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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<------
NtERF2
--------->
RAP2.6(2)
--------->
At4g35610
<---------
ZAT2
---------->
DOF2
--------->
ZAT2
---------->
DOF2
<-----------
RAV1(2)
----
ZmHOX2a(2)
--------->
TOE1(3)
--------->
ATERF1(1)
------>
CCA1(2)
--------->
TOE2(3)
--------->
ALFIN1
--------->
MYB52(1)
----->
AGP1
----------->
RAV1(1)
------>
ZmHOX2a(2)
<--------
P
------
ARR11(3)
----------->
GT1
<---------
At4g35610
--------->
ATERF1(1)
----->
ARR11(3)
------>
MYB46(1)
--------->
ARR11(3)
<------
ZmHOX2a(2)
<------
NtERF2
<--
-----
GLK1(1)
------>
MYB83
<---------
ARR11(1)
<---------
ARR14(2)
--------->
LBD16
-------
---->
GLK1(1)
--------->
AtMYB61
<---------
CCA1(2)
--------->
ARR14(2)
<---------
LBD16
-----------
atccaaagagcggcaacaaaacaccaacgttaaaacattcaaatctttgaatgagagccgatccgagtggaggcccagccggggtagccaaaccgataat
12015700
------
------
------>
MYB46(1)
<----------
------>
MYB83
--------->
ARR11(3)
--------->
ANAC58
<---------
ARR11(3)
--------->
ANAC46
--------->
ETT(2)
--------->
ANAC58
--------->
ANAC58
<--------
P
<---------
ETT(2)
---------
GT1
--------->
ANAC58
<---------
LBD16
--------->
AHL20(2)
---------
-->
YAB1
<----------
ID1
--------->
CCA1(2)
--------->
ANAC58
--------->
TOE2(3)
>
GT1
---------->
DOF2
--------->
ARR14(2)
--------->
ANAC58
<----------
DOF2
aaaccagccatatgttgagaattgaaagaaattaagccaaaacatgtaaacaaaatatgcggtagccataaccaagtaaatgtagacatctttaaccagc
12015800
----------->
HVH21
<---------
ETT(2)
<--
>
MYB83
--------->
GLK1(2)
<---------
REM1(1)
-----------
>
MYB46(1)
<---------
WOX13(1)
<---------
SPL7
------->
MYC3
-
GT1
<-----------
RAV1(1)
--------->
TOE2(3)
--------->
SPL7
<-------
MYC3
>
MYB46(3)
--------->
At4g35610
<---------
WRKY18(1)
--------->
YAB1
----
ctgccttctggtgtctgcttgataatccataacatgaccggccatacgatgtagaccaagaagcctataaccaaaacgataacaataccatgtggtaaac
12015900
--------->
LBD16
<---------
ANAC46
<---------
LBD16
--------->
PCF5
<-----------
HVH21
---------->
DOF2
<------
NtERF2
<----------
DOF2
<---------
HSFB2a(2)
------>
NtERF2
<---------------
AGL15
----------->
RAV1(1)
<--
------>
ZmHOX2a(1)
--------->
LBD16
--------->
ANAC46
-----
--------------->
AGL15
<---------
DEAR3(1)
<----
---------->
ID1
--------->
HSFB2a(1)
<---------
ICU4
--------->
At4g35610
-----
--------
DOF2
<---------
HSFB2a(1)
--------->
ICU4
<---------
LBD16
<-----
>
GT1
<-----------------
AGL3
<---------
YAB1
<---------
At5g28300
<---------
LBD16
----->
TOE2(3)
--------->
MYB52(1)
--------->
YAB1
----------->
HVH21
----------------->
AGL1
ctttttgtccttttaaaagaacggtcccggagaccattataaagattactaagtcagtgaccgcggcacaagactgaaccattcgtccaaactcggaatg
12016000
<------
ZmHOX2a(2)
<---------
ARR11(3)
--------->
ARR11(3)
--------->
AGP1
<---------
MYB52(1)
--------->
ARR14(2)
<-----------
HVH21
<---------
ARR14(2)
--------->
YAB1
--------->
LBD16
<-----------
TGA1
------>
ZmHOX2a(2)
--------->
YAB1
------>
ZmHOX2a(1)
--------->
ATHB12
<---------
ARR11(3)
--------->
ICU4
--------->
GLK1(1)
--------->
LBD16
--------->
ARR11(3)
<---------
ATHB12
<---------
GLK1(1)
<---------
ANAC58
------
P
<---------
GLK1(1)
--------->
ANAC58
<---------
YAB1
<---------
ANAC58
---->
ATHB12
--------->
ANAC46
--------->
AHL20(2)
--------->
ANAC55(2)
-----
MYB46(3)
--------->
AtLEC2
<---------
YAB1
--------->
YAB1
<---------
ANAC55(2)
------>
GT1
------>
ZmHOX2a(2)
--------->
ANAC46
<---------
ATHB12
<---------
ARR14(2)
----
AtMYB61
<-----------
HVH21
--------->
ANAC58
<---------
ATHB51
--------->
ARR14(2)
gttgatcttgagatctgtcaagagtccattcacaccagcaaatgatgataaactttgcaataatatgatttcctggtattgaagttccgtcat
tgccaac
12016100
<---------------
AGL15
<-----------
TBP
----------------->
AGL3
--------->
GLK1(1)
--------->
ANAC58
<-----------
TBP
--------->
ANAC58
<---------
ICU4
<---------
ARR14(2)
------->
TEIL
<------
MYB83
--------->
ICU4
--------->
LBD16
------------>
CBF
---------->
DOF2
--------->
MYB59
<---------
YAB1
<---------
LBD16
