Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      -                                                                                                  ---                                                                                                  ---                                                                                                  ---                                                                                                 ----                                                                                                <----                                                                                                <----                                                                                                <----      <---------MYB52(1)                                    <----------DOF2                     <---- ------ARR11(3)                                         <----------DOF2                         <---- ----->ARR11(3)                                      <---------AHL20(1)                        ------ -----CCA1(2)                                        --------->ARR11(3)                        ------ -AHL20(2)                  --------->AtLEC2         <---------ARR11(3)                        ------ >AHL20(2)      <---------MYB52(1)             ----------->GT1                                 ------   atctatctgttattctcagttttgttcttcatgaaaactcaattgcatattgtaatatctttcttttttttgttttctgttttgccttcaacttcacacc  11829400        <-----------GT1      <---------AHL20(2) <---------AHL20(1) -------->YAB1                                    <---------ARR11(1) --->MYB83                                        <-----------ARR10 --->MYB46(1)                                     --------->ARR14(2) ------>MYB52(1)                                  <---------ARR14(2) ----->MYB55(1)                                   ------->TEIL -----MYB59                                      <---------ARR14(1) -----MYB111(2)                                  <---------CCA1(2) -----MYB46(2)                                 <---------ANAC55(2) -----MYB52(2)                                 --------->ANAC46                  <---------ATHB12 -----MYB111(1)                                --------->ANAC55(2)              ------>MYB83<-------- --->ANAC58                                    --------->ANAC55(1)              ------>MYB46(1) --->ANAC46                              <<<<<<<<<GATA-1        <---------AHL20(2)    --------->YAB1 --->ANAC55(1)                       <---------DAG2      ---------->ID1       <---------MYB59 --->ANAC58                          <----------DOF2 <----------DOF2        ------------------------>ANAC81   taacatattttttctaaatctaatccatacatttccctactttatctatacgtatctttgtcttatttatagattgagaaccaaacaatgagaataacat  11829500                       ------>MYB46(1)                                               --------->PCF2                       ------>MYB83                                            <----------DOF2                  --------->ANAC46                                          <---------ARR11(3)             <---------YAB1                                                 --------->ARR11(3)    -------->P--------->YAB1--------->ANAC58                           -------->P    <--------------- --------->At4g35610 --------->AtMYB61                                 ------>MYB83<-----------GT1 <---------At4g35610 --------->MYB46(3)    <-----------GT1             ------>MYB46(1)              < ---GT1    --------->YAB1   --------->ANAC58      --------->AHL20(2) --------->TOE1(2)  <---------ALFIN1   tttagctacctatttataatacaccaactcaagaaaattgttgtattaccaattcaatataaacatgttaacctacaagaccttttagccccacttggta  11829600                                          <---------AHL20(1)                                          --------->ARR11(3)                                          --------->AHL20(1)                                          --------->AHL20(2)                                --------->MYB46(3)                               ------->TEIL                   ---------->ID1         <---------ARR11(3)                   <-----------GT1 ------>MYB46(1) --AG <-----------GT1 <----------DOF2     <---------AHL20(2)     <---------YAB1 ----------DOF2   <-----------GT1  ------>MYB83   --------->AtLEC2           <-----------GT1   ttctttttttactatatgtttttcctttctatgaaccaacttaatatatttcatacaaaattagtttctgattcaaattttgccctactaagtctctaaa  11829700                                  <---------WRKY18(1)                                 --------->WRKY38(1)                                 --------->WRKY12                               <-------GAMYB                              <---------MYB46(3)        <---------YAB1                             <---------AtMYB61       ---------->ID1           --------->ATHB12              <---------AHL20(2)<---------WOX13(1)   <---------YAB1          <---------YAB1          <---------YAB1     --------->ALFIN1 <----------DOF2    ----------->GT1   taagtttagaatatgtttaatcagggatagtgtggttgactgagagggcatttttgtcattatacatcggtaacaagtcttgataggctcttaaggccag  11829800                                                                    ===============================HOX2a_HOX2a                                                                    <------ZmHOX2a(1)               -                                                              =============HOX2a_HOX2a             --                                                              --------->At4g35610            ------>ZmHOX2a(2)                                                              <------ZmHOX2a(2)             <------ZmHOX2a(2)                                                             <---------ARR14(2)            --------->ARR14(2)                                                             <---------ARR11(3)            --------->ARR14(3)                                                             --------->ARR11(3)            <---------ARR11(3)                            <-----------RAV1(1)              --------->ARR14(2)            --------->AGP1                   --------->GLK1(1)                         <---------AGP1                <---------ARR14(3)                   --------->At4g35610                       --------->GLK1(2)             --------->ARR11(3)                   <---------At4g35610                       <-----------ARR10             <---------AGP1              --------->ANAC58                  =====================HOX2a_HOX2a           <---------ARR14(2)              --------->ANAC58                  <------ZmHOX2a(1)   ================================HOX2a_HOX2a          <-----------GT1<----------DOF2        ======================HOX2a_HOX2a    --------->ANAC58         *TSS --------->ANAC46  <---------At4g35610         <------ZmHOX2a(1)        --------->ANAC58     <-----------TBP    <---------DAG2        <---------TOE2(3)------>ZmHOX2a(2)--------->ANAC58   --  ----------->GT1  <---------GLK1(1) ----------->GT1    ---------->DOF2         --------->ANAC58   <-   tcttgggttatataacaaggcatctcccttttggtgctcatgtaaattgaggaagagaaaaaggatctgaggaacaatggctacgacaagacagatcttg  11829900                 <---------AHL20(2)          ------->GAMYB    --------->RAP2.6(2)                      --------->TOE2(3)                ---------->DOF2    ----------->RAV1(1)               <---------LBD16               --------->ATHB12 --------->RAP2.3(3)                 <---------LBD16               <---------ATHB12 -------->ATERF1(1)              --------->ARR11(3)  --------->ATHB12 <---------WOX13(1)   <--------- ------->At4g35610               <---------ARR11(3) <---------YAB1 <---------YAB1        --------->At4g35610 ------->ZAT2   --------->AHL20(2)--------->ZAT2  <---------AtLEC2<---------TOE1(2)    <------ZmHOX2a(1) --------At4g35610         ------->TEIL--------->LBD16           ------>ZmHOX2a(1)   --------->ALFIN1   gagcagccacaatcgccatttattcaacgtatcaagagctcggggaacattagcatgaatggcagtcctatgattgatgagaaagaagaggagctttcac  11830000                                                                        --------->LBD16                                                                       --------->HSFB2a(2)                                                                  <---------------AtSPL8          <--                                                               <---------ARR14(2)                 ---                  <---------TOE1(3)                           <------ZmHOX2a(1)                   <--                  <---------TOE2(3)                         <---------TOE2(3)                    ----          <----------DOF2                     <------ZmHOX2a(1)--------->ARR14(2)                ----         <---------ANAC58    --------->At4g35610       <---------MYB46(3)   ---------->DOF2    <-----    <----------DOF2   ---------->DOF2      <------ZmHOX2a(1)<---------TOE1(3)--------->DAG2  <------- -DOF2   <---------ANAC58    <---------At4g35610      <---------TOE2(3)<---------HSFB2a(2)<----------CDC5   agtctgcttttgctttgtttaaggcaaaggaagatgagattgagaggaggaagatggaggttaaggatagggtccagaaaaagcttggactcgctgagga  11830100                       <---------HSFB2a(2)                     <-------TEIL   <------MYB83                    --------->ARR14(1)   --------->HSFB2a(2) --------->HSFB2a(2)   <---------HSFB2a(2)<---------LBD16                                   <---------YAB1 -------At4g35610   --------->CCA1(2)                                  <-----------GT1 ------>HSFC1(2)    --------->GLK1(2)                               <---------ARR11(3) -------HSFC1(2)   <---------ARR14(2)      <-----------GT1          --------->ARR11(3) ----->ANAC58      --------->ARR14(2)   ----------->GT1             <---------GLK1(2) ----->ANAC58      --------->ARR11(1) <---------ANAC46            ----------->ARR10          -------- -ZmHOX2a(1)       <---------GLK1(2)<------MYB46(1)    <---------ARR11(3)                   <-------- --TOE2(3)       ----------->ARR10 --------->MYB59     --------->ARR11(3)                <---------AtMYB61   agctactagaagattagccgagattcgggaagtaagtttggtttgtaacattttcaagaacttgaacaaagattttcattttgagagagttttggtttgt  11830200                                                           ---------->DOF2                                                         <------ZmHOX2a(1)                                                        <----------ID1                                                 --------->LBD16                                             --------->ARR14(2)                                 --------->YAB1<---------LBD16                                <---------ATHB12--------->ANAC46                           <------ZmHOX2a(2)--------->GLK1(1)                 <---------ARR11(3)        <---------ARR11(3)       ===========================HOX2a_HOX2a<---------ARR14(2)       <------ZmHOX2a(1)   =====================================HOX2a_HOX2a              --------->ANAC58    <---------LBD16       <---------ARR14(2)--------->CCA1(2)                            --------->ANAC58    <-----------RAV1(2)   --------->ARR14(2)<---------GLK1(1)                  ------->GAMYB <------- ------->AtSPL8  --------->ARR11(3)        --------->ARR11(3)                <---------At5g28300 -ANAC46         <-----------ARR10   ---------->DOF2   <---------TOE2(3)    --------->MYB52(1)    <--   acattttcaggagcttgaagctcttaccgatccaatgagaaaagagatatccgcgataaggaaaagagtcgatgctattaaccgagaactcaagccttta  11830300  Previous    Next  AGI:  At2g27740.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G36410.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO16676.1); contains InterPro domain Protein of unknown function DUF662 (InterPro:IPR007033) Range:  from: 11829809    to: 11830809    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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