2)    <---------TOE2(3)   <---------ANAC58
  --------->ICU4 <---------HSFC1(2)     <XXXXXXXXXXXXXXXXXXXXMIR397B
--------->YAB1   --------->HSFB2a(1)   --------->YAB1       <---------ANAC58
<---------ICU4   --------->HSFC1(2)  <---------WOX13(1)    <-------TEIL
-------->ICU4 --------->LBD16      --------->ATHB12----------->GT1                ------->TEIL
------>YAB1 ------>ZmHOX2a(2)     <---------YAB1   <------MYB83              <---------ICU4       <-
------YAB1<---------ARR14(2)      --------->ICU4   <------MYB46(1)           --------->YAB1  <<<<<<<
 
tgataatgatgatgatccggagtttctgaatctggtgatgattgatgatgtatttggtgaaattcgtgtgaggtttttgatcatgaacatcgcttcttct  12803000
                                                                  ---------->DOF2
                                                      --------->HSFB2a(1)
                                                      <---------HSFB2a(1)
                                                      <---------HSFC1(2)
                                                      --------->HSFC1(2)
                                                     <---------ARR11(3)                  <----------
                                                     <-----------ARR10                 <------ZmHOX2a(1)
                                                     --------->ARR11(3)           <---------MYB52(1)
                                <---------ANAC58     <---------ARR14(2)         <---------ANAC58
     ---------->ID1             <---------ANAC46     --------->GLK1(2)          <---------ANAC46   -
 --------------------->WRI1     <---------ANAC58     --------->ARR14(2)         <---------ANAC58   -
-----------------------ANAC81<---------MYB52(1)     <---------GLK1(2)    <---------WOX13(1)      ---
<<TBF1              ---------->ID1           <------------CBF    <---------WRKY38(1) <---------TOE2(3)
 
tcgtcttcgtcttcttcgtcttcgtcttcttcgttgtgtgtgtgtttgaattgaagaatcttcttcagtcaaagtgatggattccgtttaggaattggcc  12803100
                                                                                 <------MYB46(1)
                                                                                 <------MYB83
                                                                            <---------MYB46(3)
                                          --------->TOE2(3)                 <-----------RAV1(1)
                                        --------->GLK1(2)                  <---------WOX13(1)
                                       <---------ARR14(2)                  <---------YAB1
                                       --------->ARR11(3)                 <------------CBF
                                       <---------GLK1(2)                 <---------ICU4
                                       <---------ARR11(3)                --------->ATHB12
                                       --------->ARR14(2)                --------->YAB1
                                      <---------HSFC1(2)                 -------->HAHB4
                                      <---------HSFB2a(1)                <--------ATHB1
                                      --------->HSFB2a(1)               <---------YAB1
                                      --------->HSFC1(2)                <---------ATHB12
    <----------DOF2                  ----------->ARR10                  --------->ICU4       <------
--CBF                      <---------------AGL15              <---------ARR14(2) ----------->GT1  --
-------->LBD16             <---------HSFB2a(2)   <---------ANAC55(2)   <---------TOE2(3)    --------
----->ZmHOX2a(1)           --------------->AGL15 --------->ANAC55(2) <---------AHL20(2)<---------TOE2(3)
-------->RAV1(2)           --------->HSFB2a(2)  <---------ICU4--------->ARR14(2) <---------ANAC46---
 
tcctgagcttttgggagcatttgaatatttctcgatgaagaagattcttaataagtatttgggcctatctgtttaatgattgttgggtttaatgaataaa  12803200
                                                                                           <--------
                                                                                         --------->YAB1
                                                                                         <---------ICU4
                                                                               ----------->GT1
                              --------->YAB1                               <---------AHL20(2)     --
                           --------->YAB1                                  --------->AHL20(2)   <---
                         --------->AHL20(2)                            <---------ANAC55(2) ---------
---ICU4       <---------AHL20(2)               --------->AHL20(2)    --------->YAB1     <---------YAB1
------->ANAC46--------->AHL20(2)    <------------CBF                <---------ATHB12  <---------AHL20(2)
->AHL20(2)   --------->AHL20(2)  --------->YAB1<---------AHL20(2) --------->WOX13(1) <---------AHL20(2)
------>RAP2.6(3)     --------->AtLEC2         --------->AHL20(2)------------>CBF     --------->AHL20(2)
 
tacggcccatacacaaattaattcatgaaaaaataatcaaattgacctatttattttgtttatttcttccaatcacataaaaatgttatttattattatt  12803300
                                                                              --------->ARR11(3)
                                                                           <---------AHL20(2)
                                                                           --------->AHL20(2)
                                                                           --------->YAB1
    <----------DOF2                                                     --------->WOX13(1)
    <---------DAG2    ---------->DOF2                                  --------->AHL20(2)
-YAB1              <---------YAB1                                     <---------ATHB12
------->ZAT6     --------->YAB1                                     --------->WOX13(1)
--------GT1---------->ID1         <---------MYB52(1)           <---------YAB1 <---------AHL20(1)
>ICU4   --------------->AtSPL8   <----------DOF2 <---------MYB59  <---------WOX13(1)
 
aaccctacttttttgtcccattataaaaagtcttacctttaggctatttgtacataactcttcagtttgattaatcaattatatattcaaacaaaaaata  12803400
                                     ------->MYC3
                           <---------ICU4                              <---------MYB52(2)
              --------->HSFB2a(2)    <-------MYC3                      --------->MYB46(3)
              <---------HSFB2a(2)   ----------->GT1             <----------DOF2
      <------ZmHOX2a(2)   <---------AHL20(2)                 <-----------GT1
     --------->ARR11(3)   <---------ATHB51              <---------ANAC58
     <---------ARR11(3)   --------->ICU4                <---------ANAC58          --------->ATHB12
    <------ZmHOX2a(1)     --------->AHL20(2)            <---------ANAC46         <---------YAB1
    --------->YAB1    --------->AHL20(2)      <-------TEIL<---------ZAT6------->GAMYB
 
tgtgctaggatcatgttttagaaaatgaaataattaagcatgtgaaatatacatgaattgagtgttactttacaacaaacttatatgatttgttttcaga  12803500
<- Previous    Next ->

AGI:  At2g29990.1   
Description:  NDA2 (ALTERNATIVE NAD(P)H DEHYDROGENASE 2); NADH dehydrogenase. similar to ATNDI1/NDA1 (ALTERNATIVE NAD(P)H DEHYDROGENASE 1), NADH dehydrogenase [Arabidopsis thaliana] (TAIR:AT1G07180.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21440.1); similar to putative internal rotenone-insensitive NADH dehydrogenase [Solanum tuberosum] (GB:CAB52796.1); similar to unknown [Populus trichocarpa] (GB:ABK95883.1); contains InterPro domain FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027); contains InterPro domain Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region; (InterPro:IPR001327)
Range:  from: 12800417    to: 12802990    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

    printer-friendly version