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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                                              ------>ZmHOX2a(2)
                                                                             <------ZmHOX2a(2)
                                                                             --------->CCA1(2)
                                                                            --------->ARR11(3)
                          ------>MYB46(1)                                   <-----------ARR10
           ------>ZmHOX2a(2)       --------->WOX13(1)                       --------->AGP1
           ==========================HOX2a_HOX2a                            <---------ARR14(2)
         <---------ARR11(3)   <------ZmHOX2a(1)  <-----------GT1            <---------AGP1
     --------->ANAC55(2)  -------->P       <-------TEIL                     --------->ARR14(2)
     <---------ANAC55(2)  --------->MYB52(1)--------->YAB1                  <---------ARR11(3)
 <-----------HVH21        ------>MYB83   <---------GLK1(2)                 <---------CCA1(2)
--------->AtMYB61    <---------ALFIN1<---------ATHB12               <---------ZAT14
---------GT1       ----------->RAV1(1)--------->YAB1                --------->ZAT14  <---------YAB1
 
tcaccatcacttgatctctctccaacacctacaggaatcaatcagattcatatttcgatttcgatttcaactacactcagatctaagtatgtttagaatc  12377400
                                                  <---------ARR14(2)
                                                  --------->ARR14(2)
                                                 --------->GLK1(1)
                                                 <---------GLK1(1)
             ----------->GT1                 --------->ANAC58
           <-----------RAV1(2)               --------->ANAC58
        --------->ANAC58                   ---------->DOF2<---------AtLEC2             ---------->DOF2
        --------->ANAC46               ---------->DOF2------>ZmHOX2a(1)      --------->MYB52(1)
        --------->ANAC58            <---------TOE2(3)--------->TOE2(3)    <---------ANAC58
      <---------ALFIN1             --------->MYB52(1)--------->TOE1(3)    <---------ANAC58
 
gaaatactcacacaccaggtaaattttgctaacatggctaacgaaagaaagcaaatccttagcatgaagaagcgattgcttaacagataacaaagcattc  12377500
                                             <------ZmHOX2a(1)
                                         --------->TOE2(2)
                                         --------->TOE1(2)
                               ------>ZmHOX2a(2)                   <------NtERF2
                  --------->ATHB12  <-----------------AGL1        --------->LBD16
                 ------>ZmHOX2a(1)  ----------------->AGL1        ------>NtERF2<---------ZAT18
                 =====================HOX2a_HOX2a                <---------LBD16
                 <---------YAB1=====================HOX2a_HOX2a <---------LBD16<---------ZAT14
          <---------YAB1      --------->GLK1(1)  >>>>>>>>>TBF1------->GAMYB    --------->ZAT18
     --------->LBD16<---------WOX13(1)----------->RAV1(1)    --------->MYB46(3)--------->ZAT14     -
 
actacttccgaagatgattcctgattgtctctgatctcttccaacataggaagaagaagcgacaatcgccgggagaggttagcgcagtgcttcttcatcg  12377600
        ----------->GT1
     --------->ARR14(2)
     <---------ARR14(2)
     <---------GLK1(2)
   ------->GAMYB
  --------->ANAC58
  <---------ANAC55(2)
  --------->ANAC55(2)
  --------->ANAC58      ------>ZmHOX2a(2)
 <-----------------AGL1<------ZmHOX2a(2)            <---------At4g35610                           <-
--------->MYB52(1)    --------->ARR11(3)    <---------TOE1(3)                                   <---
---------->HVH21---------->DOF2             <---------TOE2(3)                 --------------->AGL15
 
gtgtaacggaatcggaaattgaagcgatctcgtttattgaatcgattaaggtttgagctaatttgtgtttctctgatttcgccattttttgtattggttt  12377700
            --------->ZAT18
      <----------CDC5
    --------->ANAC46                                                            --------->REM1(1)
    --------->ANAC58    <---------HSFB2a(2)                 *TSS           --------->ANAC58
    --------->ANAC58 <---------YAB1                <---------O2            --------->ANAC58
-----ZmHOX2a(1)   <---------MYB52(1)               --------->O2          ---------->DOF2 --------->REM1(2)
------TOE2(3)   ----------->GT1                <-----------HVH21 <-----------RAV1(2)  <---------ANAC46
 
