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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                             <---------LBD16
                                                     <-----------TGA1                            <--
                                                    --------->ANAC55(2)                         ----
                                                    <---------O2                                <---
                                                    <---------TGA1a                            <----
                                                    --------->O2                               <----
                                                    --------->TGA1a                            -----
          <---------ALFIN1                          --------->TGA2(1)                         ------
     ------>ZmHOX2a(2)                <---------ANAC58     --------->GLK1(2)                  ------
    <------ZmHOX2a(2)                 <---------ANAC46   --------->ICU4         <---------GLK1(2)---
   --------->ARR14(3)                 <---------ANAC58--------->TGA2(2)        <---------At4g35610 -
   <---------ARR11(3)                 --------------------->WRI1               <---------ZAT2-------
   <---------ARR14(2)            <---------HSFC1(2) <---------bZIP60(1)    ----------->RAV1(1)------
   <-----------ARR10             --------->HSFB2a(1)--------->bZIP60(1)    =========================
   <---------ARR14(3)            --------->HSFC1(2) <---------TGA2(1)      ------>NtERF2    --------
   --------->ARR14(2)         ================================bZIP_DOF    ----------->HVH21 --------
   --------->ARR11(3)         ---------->DOF2      <-----------STF1       <---------ETT(1)  <-------
   <---------GLK1(2)       --------->ANAC58        ----------->STF1  --------->HSFB2a(1)   ---------
 ----------->ARR10         --------->ANAC58       <---------TGA2(2)  <---------ALFIN1    <----------
-----MYB46(3)            <---------ANAC58        ----------->TGA1    --------->ZAT6  <<<<<<<<<TBF1<-
>ALFIN1------>ZmHOX2a(1) <---------ANAC58    <---------ARR14(2)--------->LBD16 --------->At4g35610--
 
gatgaagatcctcgcactctctgagaatgcgagcaaagcttccttgtgaatactgacgtcataatccggcgaacactccgacagcttcttcttcaccacc  11753400
------>NtERF2
<---------ZAT18
--------->ZAT18
-------ATERF1(1)
----->ANAC46
------DEAR3(1)
-----LBD16
-----MYB55(2)                                                                         <---------DAG2
---->MYB46(3)                                                                         <----------DOF2
>MYB83                                                                             ------>NtERF2
>MYB46(1)                                                                          --------->LBD16
------>LBD16                                                                      --------->ANAC46
-------->DEAR3(1)           <---------ALFIN1                                     <---------LBD16
-->ABI4(1)        --------->At4g35610                                     ------>NtERF2<---------MYB52(1)
----->RAV1(2)     <---------ZAT2                                         --------->DEAR3(1)
======RAV         <------NtERF2                                         <------NtERF2<----------DOF2
->AtMYB61         --------->ZAT2  <----------DOF2                       --------->ATERF1(1)
->DEAR3(1)     <------NtERF2--------->DEAR3(1)                          --------->DEAR4(2)       ---
--ALFIN1--------->STY1(2)   --------->AtMYB61                           --------->RAP2.3(1)---------
>MYB46(3)   --------->At4g35610   <---------DAG2                       <---------RAP2.3(1) ---------
-GT1    <---------STY1(2)  --------->MYB46(3)                          <---------ATERF1(1)<---------YAB1
-----NtERF2--------->MYB52(1)  <---------ALFIN1                       <---------DEAR3(1)*TSS     ---
------->RAP2.3(1) <---------At4g35610    ------>NtERF2     ------>ZmHOX2a(1) <----------DOF2  ------
 
cggcgcacaatagctagcggcagctcgtccaccaccactttctccgactccattcttctctcctctctctcagtcgccgtctttcccgcctttatgttaa  11753500
                                                                                                 ---
                                                                                                 ---
                                                  ---------->DOF2                                <--
                                           <---------AHL20(1)                                   ----
                                           --------->AHL20(1)                                 ------
 <----------ID1                            <---------AHL20(2)                                -------
------>YAB1              --------->At4g35610    <---------AHL20(2)                           -------
>TOE2(3)                 <---------ZAT2 <---------AHL20(2)                                   -------
>YAB1                    <---------At4g35610--------->AHL20(2)                ---------->DOF2-------
----->HAHB4            <---------ZAT14  --------->AHL20(2)              --------->ANAC58     -------
--->YAB1               --------->ZAT14 --------->YAB1                   --------->ANAC58   <--------
 
