Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                            --------->LBD16                        <------NtERF2                       --------->ABI4(1)                       ------>NtERF2                      --------->DEAR3(1)                      <---------ALFIN1                     --------->ATERF1(1)                    ------>NtERF2                   --------->ANAC46                   --------->ANAC58                   --------->ANAC58                  --------->ATERF1(1)                  --------->At4g35610                  <------NtERF2                 <---------RAP2.3(1)                 <---------ATERF1(1)                 <---------ERF1                 <---------RRTF1(1)                 <---------RAP2.6(1)                <---------RAP2.3(3)               <------NtERF2               <---------ZAT2               --------->At4g35610                         <---------ANAC55(1)               --------->ZAT2                              <---------ANAC55(2)               --------->ATERF1(1)                         --------->ANAC55(2)               <---------At4g35610                         <---------ANAC46               ----------->RAV1(2)                        <-------TEIL              <---------ATERF1(1)                       --------->ARR14(2)              ------>NtERF2                             <---------ARR14(2)             <---------DEAR3(1)                       --------->ANAC58            <---------LBD16                           --------->ANAC46                --------->YAB1            --------->LBD16                           --------->ANAC58               <<<<<<<<<ARR1           --------->ANAC46   <------ZmHOX2a(2)  <---------ZAT2                      <---------ATHB12          <---------LBD16--------->DEAR3(1)      --------->At4g35610                 <<<<<<<<<ARR2    <---------ATHB12<---------ATERF1(1)          --------->ZAT2                      <---------YAB1  --------->WOX13(1)<---------RAP2.3(1)        <---------ZAT18                     --------->WOX13(1) ---------ATHB12<---------DEAR3(1)<----------DOF2<---------At4g35610            --------->YAB1   ccatcaatcactcccgcggctgcgccaccgcgatccctttgcatactagggagctcacgatacgtatggaatctacaatcgatgacaatcatagtcgata  12733900                                                                     <------ZmHOX2a(1)                                                                   --------->LBD16                                                                  <-----------RAV1(2)                                                                  <---------LBD16                                                                <------ZmHOX2a(2)                                                                --------->CCA1(2)                                                               <---------ARR14(2)                                                               --------->ARR14(2)                                                               --------->AGP1                                                               --------->ARR11(3)                             <-------TEIL                     --------->GLK1(1)                    --------->MYB46(3)                        --------->At4g35610                   <<<<<<<<<GATA-3                         --------->At4g35610                   <<<<<<<<<GATA-1                         <---------At4g35610                   <<<<<<<<<GATA-4                        ------->GAMYB                    --------->ATHB12                   <<<<<<<<<GATA-2                     ----------->RAV1(1)              ----------->GT1                  --------->ARR14(2)                   =======================RAV      <-------------  <-------TEIL    ------->TEIL     --------->ARR11(3) <---------bZIP60(1)             --------->ZAT14 <--------P  --------->At4g35610 <-------TEIL         --------->bZIP60(1)             <---------ZAT14   caggttgattcaagccgatgaatccaccgagtacatacatcttgtaatcgattgtgacaacagcagatccaggaagcattgaaggaagtgaagtgatttg  12734000                                                                                    <------MYB83                                                                                    <---------ANAC46                                                        --------->ARR14(2)          <------MYB46(1)                                                        <---------ARR14(2)         --------->MYB52(2)                                                        --------->GLK1(2)          <---------DEAR3(1)                                              ---------->DOF2                      --------->MYB46(2)                              ----------------->AGL1   --------->GLK1(1)         <---------ARR14(2)                         --------------->AtSPL8        <---------GLK1(1)         --------->ARR14(2)               <-------TEIL  ------->TEIL <---------ARR11(3)                --------->MYB52(1)              --------->GLK1(2)          --------->GLK1(1)                 <---------ARR14(2)      --              --------->ARR14(1) --------->ZAT2    --------->ALFIN1        --------->ARR14(2)     ---              --------->CCA1(2)  <---------ZAT2 --------->DAG2         ---------->DOF2----------->HVH21           ----------->ARR10<-----------GT1<------ZmHOX2a(2)      ----------->GT1<---------MYB52(1)<- ----------TaNAC69(2)    <---------KAN4(2)--------->ARR11(3)     <---------TOE2(3) <---------MYB46(3)   tttgaactgtaatgagattcgatggagaatgtaccagcttgggagatcaaaaggtgggaatccgattgaggtataaagaaccggttcggtgaagcctagg  12734100                                                                                       --------->SPL7                                                                                     --------->LBD16                                                                               <---------ARR11(3)                                                                               --------->ARR11(3)                                                                              <---------GLK1(1)                                                                              --------->GLK1(1)                                                                           <---------ZAT6                 <---------ARR14(2)      --------->ARR14(2)              ----------->GT1   <---------ANAC46                    --------->ANAC58                <---------MYB52(1)   <---------ANAC58  --------->LBD16   <---------YAB1                <---------HSFB2a(2)     --------   <---------ANAC58 <---------ANAC46   --------->ANAC58              --------->HSFB2a(2)    --------- ------->ATERF1(1) <---------LBD16<------MYB46(1)                   <---------ANAC46 <---------SPL7 < --->NtERF2     <---------GLK1(1) <------MYB83 <----------DOF2     <---------LBD16  <---------HSFB2a(2) -----NtERF2    --------->GLK1(1)--------->MYB59     <---------At4g35610<--------P <---------LBD16  -   cgcgagcgtgtttggaagagttccggtgaagagattaggtcacgataggctttggagatgagagatagcttcgggtagtgatatctccggacgagtgcga  12734200                                                                                              -------                                                                                              <------                                                                                     ------>NtERF2                                                                                    --------->DEAR3(1)                                                                                    --------->RAP2.3(3)                                                                                    <---------ATERF1(2)                                                                                    --------->ATERF1(2)                                                                                    --------->RAP2.6(2)                                                                                    --------->DREB2C(2)                                                                                    --------->RRTF1(2)                                                                                    --------->RRTF1(3)                                                                                    --------->RAP2.3(2)                                                                                   --------->ATERF1(1)                                                                                   --------->RRTF1(1)                                                                                   <------NtERF2                                                                                   --------->RAP2.6(1)                                                                                   --------->ORA47(2)                                                                                   --------->RAP2.3(1)                                                                                   --------->ERF1                                                                                   --------->DEAR4(2)                                              --------->KAN4(2)                   ------>NtERF2                                              --------->ARR14(2)                  <---------RAP2.3(1)                            <----------DOF2   <---------ARR14(2)                  <---------ATERF1(1)                         <---------ARR11(3)  --------->KAN4(1)                  --------->At4g35610      <---------YAB1     --------->ARR11(3)  --------->HSFB2a(1)                --------->ATERF1(1) --------->YAB1    <---------HSFC1(1)        <---------HSFB2a(1)                <---------At4g35610 < <---------ICU4    <---------HSFB2a(2)       <---------KAN4(1)        <---------ANAC58     ---------- --------->ATHB12  --------->HSFC1(1)        <----------TaMYB80       <---------ANAC58     ========== ->ZAT18     --------->ARR11(3)             ---------->TaMYB80        --------------------->WRI1   <- >ALFIN1     <---------ARR11(3)             <---------KAN4(2)   <---------TOE2(3)--------->DEAR3(1)<- ---------YAB1     --------->HSFB2a(2)    <------ZmHOX2a(1)     <---------TOE1(3)<---------DEAR3(1)-- -------->ICU4    <---------LBD16<------ZmHOX2a(1)      <<<<<<<<<TBF1 <---------ANAC46<------NtERF2--   cgatgattacgatgagttcttctggaagttctttaggaatcggaggaatattctcttcttcttcttgaggtttcttgtttgcagcgccgccattagagcc  12734300                                          --------->ZAT2                                          <---------ZAT2                                          --------->At4g35610                                          <---------At4g35610                                       --------->TGA2(2)                                      <-----------TGA1                                      <<<<<<<<<<<AtbZIP1                                      <-----------HVH21                                     <---------ANAC46                                     <---------ANAC58                                     <---------ANAC55(2)                                     --------->O2                                     <---------TGA2(1)                                     --------->bZIP60(1)                                     <---------ANAC58                                     --------->bZIP60(2)                                     ===============================bZIP_DOF                                     <---------bZIP60(2)                                     <---------bZIP60(1)                                     --------->TGA2(1)                                     <---------O2       --------->HSFC1(2)            --------->TGA1a -->ZAT18                            <---------TGA1a ---ZAT18                           ----------->STF1 -----------HVH21                   <-----------STF1 >DOF2 <---------HSFC1(2)         ----------->TGA1        --------->DAG2 ========bZIP_DOF                 ----------->HVH21      ---------->DOF2 --------O2                      <-----------HVH21   <---------TOE1(3)                            --- --------TGA1a                  --------->ALFIN1     <---------TOE2(3)                            --- ------->O2                   <---------ANAC46      --------->MYB52(1)                 ---------->DOF2 ------->TGA1a             --------->DEAR3(1)       <---------DOF5.7(2)    --------->LBD16   --------   ctcgtcggaagtttcagagattacagccatcgccgtgtgacgtcagcagcgaattaacgtaaagcgagagcctaatccgagttttgaataaaagaaacaa  12734400     <---------YAB1                             --------->HSFB2a(2)                             -----   --------->YAB1                               <---------HSFB2a(2)             <------ZmHOX2a(1)  <---------YAB1                 ------------>CBF ----------->TBP             <---------TOE2(3) <---- ------>YAB1                <-----------TBP------->TEIL             <---------YAB1            <------ ------>AHL20(2)   <---------AHL20(2) --------->YAB1                ------------>CBF      ----------- ---->CBF         --------->AHL20(2) <---------ATHB51              <-----------GT1 ------------>CBF   taatatgataactgagagtattaaatcagtttttatacaataatgtatttctataagtacttctcatattttcaatgttttaggaatcaataaacaatta  12734500                                                                                  --------->MYB55(2)                                                                                  <---------MYB46(3)                                                                                 <---------AtMYB61                                                                       --------->AHL20(2)                                                                    --------->AHL20(1)                                                                    --------->ARR11(3)                                                                    <---------AHL20(1)                                                                    <---------ARR11(3)                                                                  --------->AHL20(1)                                              <-------MYC3        <---------AHL20(1)                             --------->ARR11(3)        <---------AHL20(2)    <---------At5g28300                             <---------ARR11(3)     <---------AHL20(2) <---------AHL20(2) ---->MYB52(1)           ---------->DOF2      ------->MYC3        --------->ARR11(3)  ----------->GT1 -------GT1          ----------->GT1       <---------ANAC58       <---------ARR11(3)<---------ANAC46 ---MYB52(2)      <------------CBF         <---------AtLEC2  ----------->GT1<-----------GT1 ->CBF         ------------>CBF            <---------ANAC58<---------LBD16  --------->MYB52(1)   acgagtttcttcaaaaatgcaattggtaaaagataatcagtttttgcatgtgatttttttattcggaaaatatttttttaacggtggtttgtaaaattta  12734600                              <---------YAB1                            --------->YAB1                            --------->ATHB12                  <-----------HVH21                            <---------ICU4             <---------AHL20(2)                           <---------ATHB12            --------->AHL20(2)             <---------ANAC46--------->TOE2(3)      --------->AHL20(2)                              <        <---------TOE2(3)  --------->ICU4          --------->AHL20(2)  ------->TEIL  <----------DOF2<   <----------DOF2       --------->YAB1        --------->AHL20(2)     <---------CCA1(2)         <----   gttttcttttaagttttgtgcaaacaaaaatcattaatggaagaatttataaaataaaaaaatgtgtcaaatgtatctcacaagtctctttgttctctct  12734700                                 <----------DOF2                              <---------TOE1(3)     <---------MYB46(3)      <-----------GT1  --------->YAB1 ---------TOE2(3)        <----------DOF2  --------->TOE2(2)                                        <- ---------YAB1   <---------AHL20(2)       --------->TOE1(2)                             ------------- ------DOF2      --------->AHL20(2)    <-----------GT1                ------->TEIL      <----------DOF2   ttaacattggtttcaatttttaattttcttttaagctttttttacctatgaaaattgagtcaaacgtctatgaacgtgactcacaagtctctttgttctc  12734800  Previous    Next  AGI:  At2g29810.1    Description:  kelch repeat-containing F-box family protein. Identical to Putative F-box/Kelch-repeat protein At2g29810 [Arabidopsis Thaliana] (GB:O82375); similar to kelch repeat-containing F-box family protein [Arabidopsis thaliana] (TAIR:AT2G29800.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71765.1); contains InterPro domain Kelch repeat type 1 (InterPro:IPR006652); contains InterPro domain Kelch-type beta propeller (InterPro:IPR015915); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain Kelch related (InterPro:IPR013089); contains InterPro domain Galactose oxidase/kelch, beta-propeller (InterPro: Range:  from: 12733179    to: 12734330    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version