aggaaacacgcagagggaactgttattctagtaatcagttttttttttttggtcacgaggtttttgactcaggcatgaaagctacaactgtgtgaagacg  12377800
                                                                                             <------
                                                 --------->MYB59                          --------->ETT(1)
                                               <---------MYB52(1)                    <---------ANAC58
                                             <---------MYB46(3)      <---------YAB1  <---------ANAC58
                           --------->YAB1   ------>ZmHOX2a(2)    --------->TOE2(3)   <---------ANAC46
                      --------->ICU4       <------ZmHOX2a(2)  ----------->RAV1(1)   <---------LBD16<
                    --------->YAB1        <---------ARR14(2)--------->At4g35610 <---------ICU4    <-
     <------ZmHOX2a(1)<---------YAB1      --------->ARR14(2)<---------At4g35610--------->ICU4-------
 
aagacgaaggagtcatggattagtcatgagtcataaaccggctcagatcggttaggctaagtcagcaacattatcaattgcgataatttcgggtcggatt  12377900
                                                                                            --------
                                           --------->WRKY18(1)                              <-------
                                          <-----------HVH21                                ---------
 <-------GAMYB                        <---------At4g35610                    --------->WRKY18(1)
--------->MYB55(2)                  <---------WRKY38(1)                     <-----------HVH21    ---
--------->MYB111(2)         --------->AHL20(1)                             ----------->GT1 ---------
<---------MYB46(3)     --------->AHL20(2)----------->GT1                <---------At4g35610---------
---ARR14(2)        ---------->DOF2  <---------WRKY12                  <---------WRKY12     =========
--------P<---------AHL20(2) <---------AHL20(2)                        <---------ZAT14 <---------ICU4
------GAMYB      ------->GAMYB     <<<<<<<<<WRKY6 --------->ANAC58    --------->ZAT18--------->AHL20(2)
-->ARR14(2)<-----------GT1  --------->AHL20(2)    --------->ANAC58    <---------WRKY38(1)  ---------
 
gggttgttgtattttttcaacccaaagaaaataaaatagtcaactggtcaaacaagaaataccaaaaaatgagtcaactggtcaaacaataaataccaaa  12378000
   <-----------------AG
 <----------ID1
------->AGL15            <---------MYB46(3)
--------AGL15           <---------YAB1
-------->AGL2    <---------AHL20(2)
------->DOF2     --------->AHL20(1)
-------->AGL3    --------->AHL20(2)        ----------->GT1
-------->AGL1   --------->AHL20(2)         <---------MYB46(3)
=====================MADS_MADS          <---------ANAC46             ----------->GT1             <--
-------->AG----------->GT1 <---------WOX13(1)                   ---------->DOF2           <---------At4g35610
 
aaaagaaacaaatttggaaaaaaattggtgattgtttttagttaagtggttaatgccagactaatcccaaagaagaaaaaaaaacagtattttagcttag  12378100
                                   ---------->DOF2
                                <---------ANAC46
                               <---------TOE2(3)
                               <---------TOE1(3)
                              <-----------GT1
                             <-----------GT1
                            <---------AHL20(2)        ----------->GT1                        <------
                       <---------AHL20(2)          <---------AtLEC2                        <--------
                       --------->AHL20(2)--------->ANAC58                                  ---------
-------AHL20(2)     <---------GLK1(2)    --------->ANAC58                          ------->TEIL
 
tttatttgtgtttgaaacattcagattttattttaacgtatagcaagctaatttgtatggtatatttcaaatatttggactatatgaacatggagattca  12378200
                             <---------AHL20(2)
        <----------DOF2  <---------AHL20(2)
    <---------CCA1(2)   <---------ARR11(3)                        <---------ANAC58
-TEIL------->TEIL       --------->AHL20(1)                   <----------DOF2
-ARR14(2)               <---------AHL20(1)  --------->YAB1 <----------DOF2
>ARR14(2)   <-----------RAV1(1)<-----------GT1 <-----------GT1    <---------ANAC58                 -
 
caactatgtatctttgtgttgctactatatatttatacgagtttagataataacatgttttgctctttggcttactcaattctcagagataatttgagaa  12378300
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AGI:  At2g28830.1   
Description:  armadillo/beta-catenin repeat family protein / U-box domain-containing protein. similar to armadillo/beta-catenin repeat family protein / U-box domain-containing family protein [Arabidopsis thaliana] (TAIR:AT3G46510.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21678.1); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Armadillo (InterPro:IPR000225); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989); contains InterPro domain U box; (InterPro:IPR003613)
Range:  from: 12375299    to: 12377761    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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