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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                                   <---------AHL20(2)
                                                                  <---------AHL20(1)
                              <-----------GT1                     <---------AHL20(2)
                           <---------YAB1                         --------->AHL20(2)
                       ------>ZmHOX2a(2)                       --------->AHL20(2)
                      <------ZmHOX2a(2)                        <--------ATHB1
                      --------->GLK1(1)                        <---------AHL20(2)
                      <---------GLK1(1)                        --------->YAB1
                     <---------AGP1                            <---------AHL20(1)       <-----------GT1
                     <-----------ARR10                      --------->YAB1        <---------MYB52(1)
                     <---------ARR14(2)                    <---------YAB1        <---------MYB52(1)
                     --------->ARR11(3)                  --------->YAB1    <---------GLK1(1)
                     --------->ARR14(2)       --------->ANAC58 <---------ICU4   ----------->GT1
                     <---------ARR11(3)       --------->ANAC46<---------YAB1    --------->LBD16
                    =======================HOX2a_HOX2a  <---------YAB1 <---------HSFB2a(2)
                    <------ZmHOX2a(1)         --------->ANAC58--------->ICU4  <---------LBD16
-->GT1            <---------TOE2(3) <------ZmHOX2a(2) <---------CCA1(2)--------->HSFB2a(2)
 
aattgttcaaaaacacagttttaggatctcattatacagatcaaatcacacgaattcatatcataataatttttttggaagtccggttattttactaatt  12385000
                    --------->TOE2(3)
               <---------YAB1
             --------->YAB1                                                               <---------ZAT18
            <---------YAB1                                                                --------->ZAT18
       --------->ARR11(3)                                                            <---------ANAC46
       <---------ARR11(3)                                                            <---------ANAC58
      <---------CCA1(2)                                  ----------->GT1             <---------ANAC58
  ----------->RAV1(1)            --------->ALFIN1 --------->At5g28300     <---------AHL20(2)
------>ZmHOX2a(2) ------->TEIL--------->ARR11(3) ----------->GT1          --------->AHL20(2)
 
tgatccaacatatctatgatgaatcttagttaagatgtggtgatcactcaaacagtaaatttgtaaattttgttcattaaaatcagtttcttgtggacaa  12385100
    ------>ZmHOX2a(1)                   ---------->DOF2
    <---------------AGL15        --------->AHL20(2)
    --------------->AGL15    --------->AHL20(2)
   <-----------------AGL2    <---------AHL20(2)                                              -------
   ----------------->AGL3    <---------YAB1             --------->ANAC46                     <------
   <-----------------AG--------->AHL20(2)               --------->ANAC58                    --------
   <-----------------AGL1   <---------AHL20(1)      --------->CCA1(2)            --------->AHL20(2)
   ----------------->AGL2   --------->AHL20(1)  --------->DAG2                  --------->YAB1  ----
   <-----------------AGL3   --------->AHL20(2) ---------->DOF2  --------->AHL20(2)          --------
 ------>MYB46(1)   ---------->DOF2   --------->TOE2(3)  --------->ANAC58       --------->AHL20(2)
 ------>MYB83    <---------ATHB12<---------AHL20(2)<----------ID1        <------NtERF2----------->GT1
 
aaccatcctatttttggcaaatcaaagaaaatataattaatctcaaagaaaaaagctacaagaaaaaaaaaatggcctcaaaataaaaatagaaaatatc  12385200
                                                                                 --------->SPL7
                                                                                --------->ALFIN1
                                                                                <---------MYB52(1)
                                                       xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
                                                       xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)
                      --------->MYB52(1)              xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)
                   --------->ANAC58                   xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
                   --------->ANAC58                  xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
         --------->ANAC58                            xxxxxxxxxxxxxxxxxxxx>smallRNA(le3) --------->ARR14(2)
         --------->ANAC58                           xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)  <---------ARR14(2)
        --------->HSFB2a(2)                         xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)--------->GLK1(1)
-->ARR11(3)        --------->ANAC55(1)             xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) <---------GLK1(1)
---ARR11(3)        --------->ANAC46         ----------->GT1                    <-----------HVH21
->RVE1(1)--------->LBD16                   ------->GAMYBxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)  ------>ZmHOX2a(1)
------->HVH21  --------->YAB1    --------->MYB52(1)xxxxxxxxxxxxxxxxxxxx>smallRNA(le3) ----------->ARR10
->CCA1(1)--------->ANAC46----------->GT1--------->MYB52(1)                    --------->ANAC46
 
