Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                    --------->GLK1(2)                                                           --------->ANAC58                   -------                                                           ----------->GT1                <---------AHL20(2)          --------->AtLEC2                             <-----------GT1                   --------->AHL20(2)       <-------TEIL          <---------AHL20(1)    <---------ARR11(3)                    <---------AHL20(2)    <------ZmHOX2a(1)      >>>>>>>>>MYB98          --------->ARR11(3)             <---------HSFB2a(2) ---------DOF2      <----------DOF2 --------------->AGL15  --------->ANAC58    --------->GLK1(2)   gctttaggattcatgcaaaacgctttagtaacatatttcttcattttgtataagatttaacaagtaaaattctattcaaaaattctagtaattaaatgat  11542300                 --------->At5g28300                ----------->GT1                                                                 <----               --------->ZAT6                                                                   <----             --------->MYB52(1)             --------->TOE2(3)      --------->TOE2(3)           <-----    --------->CCA1(2)    <-------TEIL   <---------AHL20(2)     <---------AHL20(2)              <----- -->ATHB12   <-----------GT1           --------->AHL20(2)--------->YAB1         <------ZmHOX2a(1)   ttatagataggggattaacagtaaaaatacatctaacaatatttaatctaaaatggcaatagtatttaatctaaaatggctaggaatagcatccattgct  11542400        <-----------GT1      --------->HSFB2a(1)      <---------HSFB2a(1)                                                   --------->DAG2      --------->HSFC1(2)          <----------DOF2                          ---------->DOF2      <---------HSFC1(2)     <----------DOF2                          --------->YAB1     <---------KAN4(2)     <---------ICU4                          <--------HAHB4 -----DAG2           --------->ANAC58             <-----------GT1  <---------ICU4 ------DOF2          --------->ANAC58         --------->AHL20(1)   --------->ATHB51         <-------- ----ANAC58          --------->ANAC46         <---------ARR11(3)  <---------YAB1      --------->YAB1 ----ANAC58 ------>ZmHOX2a(1)------>ZmHOX2a(1)<---------AHL20(1)  --------->ICU4     <---------ATHB12   ttttgagaattttcctcttatgcaagtaatcctttcctttctctacaatatttttcattccatagttcataattagaaaaagctccaatgataagggaca  11542500                                                                                             --------                                                                                          --------->ANAC58                                                                                          --------->ANAC58                                                  <---------AHL20(2)                     --------->DAG2                                                  --------->AHL20(2)                    ---------->DOF2                                 <---------ARR11(3)    ---------->DOF2                <------ZmHOX2a(1)                                 --------->ARR11(3)   --------->AHL20(2)          <---------ARR14(2)                              --------->DAG2      <---------AHL20(1)              --------->ARR14(2)                       --------->YAB1             --------->AHL20(1)           <---------ANAC55(2)                     --------->AHL20(1)          <---------ATHB12              <---------ANAC58     --------->ICU4  --------->AHL20(2) <---------AtLEC2    ----------->GT1    <---------ANAC58 ----------->GT1    --------->YAB1  <----------DOF2   <---------AHL20(2)       <---------ANAC46 ----- --ID1   <---------AHL20(2)  ---------->DOF2     --------->AHL20(2)      --------->AHL20(2) <--------   aaatggaatatttatagacaaaaaataatagaaaagttctttgaatggccaataaattaaaggagtaatataaaaaaaaatgcgtataggaaaagcaaca  11542600              <---------ARR11(3)   <---------ANAC58                                                                      --------->ARR11(3)   <---------ANAC46                                                                  <---------AHL20(1)   --------->ALFIN1                                                             ----------->TBP   <---------ANAC58    ------->TEIL                <-------TEIL         <------------CBF <---------ARR11(3) --->RAV1(1)  --------->ARR11(3)                <---------ANAC58       --------->ATHB12 <---------CCA1(2) ----->DOF2  --------->CCA1(1)                  <---------ANAC58   <---------YAB1    --------->AHL20(1) --ID1       --------->RVE1(1)       <---------REM1(1)--------->AtLEC2<---------YAB1--------->AHL20(2)   aagatgtgtgtgaaaaaatctcatgcatttacaatgaagttgaagcattagcgttcatgcaaaaatgttatgctcattggctataaatatatatcttcaa  11542700                                                                                                   <-                                                                                              -------                                                        --------->ICU4                        <------                                                   ----------->GT1                           <-------                                                  ----------->GT1                            --------                                                <---------ANAC46               --------->MYB52(1)----                                              --------->ATHB12                ----------->HVH21  ----                                             ----------->HVH21      <---------MYB52(1)   --------->ARR11(3)                                           --------->CCA1(2)       <-------GAMYB         <---------ARR11(3)                               XXXXXXXXXXXXXXXXXXXX>MIR837-3P     <---------ANAC58      --------->YAB1             ---------->DOF2*TSS      ---------->DOF2   --------->AHL20(2)  --------->ANAC55(2) <----       --------->AHL20(2) --------->MYB46(3) --------->ICU4       <---------ANAC58     <---------YAB1   gaaaacaaaataaacaaaagagagaataacaaacaaacaaaaaagagatgatggggaaatatttatgggcgttagtatatgtaacggtgatgatattaat  11542800                                               <-------TEIL                                              --------->CCA1(2)                              <-------   <---------MYB46(3)                        <---------ARR11(3)                         ------->GAMYB --------YAB1                                --------->ARR11(3)                         --------->YAB1 -->YAB1                                     <---------ARR14(2)                        <---------MYB55(2) ---ICU4                                     --------->ARR14(2)                        <---------ATHB12 --AHL20(2)                                ----------->ARR10                           --------->MYB46(3) ->AHL20(2)                              <------ZmHOX2a(1)                            -------->P ----->YAB1                           <------NtERF2                                   ------>MYB83 ---->HAHB4                         <---------DEAR3(1)  --------->GLK1(1)             ------>MYB46(1) -----YAB1                         <---------LBD16      <---------GLK1(1)<-----------------AGL1   tatagtagttgaagtggaatcaagtcttcatagagtaggcggaggaagatacacttggaactccgatgtcaacttctccgattgggccaaccatcaacgt  11542900                <----------DOF2               <---------ANAC58         ------>NtERF2        --------->DEAR3(1)        ----------->HVH21                                                                        ----      ------>NtERF2                                                                              <---      <---------ATERF1(1)                                                                       <----      --------->LBD16                                                                     <-------MYC3     <---------DEAR3(1)                          <-----------GT1          ------>ZmHOX2a(1)     <----    <---------LBD16   ----------->GT1     <---------MYB52(1)   <----------DOF2   <-----------GT1----- --TOE2(3)     <---------ANAC58     <----------DOF2     <----------DOF2   <----------DOF2 ------->MYC3   ttctactccggcgactggctttgttagtaaaatttcttctttctgttttttttacacactttcttctttgttaatccttttttttactaacacatgtttc  11543000             <---------ANAC58                                               --------->WRKY45             <---------ANAC46             ------>ZmHOX2a(1)                 --------->WRKY12             <---------ANAC58            --------->TOE2(3)                  ----------->HVH21          --------->GLK1(1)              --------->TOE1(3)                  --------->WRKY38(1)          <---------GLK1(1)           --------->ARR14(2)                 <---------ANAC46         <---------ARR14(2)           --------->ARR11(3)                 <---------ANAC58         --------->ARR14(2)           <---------ARR11(3)                 <---------ANAC58 ----------->AGL15                    <---------ARR14(2)          --------->ANAC58 ------------AGL15            <-----------TGA1                    --------->ANAC46 -------------AGL2           --------->ANAC46                     --------->ANAC58 -------------AGL1           --------->bZIP60(2)             --------->TOE1(2)          <---------ANAC55(2) ------------>AG  <-------TEIL<-----------HVH21             --------->At4g35610         --------->ANAC55(2)   taaaatgggcagatttcgggttcaatcgaacgcgtcacaatatccttcaagttaacaagagtagctacgagcaatgcgttgacaacgattacatattcaa  11543100                                                                                                  ---                                                     <---------AHL20(2)                           <--                                                <---------YAB1                             <---------ANAC58                       <-----------GT1      --------->TOE2(3)                              <---------ANAC58           <------ZmHOX2a(1)           ---------->DOF2                                   ------->TEIL        <------ZmHOX2a(1)             --------->AtMYB61                        ---------->DOF2  -----  --------->ZAT6 <---------ARR11(3)  --------->MYB46(3)           <---------TOE2(3) --------->CCA1(2)   cataacacgaggaggacgagatgtttttcaactccttgaaccaaagccttattatttcatttgtggtagaggttattgtctcaaaggtatgaagcttgca  11543200  Previous    Next  AGI:  At2g27035.1    Description:  plastocyanin-like domain-containing protein. similar to plastocyanin-like domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G12880.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15034.1); contains InterPro domain Cupredoxin (InterPro:IPR008972); contains InterPro domain Plastocyanin-like; (InterPro:IPR003245) Range:  from: 11542728    to: 11543563    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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