Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                            --------->ICU4                                    --------->YAB1                                 --------->YAB1                                <---------YAB1       --------->ANAC58       --------------->AGL15                      <-----------GT1       --------->ANAC58       <---------------AGL15          <---------------AtSPL8      ------>NtERF2           --------->YAB1----------->GT1  --------------->AtSPL8                 <     --------->RAP2.6(2)      --------->TOE2(3)              --------->DAG2 --------->TOE1(3)       - --------->DOF2              ----------------->AGL3         ---------->DOF2 --------->TOE2(3)      <- >DOF2--------->LBD16        ----------------->AGL2--------->AHL20(2) --------->YAB1               --   tgtaaagccgcgaaatattggccagtttagaaccataataagaaattagtaaataaaacataaaaagtactatattaaccttgaaaatttgttacacagt  12138200                                              --------->AHL20(2)    <---------ARR11(3)                                              <---------AHL20(2)    --------->ARR11(3)                                          --------->AHL20(2)        --------->GLK1(2)                <---------YAB1            <---------AHL20(2)  <---------AHL20(2)             <---------YAB1              --------->AHL20(2)   --------->AHL20(2)          <---------YAB1                 <---------AHL20(2)--------->YAB1              --------->ATHB12    <---------AHL20(2)               --------->AHL20(2)   --------->ICU4          <---------YAB1    --------->AHL20(2)               <---------YAB1       <---------YAB1          ----------->HVH21 ---------AHL20(2)                   <---------AHL20(2)  <---------AHL20(2)     --------->CCA1(2) -------->AHL20(2)           <---------ARR11(3)         --------->YAB1         --------->ARR14(2) --------AHL20(2)            --------->ARR11(3)     <---------YAB1 --------->RVE1(1) <---------WOX13(1) ------->AHL20(2)   --------->AHL20(2)  <---------YAB1 <---------YAB1          <---------ARR14(2) ---   attaatttaaatttgattatacttaaatagacatcttatattattaatttaaatttgattataattaaaaaatctatagcagatatgactgatttgacaa  12138300                           <------MYB46(1)                           <------MYB83                          --------->MYB111(2)                          --------->MYB59                          --------->MYB46(2)                          <---------MYB46(3)                          <---------------AtSPL3                          <---------------AtSPL8                          --------->MYB111(1)                         <--------P                         <---------MYB55(1)                        <-------GAMYB                       <------MYB83                    <---------MYB52(1)                  <---------ANAC58   --------->AHL20(2)  <---------MYB46(3)   <---------AHL20(2)  <------MYB46(1)               --------->AHL20(2)   --------->AHL20(1) <---------AtMYB61    --------->YAB1 ------>AHL20(2)  <---------ANAC58       <-----------GT1  <-----------GT1        ---------->DOF2    -   aaaaataaaatgcaatattgtcgtttggttggtacagaaattttttcatcacaaattatatcacattttggagtttaacaaaaaaaagcatgctaaattg  12138400                                                           <---------AHL20(2)                                                <---------ICU4                                                <---------------AtSPL8                                            <---------AHL20(2)          <----------ID1                                            --------->AHL20(2)          ----------->GT1                                           --------->AHL20(1)        --------->DAG2          --------->YAB1       --------->YAB1   --------------->AtSPL8 ----------->GT1 --------->AHL20(2)     <---------AHL20(2)     --------->YAB1 <---------AHL20(2)       ---------->DOF2  --------->AHL20(2)     --------->AHL20(2)    ----------->GT1 <---------AHL20(1)  ----------->GT1   --------->AHL20(2) -------->REM1(1)  <---------ZAT6          --------->AHL20(2) <---------TOE2(3) --------->AHL20(2)   ctacaatataaatcatagttagtgataaactgataatatttgaaataaaattagtacccatattaatgtaaaaagggaaaaaataaaaaatatatgtggt  12138500                         <---------TOE2(3)                        ---------->DOF2                                         <-------GAMYB                      <---------AHL20(2)                                       <---------MYB46(3)                 --------->ARR11(3)                                            ----------->GT1                 <---------AHL20(1)                                         <------MYB83                 <---------ARR11(3)                                         <------MYB46(1)                 --------->AHL20(1)                                       <---------WOX13(1)                --------->CCA1(2)                                        <------------CBF               --------->ARR11(3)     <------ZmHOX2a(1)         --------->AHL20(2)     <-----------GT1               <---------ARR11(3)   <---------TOE2(3)       ---------->DOF2<---------AtMYB61           ---------->DOF2    <---------YAB1    --------->AHL20(2)      --------->ATHB12           --   attgtttcttaaaaaaagatatattttaaagtataatttaggaaaccaaaaaaaatgtgaacaaaagaaaatatagattggtggttatatttccccttaa  12138600                                                                                          <<<<<<<<<TBF1                                                                                <---------ALFIN1      <---------WOX13(1)       *TSS                                             --------->ANAC46     <------------CBF        ----------->GT1    --------->ANAC58              <---------ALFIN1   --------->AHL20(2)<------MYB46(1)            --------->ANAC58            --------->ANAC58   <---------AHL20(2)<------MYB83            --------->WRKY18(1)            --------->ANAC58 <<<<<<<< --------->GT1       ----------->GT1   <----------DOF2        <----------DOF2--------->MYB46(3)   gaagtttaattgacctctaaatttggtttaatggttaatctcttttcgtcaagctatattcttccttttgatcaaaacacccacacctcttcttcttctt  12138700                                      <<<<<<<<<TBF1                                   <<<<<<<<<TBF1                                <<<<<<<<<TBF1                     --------->TOE2(3)                          <------ZmHOX2a(2)                  <---------GLK1(2)                    <--                         --------->ARR14(3)                  --------->ARR11(3)                 <----                         <---------ARR14(3)                  <---------ARR14(2)      <---------ZAT2                         <---------ARR11(3)                  --------->ARR14(2)      --------->ZAT2                         --------->ARR11(3)                 <------ZmHOX2a(1)       --------->ANAC58            <-----------GT1------>ZmHOX2a(2)              <---------TOE2(3)         --------->ANAC58      --------->TOE2(3)  --------->ARR14(2)            <---------ANAC58         --------->ANAC46----- <TBF1--------->TOE1(3)  <---------ARR14(2)            <---------ANAC58     ------>ZmHOX2a(1) <------   cgcataaaccttaaaaaccatttccacgatcttcttcttcttcttccctcaaatatagcttaggattttcttaatttcctctacccaagctccatggctg  12138800                                                                                         <----------DOF2                                                                              ------>ZmHOX2a(2)                                                                             <---------GLK1(1)                                                                            --------->ARR11(3)            ------>ZmHOX2a(1)             ------>MYB83                      --------->ARR14(2)     <---------ARR11(3)                   ------>MYB46(1)                   <---------AGP1          - --------DOF2                           --------->AtMYB61  <---------ANAC58 <---------ARR14(2)     -- -----At4g35610               <---------TOE2(2)            <---------ANAC58<---------CCA1(2)      <-- ---->At4g35610               <---------TOE1(2)<---------MYB52(1)     --------->ATHB12<-----------GT1 ---RAP2.6(2)                <-----------RAV1(2)      --------->ARR14(2)<---------WOX13(1) <---------   ctttcaatttcttcctctcttcttaattctctcaggtaaacaccaatcccttactcgatctacgtgctcaattgattggatctcgttttctctttacttc  12138900        <---------ARR14(2)        --------->GLK1(2)   --------->TOE2(3)           --------->CCA1(2)        --------->ARR14(2)  --------->TOE2(2)          <---------ARR14(2)    ----------------->AGL3  --------->TOE1(2)        ----------->ARR10   ------>NtERF2      <---------ANAC58              <------NtERF2 -------->LBD16       <---------ANAC58             --------->LBD16 ------->ANAC46       <---------ANAC55(2)         <---------ANAC46 -------LBD16         --------->ANAC55(2)  <---------At4g35610                            <----------DOF2 --GT1  <---------ARR11(1)  --------->TOE1(3)    <---------LBD16  <---------YAB1 ------>ZmHOX2a(1)   tccggagccaaatctagttcaatttcgtaaccttggatttagtttagctatcgcggagatttgattctatgtttgatttagtcctccttgaactttgtac  12139000             ----------->GT1      --------->TOE2(3)                                 --------->CCA1(2)     <---------ICU4                <------MYB46(1)     <---------ARR14(2)     --------->YAB1                ----------->GT1   ----------->ARR10     <--------HAHB4                <------MYB83  <------MYB83     --------->ATHB12        <---------AHL20(2)  <------MYB46(1)    <---------YAB1       ----------->GT1       --------->ALFIN1                            <---------At4g35610    --------->ICU4      <---------TOE2(3)      <--------P                         ----------->GT1   tgagttatcattagattgtataaattgtggtttaatttggtgaatacaggtaggggagatttgagtagtagtagattgttagatttgtaattcagctatt  12139100  Previous    Next  AGI:  At2g28370.1    Description:  Identical to UPF0497 membrane protein At2g28370 [Arabidopsis Thaliana] (GB:Q9SKN3); similar to integral membrane protein, putative [Arabidopsis thaliana] (TAIR:AT2G37200.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21850.1); contains InterPro domain Protein of unknown function DUF588 (InterPro:IPR006702) Range:  from: 12138631    to: 12140781    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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