taatacaacaaaacacatcggcccagtaagctgatcagcctattaaaatatttaaaagcccatattcaagtttataagcactaaagagttatgaccacgc  11753600
   <---------ICU4
--->NtERF2
------>At4g35610
-------At4g35610
----->DEAR3(1)                              --------------->AtSPL3
>NtERF2                                <---------------------WRI1
-->O2 <-----------GT1                 <---------RAP2.6(3)
-->ANAC46                    <---------ARR11(3)                                                <----
-->bZIP60(2)         <---------WOX13(1)<------NtERF2     --------->RAP2.6(3)                 -------
-->ANAC58          --------->ATHB12   <-----------HVH21 <-----------ARR10             ---------->DOF2
-->ANAC58        <---------WOX13(1)  --------->RAP2.6(2)<---------ARR14(2)      --------->ANAC58
-ALFIN1     <---------MYB52(1)   ------>ZmHOX2a(1)      --------->ARR14(2)      --------->ANAC58
 
cgctcaatattacccgttggattgattgacaaaatcctagccgtcaaatcgtactagcaaatcggcccattattcaaattgataagcactaaagagttat  11753700
                                                    --------->YAB1
                                               ------------>CBF --------->AHL20(1)
                                          <---------At5g28300   <---------AHL20(2)
        --------->WOX13(1)          <---------ARR11(3)       --------->YAB1
      ------------>CBF      <----------DOF2  --------->ORA47(1) --------->AHL20(2)
  <-------MYC2             --------->TOE1(3) <-----------HVH21  <---------AHL20(1)
  <-------MYC3             --------->TOE2(3)--------->DEAR3(1) --------->AHL20(2)    --------->YAB1
  ------->MYC2      <---------MYB46(3)   <-----------GT1  --------->YAB1        --------->ANAC58
  ------->MYC3    <---------MYB52(1)--------->ARR11(3)   --------->ZAT6         --------->ANAC58 *TSS
-----YAB1        <-------GAMYB    <---------AHL20(2)----------->GT1      --------->YAB1 <---------GLK1(2)
-->CCA1(2)    <---------At5g28300--------->AHL20(2)<---------ATHB12     <------ZmHOX2a(2)--------->GLK1(2)
 
gagcacgttgtcaatctcaccgttggataacctttattaaatcttcaccgtccaatcgtaatactaataaattcgatcaaaacacgaataagaatcggag  11753800
                                        --------->GLK1(2)
                                       <---------GLK1(2)
                       <---------ARR11(3)
                       --------->ARR11(3)            --------->ANAC46
          --------->HSFB2a(2)          --------->ARR14(2)                        <---------WOX13(1)
          <---------HSFB2a(2)          <---------ARR14(2)                     <---------YAB1      --
         <---------LBD16         <-----------GT1--------->ARR14(2)<---------ICU4 <---------YAB1   --
      --------->MYB46(3)       <---------KAN4(2)<---------ARR14(2)<---------GLK1(2)               --
 
tcgtcttcaacctctggaatttgagacatcttcgaataaccagattctccgaattcgagccatttctaagaatttcatactctgattaatgtcttactca  11753900
                         --------->MYB52(1)
                         -------->P
                  --------->DEAR3(1)
                 <---------LBD16
                 --------->At4g35610
                 <------NtERF2
                 <---------At4g35610
                ------>NtERF2
               <---------ALFIN1
              <---------ABI4(2)                                                                 ----
             <---------ATERF1(1)                                                                ----
             <---------RAP2.3(1)                                                               -----
             ------>NtERF2                                                                     <----
             <---------DEAR3(2)               --------->At4g35610                   --------->WOX13(1)
          <-----------HVH21                  ----------->RAV1(1)                 --------->ARR14(2)
         --------->DEAR3(1)    --------->GLK1(2)                                 <---------ARR11(1)
        --------->DEAR3(2) <---------HSFB2a(2)--------->ZAT2                    --------->GLK1(1)
       ------->TEIL   <---------ZAT2 <---------MYB46(3)                         <---------CCA1(2) --
    --------->ANAC46  <---------At4g35610  --------->At4g35610                --------->ANAC46------
    --------->ANAC58  --------->At4g35610  <---------At4g35610                --------->ANAC55(2) --
    --------->ANAC58  --------->ZAT2 --------->MYB52(2)              <-------TEIL<---------ARR14(2)
 --------->DEAR3(1)--------->LBD16  <---------TOE1(2)              <---------ARR14(2)         ------
------->ANAC58<------NtERF2--------->HSFB2a(2)<---------At4g35610  --------->ARR14(2)         ------
----->GAMYB <---------DEAR3(1)<---------GLK1(2)  --------->At4g35610--------->CCA1(2)  --------->YAB1
------->ANAC58--------->ATERF1(1)  <---------MYB52(1)       ---------->DOF2 <---------ANAC46 -------
 
