Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                     <------ZmHOX2a(2)                                                                           --------->AHL20(1)                                                                           <---------ARR11(3)                                                                           --------->ARR11(3) ----------HVH21          <---------AHL20(2)                              <---------AHL20(2) --AHL20(2)           <----------DOF2      ------>ZmHOX2a(2)          --------->YAB1 -AHL20(2)          ---------->ID1        <---------YAB1              <---------AHL20(2) >AHL20(1)         <-----------GT1       <---------ARR11(3)           --------->AHL20(2)      ------- -AHL20(1)     <---------ARR11(3)        --------->ARR11(3)       --------->AHL20(2)          <------ >AHL20(2)   <---------YAB1   --------->YAB1<----------DOF2     --------->TOE2(3)  ==================   gtgtcagtgaataacatgatttttctttttaatcaaaaaacatgatctttgtatactaattctgaaacttaattatatatattcgatccaatctagtaaa  12461700                     --------->ANAC46                     --------->ANAC58                     --------->ANAC58         --------->TOE2(3)                   --------->MYB52(1)   --------->ANAC58                ------>ZmHOX2a(2)       --------->ANAC58               <------ZmHOX2a(2)      ---------->DOF2                                         <------NtERF2        ==============HOX2a_HOX2a   --------->ANAC58     <----------DOF2                      -------        ===============HOX2a_HOX2a  --------->ANAC58  --------->ARR11(3)                      <------        <------ZmHOX2a(1)   --------->ANAC55(2)  --------->AHL20(2)                          <------- -->ZAT14     --------->ARR14(2)    --------->ANAC46  <---------ARR11(3)                    <-------- ---ZAT14     <---------ARR14(2)   --------->LBD16   <---------CCA1(2)                   <---------AtMYB61 ==============HOX2a_HOX2a  <---------ANAC55(2)<----------DOF2  <---------HSFB2a(2)<---------MYB52(1)   ctagtttataggacgggatccaaacgaaatacttatccacgaaagaaacctttatatatctttgtgctcgaaagttttctcattcgttattttggtggct  12461800                      <---------ATHB12                    ------>MYB83        ------------>CBF                    ------>MYB46(1)    --------->ANAC46            --------->ARR11(3)         --------->ANAC58            <---------ARR14(2)         --------->ANAC58                <---------At4g35610   --------------->AGL15             ---------->DOF2                   --------->At4g35610   <-------   <---------------AGL15    <-----------GT1   ---------->DOF2          ----------->RAV1(2)  <-------- -->At4g35610  <-----------GT1     --------->ANAC46                 <------ZmHOX2a(2)       <-------- ---At4g35610--------->CCA1(2)     --------->ANAC58                <---------ARR11(3)       <-------- --MYB46(3) <---------ARR11(3)     --------->ANAC58                --------->ARR11(3)      <-------TEIL -RAP2.6(2) --------->ARR14(2)  --------->ZAT14            ---------->DOF2       <-----------GT1   <-   gactactaaatgaagatataccaaatgatttttcttcactcaagcaatttaagcacatagacaaagtaagatcatctggcgataaaccatacattcgtgg  12461900                                                                                    <-----------GT1                                                                               <---------AHL20(2)                                                                               --------->AHL20(2)                                                                              --------->AHL20(2)                                                                           --------->AHL20(2)                                                                        <---------ICU4           ----                         --------->At4g35610                            <--------HAHB4           ----               ----------->HVH21                                        --------->YAB1         ------  <---------KAN4(2)      ----------->RAV1(2)                           <---------YAB1          <----- --LBD16       ----------->TGA1                                        <------ZmHOX2a(2)    --------- -ANAC58     --------->ANAC46                               <---------ICU4 --------->ATHB51--------->ANAC46 -ANAC58   <---------ALFIN1--------->LBD16                 <---------YAB1 <---------YAB1  <---------LBD16 -ANAC46 ------>ZmHOX2a(1) ------>ZmHOX2a(1)           <---------WOX13(1) --------->ICU4-------->P -----ZmHOX2a(1)  <---------bZIP60(2)           --------->ANAC46      <---------ARR11(3)<---------REM1(2)   aggaaatattcctacacatgacgagtctcctgaacatatacaactattcaacaccagattgattatttccacgatcattatttaattttctacccggagt  12462000                                                             ----------------------->TaNAC69(2)            <---------AHL20(2)                       <----------DOF2 <----------DOF2                                  <---------ARR11(1) ----->WRKY38(1)                                  <---------ARR11(3) ----->WRKY12                                     --------->ARR11(3)          <----------DOF2 --->At4g35610                                    <---------ARR14(2)  --------->ANAC58 ----At4g35610                                    --------->ARR14(2)  --------->ANAC46  <---------ANAC58 >LBD16    <-----------GT1                       <---------CCA1(2)    --------->ANAC58  <---------ANAC58   tgacttttgtatatttcattccaacttatacatgaggtatctctcagttccatatcttttgcagttttccctaagcaagtctttgttttttcttgagtac  12462100                                                                <----------DOF2                                                  ------------>ATHB5                 ------>ZmHOX2a(2)          <-----------RAV1(1)--------->TOE2(3)             <---------ZAT6                 <---------MYB46(3)--------->HSFB2a(1)         <---------ARR14(2)              <----------DOF2      <---------HSFB2a(1)     <---------TOE1(2)         --------->ARR14(2)             <---------DAG2  <---------WOX13(1)           <-----------RAV1(2)       --------->LBD16               <-----------GT1  --------->ATHB12     --------->ATHB12     <---------LBD16                <-------TEIL  ----------------->AGL1   --------->ATHB51      ----    --------->MYB52(1)            --------->ARR14(2) <---------YAB1       <---------YAB1  <------ZmHOX2a(2)   --------->ARR14(2)             <---------ARR14(2) --------->ICU4 ---------->ID1   <---------LBD16   <---------ARR14(2)           <---------YAB1    <-----------------AGL1  --------->ICU4<------ZmHOX2a(1)   tagagaaaccggatagtgatcgagagagaacatgaagattcaccttttgttggccatgattggaacctttgtcgttataattggagcccaggatcaagaa  12462200                                               ----------->GT1                                             <---------ANAC58                                             <---------ANAC58                              <---------ICU4                                             <---------ANAC46                              --------->ATHB12                                          --------->WRKY12                                --------->AHL20(2)         <-----------GT1           --------->WOX13(1)                            <----------DOF2 <---   --------->YAB1    <---------ANAC58   <----------DOF2                          <---------DAG2 <----  <---------YAB1     <---------ANAC58   ------>ZmHOX2a(1)                     <-----------GT1   <----  --------->ICU4  <----------DOF2<---------ATHB12                           <---------ARR11(3)  <---- ------->GT1  <---------CCA1(2)--------->WOX13(1)     ----------->GT1 ------->TEIL  ---------->ID1   ggtaatgatatataccatctctttcttgtttataaatcaatcctttgacttgtgatatgttatataagaatgtatcaatatcacttttcccatttattgc  12462300                                                        ------>ZmHOX2a(1)                                                   --------->GLK1(1)                                                   --------->HSFB2a(1)                                                  <-----------ARR10                                                  --------->ARR14(2)  <---------YAB1                                  ------->TEIL                   <---------YAB1 -------DOF2                                      --------->GLK1(2)     <-----------GT1       ------- -----ANAC58                                      <---------ARR14(2)    --------->MYB52(1)    <------ -----ANAC46               <<<<<<<<<RAP2.2  ----------->TGA1   --------->ATHB12  <---------TOE2(3) -----ANAC58              <---------TOE2(3) ----------->HVH21 <---------YAB1    <-----------GT1   ttttatatttgaacaggtttcatcagtttagattgtggattacctagtgacgaatctccttacgatgattcgtttaacggattaacattcacatcggatt  12462400                                              --------->YAB1                                         ------>ZmHOX2a(2)                                        <------ZmHOX2a(2)                                       --------->ARR14(3)                                       <---------ARR14(3)                                       <---------AGP1                                       <-----------ARR10                                          ---                                       <---------ARR14(2)                                         ---               ================================HOX2a_HOX2a                                        <--               <------ZmHOX2a(1)       --------->ARR11(3)                                         ---               =================================HOX2a_HOX2a                                       ---      --------->AtLEC2                 <---------ARR11(3)                              <---------HSFB2a(2)      <-----------------AGL1           --------->ARR14(2)                              --------->HSFB2a(2) <----------DOF2                      --------->RVE1(1)  --------->YAB1          <---------HSFC1(2) -->ARR14(2)  ----------->GT1      ---------->DOF2      <---------YAB1           --------->HSFC1(2) ---ARR14(2) ----------->GT1   <---------ETT(2)--------->TOE2(3)               <---------GLK1(2)  ---   ccactttcatccaaacaggaaaaattgatagtgtcgataaagatcttaacataaacttatcaaaacaatatttgactcttagatacttcccagaaggaaa  12462500      <---------YAB1   --------->ICU4                                                        --------->YAB1 ------>ANAC58                                                          <---------YAB1 ------>ANAC58                                                        <---------ICU4 -------ANAC55(2)          --------->ALFIN1            <----------DOF2--------->YAB1 ------>ANAC46           <---------ANAC58         <---------MYB52(1) <---------ATHB51      ------>ZmHOX2a(2) ------>ANAC55(1)        <---------ANAC58         <--------P    ----------->GT1      ------->GAMYB ------>ANAC55(2)  <-----------HVH21            <---------MYB46(3)   --------->ICU4<---------At5g28300   acgtaattgttatagtcttgatgtcaagcgtggcacaacttatctcatcgtggttagctttgtatatggaaattatgatggtcttaaccgtgatccaaac  12462600  Previous    Next  AGI:  At2g28990.1    Description:  leucine-rich repeat protein kinase, putative. similar to leucine-rich repeat protein kinase, putative [Arabidopsis thaliana] (TAIR:AT1G51850.1); similar to leucine-rich repeat protein kinase, putative [Arabidopsis thaliana] (TAIR:AT2G28970.1); similar to leucine-rich repeat protein kinase, putative [Arabidopsis thaliana] (TAIR:AT1G51820.1); similar to leaf senescence-associated receptor-like protein kinase [Phaseolus vulgaris] (GB:AAG00510.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45781.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009 Range:  from: 12462132    to: 12466618    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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