<---------
WRKY18(1)
--------->
AHL20(2)
<------
MYB46(1)
------>
ZmHOX2a(1)
--------->
ARR14(2)
<------------
CBF
<---------
MYB52(1)
------>
ZmHOX2a(1)
<-----------
GT1
----------->
HVH21
------------>
CBF
<---------
DEAR3(2)
ttcccaaaatgtttcctagtcctcattagaatgtaaccggatatatatgggatgaccaatgtattgaacccaattaaagcagccctcggttcggtttttc
12016200
-----
------
------
------
<-----------
HVH21
<-----
--------->
LBD16
<------
<---------
LBD16
-------
<------
ZmHOX2a(1)
--------->
LBD16
<------
<---------
TOE1(3)
<---------
ALFIN1
<-------
<---------
TOE2(3)
--------->
DEAR3(1)
--------
<----------
DOF2
--------->
ANAC58
<---------
--------->
ANAC58
--------->
ANAC58
<---------
SPL7
--------->
ANAC58
------->
TEIL
--------->
ANAC46
<---------
ETT(2)
--------->
ANAC46
<---------
ZAT18
--------->
ETT(2)
XXXXXXXXXXXXXXXXXXXX>
MIR861-3P
--------->
ZAT18
<------
NtERF2
<-----------
HVH21
taagcatcccaacgtctatagacacgcctttaaggaaccagtacattacaaacccgaatgcacccccggtctcggcaacctttggcctcccgtcgtccgg
12016300
--------->
TOE1(2)
--------->
TOE2(2)
---->
LBD16
----->
GT1
------------>
CBF
--------->
ANAC58
--->
HSFB2a(2)
--------->
ANAC58
--------->
ANAC58
--->
LBD16
--------->
ANAC58
--------->
ANAC55(1)
----
HSFB2a(2)
<---------
ALFIN1
--------->
ANAC55(2)
---
LBD16
--------->
ANAC58
--------->
ANAC46
-->
HSFB2a(2)
<---------
ANAC46
--------->
ANAC46
<---------
ANAC55(2)
---
HSFB2a(2)
----------->
RAV1(2)
--------->
ANAC58
<-----------
GT1
--
LBD16
---------->
DOF2
<---------
REM1(1)
--------->
ANAC46
<---------
YAB1
->
SPL7
---------->
DOF2
<---------
ANAC58
<-------
TEIL
--------->
ANAC46
<------------
CBF
--
HVH21
--------->
At4g35610
<---------
ANAC58
<--------
P
<---------
ALFIN1
------------>
CBF
---------
gaaaaacatccgatgaagcaaagagcctggcctggtgtaagaaaacaggttgatgaccacacaccccttcagcaatacaattgttttcacgtaatcaaaa
12016400
<---------
ARR11(3)
----------->
GT1
----------->
GT1
<---------
ANAC58
<---------
AtLEC2
<----------
DOF2
--------->
ATHB12
<---------
ANAC58
--------->
GLK1(2)
<----------
ID1
--------->
YAB1
<---------
ANAC58
--------->
ARR11(3)
<---------------
AtSPL8
<-
<-------
TEIL
<---------
ANAC46
--------->
YAB1
--------->
DAG2
<------
>
YAB1
<---------
ANAC58
<---------
YAB1
---------->
DOF2
<----------
DOF2
tcacattcattgtttgttttgcgtttgcatggtgtaatatgatattctttttgccaaaaaaaaaaaaaaaaagcacaaactaaatgagaaacttttacaa
12016500
<---------
AHL20(2)
--------->
AHL20(2)
--------->
AHL20(2)
--------->
AHL20(1)
---
<---------
AHL20(1)
<--
--------->
AHL20(2)
-----
<---------
AHL20(2)
<----
<---------
YAB1
-------
--------->
ATHB51
<------
<--------
HAHB4
<--------
<---------
AHL20(2)
---------
-------->
ATHB1
--------->
AHL20(2)
<---------
AHL20(2)
--------->
YAB1
<---------
AHL20(2)
--------->
AHL20(2)
-------->
HAHB4
<xxxxxxxxxxx
--------->
AHL20(2)
--------->
ICU4
<---------
AHL20(2)
<---------
ANAC58
<---------
ATHB51
--------->
AHL20(2)
<---------
ANAC58
----------->
GT1
<---------
AHL20(2)
-
--------->
YAB1
<---------
AHL20(2)
<---------
AtLEC2
<---------
TOE2(3)
--------->
AHL20(2)
<
----------
GT1
<---------
ANAC46
<---------
YAB1
--------->
LBD16
<---------
ICU4
<---------
AHL20(2)
---
YAB1
--------->
AHL20(2)
----------->
GT1
---------->
DOF2
<---------
YAB1
--------->
AHL20(2)
ttatccaaatataaaatgcttgtaatttaaaaatgtgaaattttgaatgaacaaaaatgcgcaaaatgaggtaattattaatatatatatatatatatat
12016600
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AGI:
At2g28170.1
Description:
ATCHX7 (cation/hydrogen exchanger 7); monovalent cation:proton antiporter. similar to ATCHX6a (CATION/H+ EXCHANGER 6A), monovalent cation:proton antiporter [Arabidopsis thaliana] (TAIR:AT1G08140.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21363.1); contains InterPro domain Sodium/hydrogen exchanger; (InterPro:IPR006153)
Range:
from: 12013448
to: 12016093
Orientation: Reverse
Links:
TAIR
MIPS
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publications
when using AthaMap.
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