Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                      --------->AHL20(2)                                    <---------AHL20(1)                                    <---------AHL20(2)                               <---------AHL20(1)                  <---------AHL20(2)    <------ZmHOX2a(1)             --------->AHL20(2)--------->AHL20(2)               --------->YAB1<------NtERF2         <            --------->AHL20(2) --------->AHL20(1)               <---------ICU4----------->HVH21    <- ---------DAG2                --------->AHL20(2)               --------->ICU4--------->LBD16       <- ------ALFIN1<---------AHL20(2)<---------AHL20(2)         --------->PCF2   <---------LBD16         <-   caatttttccaaaaaaaaattttactaagaaattttattttattttgagttttgcaataggtcccataatgaattgagccgggactggataggaccaagt  11254100                                 <------MYB46(1)                                      --------->TOE2(3)                                 <------MYB83                                       <---------TOE2(3)                                 <---------ANAC46                      --------->ARR14(2)                                <------MYB46(1)                        <---------ARR14(2)                                --------->MYB59                     <---------TOE2(3) --------->TOE1(3)       --------->YAB1           <------MYB83                        <---------TOE1(3)----------->GT1   <---------YAB1               <---------MYB46(3)        ----------->HVH21         <---------YAB1  <---------TOE1(2)            --------->ALFIN1         ----------->RAV1(2)         <---------TOE1(3)  <---------TOE2(2)           <<<<<<<<<MYB98            ----------------->AGL1 <---------TOE1(2) ---------SPL7                <--------P                <---------ANAC58    --------->TOE1(1) --------ANAC58              <-------GAMYB              <---------ANAC46   ------>ZmHOX2a(1) --------ANAC58       <---------YAB1               --------->ATHB12 <---------YAB1 <---------DOF5.7(2) --------ANAC46     --------->YAB1     ---------->DOF2  <---------ANAC58  <---------ANAC46---------->DOF2   gtcgtatgatcaaaatatacaattgtgactgggttgggtctaaaagtctaaaaccattgcctgaaacgttatggttcctcgtagttatcgttaaaagaga  11254200                             --------->YAB1                         <---------YAB1                        <---------AHL20(2)                        --------->AHL20(2)                       --------->YAB1                      <---------YAB1                      <---------------AGL15                  ------>ZmHOX2a(2)                 <------ZmHOX2a(2)                <---------ARR14(2)                --------->ARR11(3)                <---------ARR11(3)                --------->AGP1                                                            --------->YAB1                <-----------ARR10               <---------ARR11(3)                     --------->WOX13(1)                <---------AGP1                  --------->ARR11(3)             --------->AHL20(2)                --------->ARR14(2)--------->MYB46(3)  <---------YAB1           <---------AHL20(2)               <---------CCA1(2)--------->MYB52(1)------>ZmHOX2a(2)--------->YAB1     --------->MYB46(3)   gattgtttcaatcttacagatcttattaaaatagtaaccgatgtgaatgtgatcttattactaacaaaatcaaaatccaaattaaacaacaatcagagac  11254300                                                           --------->AHL20(1)                                                           <---------AHL20(1)                                                           <---------ARR11(3)                                                       ---------->DOF2                                                  --------->MYB46(3)                                           --------->KAN4(1)                                           <---------KAN4(1)            <---------ANAC46                     <---------AHL20(2)   --------->ARR14(2)<---------CCA1(1)            XXXXXXXXXXXXXXXXXXXX>MIR862-3P<---------KAN4(2)--------->ARR11(3) <---------TOE2(3)            <-----------GT1       <------ZmHOX2a(2)------->GAMYB       ---------->ID1               <     <-----------GT1 <-----------GT1      <---------ARR14(2)<---------RVE1(1)--------->MYB52(1) -----   atcgttttctctatatactatatttacttaaacacgatcgatcgaatattcaaccaaaaaagatatttgttttgtcgtctaacgaagactaaacaaaaca  11254400                                                             *TSS                  ---------->ID1                          --------->ANAC46               --------------->AtSPL8                     --------->ANAC58                     <----- ---------ANAC55(2)  <----------DOF2                      --------->ANAC58                   ------>ZmHOX2a(1) ---->TOE2(3) <----------DOF2                           <---------ALFIN1              <---------ZAT18   ttaagtaaacccattcctttgtacttttaaaaacatagcagtctcttctctacttgctccaagccttcaacattttcttctcaaatggcgctctcctctt  11254500                                                   <---------ARR14(2)                                                   --------->ARR14(2)                                        <---------ANAC58                                     ------>ZmHOX2a(1)                        ------>ZmHOX2a(1) <---------MYB52(1) -------->P                  <---------At4g35610                     ------>ZmHOX2a(1)  <---------ANAC58    <-----------GT1              --------->At4g35610 -----DOF2    <---------YAB1  --------->ZAT14  ---------->ID1------->TEIL         ------->TEIL   tcaatctctcttctctattattcctcctcttcttcactccttccgttttctcgtattcgtatcaaccttctctaaaccctcatgaaacttctgctacaag  11254600                          <---------AtLEC2                         <-------TEIL                      --------->At4g35610                      <---------At4g35610                 --------->ARR14(2)                 <---------ARR14(2)                <---------CCA1(2)           <-----------GT1              ----------->RAV1(1)           --------->ANAC58             ------>ZmHOX2a(1)          --------->ANAC58         ------>ZmHOX2a(1)           --------->ANAC46      <-----------GT1                   --------->ANAC58      ------>ZmHOX2a(1)           --------->ANAC58------->TEIL--------->TOE2(3)     ----------->RAV1(1)    <----------DOF2   tttctgcaaaaacacaccatatccagatgcatgttttacctccttaaaactatccatctccatcaacataagccccaacattctctctttcctcctccaa  11254700                                                    <------NtERF2                                                    --------->ATERF1(1)                                                    <----------CDC5                                                  <---------DEAR3(1)                                               <-----------RAV1(1)                                           <----------DOF2                            --------->ALFIN1                                       ------>ZmHOX2a(2)          ------->GAMYB  <---------WRKY12                      <---------ANAC46<------ZmHOX2a(2)          <---------MYB111(1) <-------MYC3                     --------->ZAT2   <---------GLK1(1)          --------->MYB46(3)  ------->MYC3                  --------->LBD16     --------->GLK1(1)          <---------MYB111(2)<---------O2             <----------DOF2         --------->ARR14(2)          <---------MYB55(2) --------->O2      ---------->DOF2<---------ZAT2  <---------ARR14(2)   --------->GLK1(1)      <---------WRKY38(1)-   accctccaaacagctctttccgaggctgggaaactcaccgatctcctttctggcgctggggtctccaacaacctagttgagggacaacgtggctctcttc  11254800                 <---------ALFIN1                --------->ANAC46              <-----------GT1           ------>ZmHOX2a(2)                                                                  -------          <------ZmHOX2a(2)                                                                  <------NtERF2         --------->ARR11(3)                                             <---------TOE1(3)   <--------         <---------ARR11(3)                                             <---------TOE2(3)   ------>NtERF2         --------->ARR14(2)                                            <-----------GT1     ----------         <---------ARR14(2)                              <------ZmHOX2a(2)      --------->ANAC58         <-----------ARR10                               --------->CCA1(2)      --------->ANAC58         --------->ARR14(3)                             --------->ARR14(2)      --------->ANAC46         --------->AGP1                                 <---------ARR14(2)      --------->ANAC55(1)         <---------ARR14(3)       <---------ANAC58      --------->ARR11(3)     <---------LBD16-------       ----------->ARR10          <---------ANAC58      <---------ARR11(3)    --------->MYB52(1)     ---------->DOF2           <----------DOF2          --------->AGP1 <---------DOF5.7(2) --------->DEAR3(1)   <---------ZAT14 --------->bZIP60(2)        --------->WOX13(1)     --------->DOF5.7(2)  --------->DEAR3(2) -------->RAP2.6(3)--------->ANAC46         <------ZmHOX2a(2)   <---------DEAR3(1)      --------->MYB52(1)   aagactgcaaagatcttcaccacatcacttcttctttcttgaaacgatcaatctccaagatccaagacggtgttaacgattcacggaaactagccgacgc  11254900                ------>NtERF2                <---------At4g35610                --------->At4g35610               --------->DEAR3(1)               --------->RAP2.3(2)              --------->ATERF1(1)              --------->ORA47(2)              <------NtERF2              --------->RAP2.3(1)              <---------ARR11(3)             ---------->DOF2         ---------->CDC5                       <---------ARR14(3)         --------->ANAC58       <---------MYB59                         --------->ARR11(3)         --------->ANAC58     --------->SPL7                    <---------ANAC58                   --------->ANAC46     ------->TEIL                      <---------ANAC58                 ---------->DOF2     <-----------ARR10    ------>MYB46(1)      --------->ARR14(3)      <---------ATHB12   <---------SPL7         ------>MYB83--------->ATHB12                --------->ANAC58   --------->ZAT18        -------->P<-------MYC3                      --------->ANAC46  <---------ANAC58       ----------->RAV1(1)  <------MYB46(1)         --------->ANAC58  <---------ANAC58     --------->MYB46(3)     <------MYB83          <---------ALFIN1 -->ANAC58    --------->DEAR4(2)    ------->MYC3                   <---------ZAT18 -ATERF1(1)  <---------RAP2.3(1)<------ZmHOX2a(2)                  --------->ZAT18            <------ ->HVH21 --------->MYB52(1)    --------->ARR11(3)                  <-------TEIL               ------>ZmHOX2a(1) -->ANAC58  --------->ANAC46   <---------ARR11(3)             <-----------RAV1(2)     ----------->HVH21   tagagcgtacctaagcgccgctctcaccaacaagatcacatgcttggaaggtcttgaatcagcctcaggtccactcaagccaaagctcgtgacctccttc  11255000  Previous    Next  AGI:  At2g26440.1    Description:  pectinesterase family protein. similar to ATPMEPCRB, pectinesterase [Arabidopsis thaliana] (TAIR:AT4G02330.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65169.1); contains InterPro domain Pectin lyase fold (InterPro:IPR012334); contains InterPro domain Pectinesterase, catalytic; (InterPro:IPR000070); contains InterPro domain Pectin lyase fold/virulence factor (InterPro:IPR011050); contains InterPro domain Pectinesterase inhibitor; (InterPro:IPR006501) Range:  from: 11254461    to: 11256571    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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