tgacaagactgcccgaaatcacaagtaactgtaacaaaactgacaacgggcaaaaaaaaaaaaaaaaaaaaaaaaaactgcccgtcgggcaaatcctcca  12385300
                                                                                     <---------ARR11(3)
                                                                                     --------->ARR14(2)
                                                                                     --------->ARR11(3)
                                                                                     <-----------ARR10
                                                                                    --------->CCA1(1)
                                                                                    --------->RVE1(1)
                                                                                 --------->AHL20(2)
                                                                                 <---------AHL20(2)
                                                                                --------->AHL20(2)
                                                                          --------->AHL20(2)
                                                                          <---------AHL20(2)
                                                    ----------->TBP  --------->AHL20(2)
                       <---------CCA1(2)        <---------DAG2       <---------AHL20(2)
             <----------DOF2            <---------AHL20(2)<----------ID1 --------->AHL20(2)        <
       <---------CCA1(2)       <----------DOF2  <----------DOF2     --------->AHL20(2)         -----
 
atagagagtcgtctctctttatctccgtctctctcttttttttttaatcaactttataaaaaaaacaaaaaaaaaatttaaaaattaatatcttctcaac  12385400
                                                                                                 <--
                                                                                                <---
                                                                                        <---------MYB52(1)
                                                                                        ----------->HVH21
                                                                                 <---------MYB52(1)
                                                                            --------->AtMYB61  -----
                                                                            <---------ALFIN1   <----
                                                                            ------->GAMYB      -----
                                <------------------------ANAC81            <---------MYB52(2)  <----
                            --------->ARR14(2)                             --------->MYB46(3) ------
            --------------->AtSPL8                                    --------->ANAC46 <-----------TGA1
       ------------>CBF     ------->TEIL                              --------->ANAC58 <-----------HVH21
---------ATHB12             <---------ARR14(2)         ----------->GT1--------->ANAC58--------->ANAC46
---->MYB46(3)*TSS          <---------CCA1(2) <<<<<<<<<TBF1  ---------->DOF2<---------MYB55(2) <-----
 
aaatgactctatcaatgtgtacataaatgtgaatcttcttccctcttcttcttctccattgttaaaagctctcacacaaccaccgttctccgtcacggtg  12385500
<---------DAG2
<----------DOF2                           <---------ANAC46
-------ANAC46                       <---------DEAR3(1)
---NtERF2                       <-----------RAV1(2)                     --------->YAB1
->NtERF2                       <------NtERF2<---------MYB52(1)         --------->MYB46(3)
-----ERF1                     ------>NtERF2<-------GAMYB               <---------ATHB12    ---------
---->ABI4(2)                 --------->ALFIN1                      <---------ATHB12 <---------REM1(2)
-----ATERF1(1)              <---------MYB52(1)     ------>ZmHOX2a(1) --------->WOX13(1)--------->ANAC46
--->ALFIN1             <---------ALFIN1  <------NtERF2        --------->TOE2(3)  <----------DOF2   -
----DEAR3(1)          ----------->HVH21--------->ALFIN1 ------>ZmHOX2a(1)    <---------CCA1(2)    --
 