aacgcctacgcaccgtcggcaccggagctaccagaatcgttcgttcagcagcagcacgatggtgaaagtagatacacttacgcgtatccatcatatcaac  11754000
                                                                                    <---------LBD16
                                                                             --------->ARR14(2)
                                              <---------LBD16               <------NtERF2
                                            --------->ARR14(2)             <---------MYB46(3)
                                            <---------ARR14(2)            <---------ANAC46
                                            ------->TEIL                 <---------At4g35610      --
                                         --------->ANAC58                <---------LBD16          --
----->AtMYB61                            --------->ANAC58                --------->ATERF1(1)      <-
--->GAMYB                             <---------ARR14(2)                 <------NtERF2--------->LBD16
---->MYB46(3)                      --------->ANAC46                     <---------ORA47(2)    <-----
-----MYB55(2)                     --------->LBD16                       <---------RAP2.3(1)   ------
---->MYB83                  ----------------------->TaNAC69(2)         <---------DREB2C(2)   -------
--->ANAC58            --------->LBD16 --------->ARR14(2)               <---------RAP2.3(3)   <------
---->MYB46(1)        <---------LBD16--------->LBD16                    <---------DEAR3(1)<---------At4g35610
--->ANAC58          <---------LBD16--------->LBD16                    --------->ATERF1(1)--------->At4g35610
-->P       --------->At4g35610    <---------LBD16           <------ZmHOX2a(1)<---------ARR14(2)   <-
-->WOX13(1)<---------At4g35610   <---------LBD16--------->LBD16 <----------DOF2    --------->MYB52(1)
 
caactcagcaattcagctcttactccgggatgttttccccggaaacgcatccggagattgtgaggagctttgagtcggcggatagaaaccggagcggatt  11754100
               <---------ETT(1)
              <---------LBD16
           --------->ZAT2
           <---------GLK1(1)
     --------->GLK1(2)                                                     <---------MYB52(1)
    <---------ARR14(2)                                                    <-------GAMYB
------->HSFC1(1)------>NtERF2                                          <---------At4g35610
------->HSFB2a(2)   --------->ANAC58                                 <--------P
--------HSFC1(1)--------->LBD16         --------->SPL7             <------MYB83
----GLK1(1)--------->GLK1(1)      <---------LBD16                  <------MYB46(1)         ---------
--->GLK1(1)<---------ZAT2  ---------->ID1                         --------->MYB59         <---------GLK1(2)
-->ARR14(2)<---------At4g35610<---------MYB52(1)              --------->ATHB12  <---------AHL20(2)--
---ARR14(2)--------->At4g35610--------->DOF5.7(2)--------->ICU4   <---------TOE2(3) <-----------GT1
--------HSFB2a(2)   --------->ANAC58  <---------SPL7  --------->MYB52(1) <-----------RAV1(1)   -----
 
tctcgaagaatcggagctccggcaagcgttgtcgttatctgggtacgatggaattagtaacagaacgattaggttgctgttgtttatttacaagattcct  11754200
       <---------At4g35610
       --------->At4g35610
 --------->GLK1(2)
<---------GLK1(2)                                  <----------DOF2
--------->ARR14(2)                                 <---------DAG2                                  -
<---------ARR14(2)       <-----------GT1          <---------ANAC58           <-----------GT1       <
>GLK1(2)         ----------->GT1      <----------DOF2                     ----------->GT1       <---
--------->ARR10  <------MYB83<---------ICU4       <---------ANAC58      --------->YAB1       -------
->ZmHOX2a(1)     <------MYB46(1)    <---------At4g35610            <---------YAB1  ---------->DOF2 <
 
gtagattctctgcttcggcttggtaaattcacttattgcagcttttgaaattggctttttgatttcaaatatgaatgatgttacaaaatagccatgtttc  11754300
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AGI:  At2g27470.1   
Description:  CCAAT-box binding transcription factor subunit HAP3-related. similar to CCAAT-box binding transcription factor subunit B (NF-YB) (HAP3 ) (AHAP3) family (Hap3b) [Arabidopsis thaliana] (TAIR:AT5G47640.1); similar to unknown [Populus trichocarpa] (GB:ABK94165.1); contains InterPro domain Transcription factor CBF/NF-Y/archaeal histone; (InterPro:IPR003958); contains InterPro domain Histone-fold; (InterPro:IPR009072)
Range:  from: 11752059    to: 11753489    Orientation: Reverse
Links:  TAIR  MIPS 
 
AGI:  At2g27480.1   
Description:  calcium ion binding. similar to calcium-binding EF hand family protein [Arabidopsis thaliana] (TAIR:AT5G04170.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48739.1); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048)
Range:  from: 11753798    to: 11755129    Orientation: Forward
Links:  TAIR  MIPS 
 
 
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