Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                     <---------ICU4                  <---------AHL20(2)                  --------->AHL20(2)               <---------ICU4            --------------->AtSPL8              --------->ICU4             <---------------AtSPL3       --------->HSFB2a(2)               <---------------AtSPL8       <---------HSFB2a(2)               --------->DAG2       ------>ZmHOX2a(1)                ---------->DOF2                                  <---------MYB46(3) ----->ZmHOX2a(1)<---------YAB1      --------->AHL20(2)                         <---------DAG2   ---- --------MYB59<---------YAB1    --------->At5g28300                  --------->YAB1   <----------DOF2 ------>ID1<---------YAB1      ----------->GT1                    --------->YAB1<----------DOF2------   tcctaactcctagatgattattaattacaaaaacagtaaataaaaagtactactatttctaaattttcttataatgctaaaactttttctttggttaact  11538700         ----------->GT1     --------->DAG2                                                                ------>MYB46(1)    ---------->DOF2                                  <---------MYB52(1)            ------>MYB83 <---------AHL20(2)                              <---------At5g28300               -------->P --------->AHL20(2)                        <----------DOF2                       --------->AtMYB61 ----->AHL20(2)                           --------->TOE2(3)  --------->ZAT6   <-----------GT1      <- --->TOE2(3)                    ---------->DOF2 <-----------GT1  --------->YAB1  <---------MYB111(1)   taattaaaaagtagtttaaaatccatggtaaacacaaagctaaaccttttttaccgttttatatcactagtaatcccattctaccaactcgttgaatact  11538800                      ----------->GT1                    <------ZmHOX2a(2)                   <---------ARR11(3)                   --------->ARR11(3)                                          --------->YAB1                 ----------->ARR10                                   <------NtERF2        --------->ANAC58                                           --------->ETT(1)        --------->ANAC58                        ---------->DOF2   --------->RAP2.6(3) --------YAB1----------->GT1                 --------->AtLEC2   <---------MYB46(3)        <----------DOF2   tagtattggtacgcatggtaagatcagtaacttatatgaactaaaccattcaaagcatgtaaatggttgtcggcaaaacaacaatactatttcttttcac  11538900                  ------>MYB83                  ------>MYB46(1)                --------->DEAR3(1)               --------->At4g35610          --------->ANAC46         <-------TEIL                                            --------->ZAT14                    -        <-----------GT1                                         --------->ALFIN1           ----------     --------->ARR11(3)                                      <-----------RAV1(2)        --------->AHL20(2)     <---------ARR11(3)      ---------->DOF2           ---------->DOF2        ---------->DOF2     ---   aagggaatatatacatcacctccctcttaagtaaagctagtcgaattgaaaacacaataaggcccagtggagaacaaaacaaaagaagaataaaaaagag  11539000                   <------------CBF             <------------CBF            <---------ICU4            --------->ATHB51            -------->ATHB1            --------->ATHB12           --------->ICU4           <---------YAB1                                                                    --------           <---------ATHB51                                                                ------>MYB83     <-------TEIL --------->ATHB12                                  --------->MYB46(3)   --------->AtMYB61   <---------GLK1(2)                                           --------->ANAC58       --------->ANAC58   <---------ARR14(2)                        ---------->ID1    --------->ANAC46       --------->ANAC58   --------->ARR14(2)                    <----------DOF2       --------->ANAC58     --------->ANAC46 -------->YAB1<---------YAB1--------->MYB52(1)          <---------ICU4            *TSS--------->ANAC46 >DOF2     <---------AHL20(2)       <----------DOF2    <---------YAB1     ------>ZmHOX2a(1)------>MYB46(1) ------>GLK1(2)  <---------YAB1    <---------DAG2  <----------DOF2 ------------>CBF <---------ALFIN1   aatcagattcgaaattattgttattgggcctaatgggccttttctttttccttctttataattccacacaacaatcctctcattacacacaccaacgttg  11539100                                                                        ------>ZmHOX2a(2)                                                                       <------ZmHOX2a(2)                                                                       --------->GLK1(1)                                                                       <---------GLK1(1)                                                                      --------->ARR11(3)                                                                --------->YAB1                                                        ----------->HVH21          --------->ANAC58                                                      <---------At4g35610          --------->ANAC58                                                      --------->At4g35610          --------->ANAC46                                                      --------->ZAT2  <---------AGP1                                                   <------ZmHOX2a(2)  --------->AGP1              <--              <<<<<<<<<TBF1                       <---------ARR14(2)  <---------ARR11(3)         <---        <<<<<<<<<TBF1                             --------->ARR14(2)  --------->ARR14(2)      <------     <<<<<<<<<TBF1                                <-----------ARR10   <---------ARR14(2)  <----------DOF2  <<<<<<<<<TBF1        <----------DOF2           --------->At4g35610 <---------CCA1(2)  --------->HSFC1(2) ->TOE2(3) <<<<<<<<<TBF1      --------->At4g35610<---------At4g35610 --------->At4g35610<---------HSFC1(2)   attcttcttcttcttcttcttctctctttctcatctaaaccaaaaaatggcagatcagctcaccgatgatcagatctctgagttcaaggaagcttttagc  11539200                                            =========================================bZIP_DOF                                            <----------DOF2                                          ------>ZmHOX2a(1)                                     <----------DOF2                                     ================================================bZIP_DOF                                   <------ZmHOX2a(2)                                   ==============HOX2a_HOX2a                                  --------->ARR14(2)                                  <---------ARR11(3)                                  --------->ARR11(3)                                  <-----------ARR10                                  <---------ARR14(2)                                  <---------AGP1      ---------->DOF2             --------->AGP1                <---------YAB1 <---------ANAC58 --------DOF2                    <---------CCA1(2) <---------AHL20(2)          <---------ANAC58 ------DAG2       <---------HSFC1(2)=============HOX2a_HOX2a  --------->YAB1   <---------ANAC46 -----GT1         --------->HSFC1(2)------>ZmHOX2a(2)    <---------YAB1    <---------TGA1a---------->ID1   cttttcgacaaagacggagatggttcttctctctcagatctttcctcttttgtataattttcattcataatagactcacttgcgttttttttggtgtttt  11539300                                                          <---------ARR14(2)                                                          <---------ARR11(3)                     <---                                                          --------->ARR14(2)                  <------                                                      <---------LBD16                        <-------                                                   --------->RVE1(1)          --------->ANAC46-------                      <------ZmHOX2a(1)           <---------ARR11(3)    --------->TOE1(3)    --------                 <----------DOF2                  --------->ARR11(3)    --------->TOE2(3)   <--------                <---------ANAC58               --------->AHL20(2)     <---------YAB1 --------->CCA1(2)                <---------ANAC58        --------->WRKY38(1)           <---------TOE2(3)   <---------YAB1   gagtatcacttagtcttggctttaggaatttgatgctcttcgttgtccataaaatctctggatattcacattaacattaaacgcgagatttgatgatatc  11539400        <---------MYB52(1)       <-------GAMYB --------->AHL20(2)           --------->YAB1      --------->MYB52(2)             ------>ZmHOX2a(2)                                        -------      <---------MYB46(3)           <---------AGP1 <---------ICU4                           <---------ICU4    <---------MYB52(1)<---------YAB1<------ZmHOX2a(2)                                  <-----------GT1 -------DOF2        --------->YAB1 <-----------ARR10                               <---------ARR11(3) ---ARR11(3)    --------->AHL20(2) --------->ARR14(2)                              --------->ARR14(2) --GLK1(1)      <---------AHL20(2) <---------ARR14(2)                              <---------GLK1(2) -->ARR11(3)   <---------YAB1     <---------CCA1(2)                              --------->LBD16<---- ->GLK1(1)   --------->YAB1       <---------ARR14(1)       --------->TOE2(3)    <---------HSFB2a(2) -ARR11(3)  <---------YAB1--------->YAB1       --------->YAB1                   --------->HSFB2a(2)   tttatcgttcgttgattataaattataatcgcaatcggatctatctcgataataatctctaacttaatcgtgttttagtcttccagattttactaattgt  11539500                                                                        <---------WOX13(1)                             --------->ATHB51                        --------->AHL20(2)                             --------->YAB1                          <---------AHL20(2)     <------MYB46(1)                            <---------ATHB12                <---------RVE1(1)               <------MYB83  <---------YAB1--------->TOE2(3)                          <---------ARR11(3)               --------- -->YAB1      <---------ARR11(3)                           <---------GLK1(2)               --------->MYB59 -----YAB1   <---------CCA1(2)                             --------->ARR11(3)    <---------MYB52(1)   gattagaattgacacaaatcttagaattcaataatcgaagtagattacattgacatttgtagattttttgtttaattgattcagttatttgagtaggtta  11539600  Previous    Next  AGI:  At2g27030.1    Description:  CAM5 (CALMODULIN 5); calcium ion binding. Identical to Calmodulin-2/3/5 (CAM5) [Arabidopsis Thaliana] (GB:P25069); similar to CAM2 (CALMODULIN-2), calcium ion binding [Arabidopsis thaliana] (TAIR:AT2G41110.1); similar to CAM3 (CALMODULIN 3), calcium ion binding [Arabidopsis thaliana] (TAIR:AT3G56800.1); similar to calmodulin 4 [Daucus carota] (GB:AAQ63461.1); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048) Range:  from: 11539082    to: 11540354    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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