Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                             --------->ZAT2                           <---------ZAT2                       --------->ANAC46                       --------->LBD16                      <---------HSFB2a(2)                      --------->HSFB2a(2)                <---------TOE2(3)                <---------TOE1(3)          <---------ARR11(3)          --------->ARR11(3)       <------ZmHOX2a(1)--------->LBD16                       --------->YAB1 ----------------->AGL1 -->bZIP60(2)   <---------YAB1            ----------->GT1<---------YAB1 --------->ZAT14---------->DOF2   cgttttgaaggagatgttatggttcccgaagctagggtttgagatggtgaagaagactgatgaataataggctgagtagtccattgaaggaaagtagacg  12691800                                     --------->ARR11(3)     <-------TEIL                                     <---------ARR11(3)    --------->CCA1(2)                <---------ALFIN1  <---------WOX13(1)       --------->ARR14(1)       <----------DOF2         <---------YAB1             --------->ARR14(2)                        -  --------->HSFC1(2)           ------>ZmHOX2a(1)          --------->ARR11(1)                 <-------  <---------HSFC1(2)       <-----------GT1  ------->TEIL  <---------ARR14(2)                 <-------   aagaagctactttcacccccatgcgaaattttcctgatagatattgaatctgaatttgaagattcgaaacagagagactagtttcttcaacaatggcttc  12691900                                             --------->ARR11(3)                                             <---------ARR11(3)                                            --------->YAB1                                         --------->YAB1                                         <---------ICU4                                         <----                                        <---------ATHB12                                  -----------                                    --------->ZAT18                                 <---------ZAT6                                   <<<<<<<<<GATA-4                    ----------->GT1    --------->DAG2       <---------GLK1(2)           <<<<<<<<<GATA-1          <---------ICU4      <---------ARR14(2)  - ----->ZmHOX2a(1)  --------->YAB1  <<<<<<<<<GATA-2          --------->ATHB12    --------->ARR14(2)  < --ANAC58         <---------ATHB12 <<<<<<<<<GATA-3          -------->ATHB1 <---------ARR14(2)  ------ --ANAC58   ------>ZmHOX2a(1)     --------->ARR14(2)       <---------ATHB12--------->ARR14(2)  <-----   tccttattagattcctgtaaatcataagagaaattgaatccactaattatcttgagattgaatcattgaagatggcaaatcggatagtggaaaggtaatg  12692000 -------HVH21                                       <------ZmHOX2a(1) >GT1--------->GLK1(2)                   ----------->GT1                                          --- -------->O2                             <---------ANAC55(2)       --------->LBD16               <--- ---------O2                            --------->MYB59          <---------LBD16           --------->HSFB2a(2) --->bZIP60(1)  <---------WRKY12   --------->AHL20(2) ----------->GT1                      <---------LBD16 ----bZIP60(1) <-------TEIL  ----------->GT1---------->DOF2     --------->MYB52(1)         <---------HSFB2a(2)   tcacgagaatcgatgggttcaacgaattagtaagaaaaaaaataggtaaagagaggaagaaaaactcaccggaaaatttaagtctgaaattttctcggag  12692100                        ------>ZmHOX2a(1)                      ----------->RAV1(2)                    <---------ARR14(2)                    --------->ARR11(3)                    --------->ARR14(2)                    --------->GLK1(2)                           *TSS                  ---------->TaMYB80                         <------NtERF2                  ----------->ARR10                       <<<<<<<<<<CAMTA2               --------->LBD16           <---------DAG2   <---------LBD16            <---------LBD16              <----------DOF2  <<<<<<<<<<CAMTA3                --------->AHL20(2) <---------------------WRI1   <---------DEAR3(1)          <<<<<<<<<<CAMTA5             <----------DOF2 ------->DOF2<---------LBD16<------ZmHOX2a(1) <---------YAB1--------->LBD16     --------->At4g35610 ---ZmHOX2a(1)<---------HSFB2a(2)   <----------DOF2       <<<<<<<<<<CAMTA1    <------ZmHOX2a(1)   <--   gaaagcgaaactcactcgggaaaatcctgaggaaggcgcttcacttttattttagtagaacgcggagagagagagagtgaggagatgagcttttatatac  12692200                                                                 --------->AHL20(1)                                                                --------->AHL20(2)                                                             <---------AHL20(2)                                                            --------->AHL20(2)                                                        <---------AHL20(2)                    <---------ANAC58                    --------->AHL20(2)                <-------GAMYB   <---------YAB1          --------->AHL20(1)               <-----------RAV1(1)                     --------->AHL20(2)                        ----               --------->MYB52(2)                  <---------AHL20(2)                            ----               <---------MYB46(3)                  --------->AHL20(1)               ----------->GT1     --------->ANAC58<---------ZAT18               --------->AHL20(2)  <---------LBD16           <---     --------->ANAC58--------->ZAT18              --------->AHL20(2)----------->HVH21<-------GAMYB  - <-----------HVH21  <---------ANAC58      --------->RVE1(1) <---------AHL20(2)---------->DOF2   <---- -------At4g35610   <---------ANAC46------>ZmHOX2a(2)  <---------AHL20(2)--------->LBD16      -------   agatgtcaaggaagggtttgttgcgcacgagtttatgatcgaaaatatcgaaattaattaaattaaatatatgaccgggttaaagccggttatacagcga  12692300                                       ------>MYB46(1)                                       ------>MYB83      --------->At4g35610            --------->DEAR3(1)     <---------ARR14(2)    ----------->HVH21                                            ----------->HVH21     --------->GLK1(2)   ----------->GT1       --------->ATHB12                       <---------At4g35610     --------->ARR14(2)  --------->At4g35610  --------->ICU4                  <---------YAB1    <---------GLK1(2)    --------->LBD16      <---------YAB1                 <---------AHL20(1) ----->ANAC58           <---------DEAR3(1)  --------->ANAC55(2)              <---------AHL20(2) ----->ANAC58    --------->ANAC58   --------->DEAR3(2)                     <---------YAB1--------->MYB52(1) ------ANAC46--------->ANAC58     --------->ARR14(2)             --------->ICU4   <-----------GT1 <-- --------->DOF2  --------->ANAC58 <---------ARR14(2)   --------->LBD16  --------->ICU4--------->At4g35610 -------------------TaNAC69(2)  --------->ANAC58     <---------LBD16    --------->AHL20(2)        <-- -->DEAR3(1) --------->ANAC58   --------->ANAC58   <-----------GT1   <------ZmHOX2a(1)----------->RAV1(2)   cgtaaagaatctgacaaacaagtaagccggtgacaagaaccgactcacatgattaaccggagatgtcattaggatttattatttttacatctgacggttt  12692400                                                                                  <-----------GT1                                                                         --------->SPL7                                                                       <---------SPL7                                                                       --------->ZAT18                                                                       <---------ZAT14                                                                      --------->ANAC55(2)                                                                      <---------ANAC55(2)                                                                      <---------ANAC46             <- --------->CCA1(2)                             ----------->HVH21      <---------ANAC58    <---------AHL20(2) -------YAB1                      <----------DOF2                     <---------ANAC58   --------->AHL20(2) -------TOE2(3)  --------->HSFB2a(2)   ---------->ID1                --------------->AtSPL8      <---   aagatagaccaagtgtctcccagactattgggttttcttttgtcattttctgacaactagtactagtgtattgcgtactgtattttgccaatttaaaatt  12692500                                                                 <---------AHL20(2)                                                               <---------AHL20(2)                                                           <---------AHL20(2)                                                           --------->AHL20(2)                                                          --------->AHL20(1)                                                          <---------AHL20(2)                                                          <---------AHL20(1)                                                          --------->AHL20(2)          ------->GAMYB                                <---------AHL20(2)       --------->MYB52(1)       <---------CCA1(1)      --------->ATHB51      <---------WRKY38(1)       <---------RVE1(1)      <---------ICU4     <---------ATHB12          --------->ARR11(3)     <---------YAB1                --------->ALFIN1     --------->MYB46(3)        <---------ARR11(3)     --------->ICU4                <---------ZAT6    ------>MYB46(1)       --------->AtLEC2        <---------ARR11(3)                ----------->GT1    ------>MYB83     --------->ANAC58             --------->ARR11(3)             <------ZmHOX2a(1)   --------->WOX13(1)--------->ANAC58  <---------ANAC58--------->AHL20(2) <---------AHL20(2) ----------GT1      --------->DAG2     <---------ANAC58<--------ATHB1     --------->AHL20(2)    <---- ------AHL20(2)    ---------->DOF2   <-----------GT1--------->YAB1    ----------->GT1        --------   taaaccaatcaacggtcttggaaaagccatgtagatattttacttgctgtaagataataatttattttaaaatggtttaattaggagtgtgaaaatagta  12692600                                   --------->LBD16                                  <---------ANAC46                                  --------->ANAC55(2)                                  <---------ANAC55(2)                               --------->PCF2                              --------->TCP20                              --------->TCP15(1)                     --------->ALFIN1                              <---------PCF2                       <---------ANAC46                             <------MYB83                     <----------DOF2                             <---------TCP15(2)            <---------DOF5.7(2)            <---------ANAC58                             <------MYB46(1)             --------->DOF5.7(2)              <---------ANAC46      <---------AtLEC2      <---------MYB46(3)         <---------ANAC58       <-----------RAV1(1)  <- -------GT1                --------->ALFIN1            <---------ANAC46       --------->ALFIN1------- ->YAB1              ---------->DOF2   <---------ZAT6  <---------ANAC58   <--------P      <---------ANAC58   acagttttgcaagaaggtatgctaaaagagtgggtcccgtagtgtccatgtaatctggcgttaactttgatgtgtggtaagtgttgcgatttgcgtctat  12692700  Previous    Next  AGI:  At2g29670.1    Description:  binding. similar to binding [Arabidopsis thaliana] (TAIR:AT1G07280.3); similar to binding [Arabidopsis thaliana] (TAIR:AT1G07280.2); similar to binding [Arabidopsis thaliana] (TAIR:AT1G07280.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN79749.1); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990); contains InterPro domain Tetratricopeptide region (InterPro:IPR013026) Range:  from: 12689035    to: 12692164    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version