gcgctttattctctcatcggagcgcctcaccggtggcagacggtgtcgttgttcctctcctaaaacctccatcaatcaccatctctttacacagagctct  12385600
                                                          --------->KAN4(2)
                                                          <---------ARR14(2)
                                                          --------->ARR14(2)
                                                         --------->KAN4(1)
                                                         <---------HSFC1(2)
                                                         <----------TaMYB80
                                                         <---------KAN4(1)
                                                        ---------->TaMYB80
                                                        <---------KAN4(2)                         <-
                                                    --------->ANAC55(1)       ------>NtERF2       <-
                                                    --------->ANAC55(2)       <------NtERF2       --
               --------->ALFIN1                     --------->ANAC58         <---------RAP2.3(1)  <-
             --------->CCA1(2)                      --------->ANAC58       <---------ZAT14        <-
         <---------HSFB2a(2)                        --------->ANAC46       --------->ZAT14        ==
   --------->GLK1(2)                          --------->LBD16         <---------ZAT14             <-
   --------->ARR14(3)                    <---------ETT(2)--------->HSFB2a(1)<---------DEAR3(1)   <--
   <---------ARR14(3)                    --------->ETT(2)<---------HSFB2a(1)<---------RAP2.6(2) <---
   --------->ARR11(3)             --------->ALFIN1  <---------ANAC55(2)    --------->SPL7      -----
   --------->ARR14(2)           <---------ANAC46   <---------LBD16    --------->ZAT14  <---------YAB1
   <---------ARR11(3)         --------->ZAT2<---------LBD16         <---------ZAT14  --------->YAB1
>GLK1(1) --------->HSFB2a(2)  <---------At4g35610--------->ZAT2     --------->ZAT14<---------ARR11(3)
-------->TOE2(3)              --------->At4g35610<---------ZAT2 ------------------>SPL14    <-------
------->MYB46(3)      <------NtERF2    ----------------------->TaNAC69(2) --------->ALFIN1  --------
 
aaccaaaatcttcgagagatggggcagagtatgagctgtggaagtcgaccggagcacggaatattcgcctctgtacagtgcggcgatatcatcactatcc  12385700
         ------>NtERF2
        <---------DEAR3(1)
        --------->ETT(2)
  ----------->HVH21
<---------ANAC46
--------ANAC46
--------TGA1a
------->TGA1a                                                                      <-----------HVH21
--------ANAC58                                                              <---------At4g35610<----
--------ANAC58          <-------GAMYB                                     <-----------------AGL2 ---
================================MYC_MYB                                  --------->ZAT2 <---------ARR14(2)
--------O2  <---------ATERF1(1)                                          --------->At4g35610   <----
-------MYB52(1)         --------->At4g35610      ------>ZmHOX2a(2)       <---------ZAT2 --------->AGP1
--------HVH21  ------>NtERF2                  --------->YAB1             <---------At4g35610<-------
---->ANAC46<---------DEAR3(1)                <---------YAB1           <---------At4g35610<------ZmHOX2a(2)
--ARR14(2)<------NtERF2<---------MYB46(3) ==============HOX2a_HOX2a<-----------HVH21    --------->ARR14(2)
->ARR14(2)--------->ATERF1(1)             ------>ZmHOX2a(1)       <-----------RAV1(1)  --------->At4g35610
 
gtcgtgtgatggcgacggagcctagtctgttgaatcaaactactccttatgatcgtcactctgttcttcatgtcgctgctgctaatggtcagatcgaggt  12385800
                              --------->GLK1(2)
                             <---------ARR14(2)
                             --------->ARR14(2)
                             <---------GLK1(2)
                            <------NtERF2
                           --------->LBD16
                          --------->LBD16
                     ------>ZmHOX2a(2)                                                            --
                   <---------ARR14(3)                                                             <-
                   --------->ARR14(3)                                                          <----
                   --------->ARR11(3)                                                         <-----
                   <---------ARR11(3)                                             --------->ARR11(3)
                   <---------ARR14(2)         <---------MYB52(1)                  --------->ARR14(2)
       --------->ARR11(3)<---------LBD16     ----------->GT1                      <---------ARR11(3)
----P --------->YAB1<------ZmHOX2a(2)    <---------ARR14(2)            <---------DAG2         <-----
------>MYB52(2)    --------->ARR14(2)    --------->ARR14(2)            <----------DOF2  <---------YAB1
-----MYB52(1)   --------->LBD16          --------->GLK1(2)       ------->TEIL     <---------GLK1(2)
--TOE2(3)       --------->HSFB2a(2)     <---------GLK1(2)       <---------CCA1(2) <---------ARR14(2)
 
tagtttcagtgatattctccgagatctcgccggaatctcgtcggaatctggtatttttgtttctgatgtatctactttttttgcagattttgtcattgct  12385900
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AGI:  At2g28840.1   
Description:  ankyrin repeat family protein. similar to ankyrin repeat family protein [Arabidopsis thaliana] (TAIR:AT5G07270.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21674.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841); contains InterPro domain Ankyrin (InterPro:IPR002110)
Range:  from: 12385414    to: 12387819    Orientation: Forward
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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