Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100         ------>ZmHOX2a(2)    --------->ATHB12              <----------DOF2                   <---------AHL20(2)              <  <---------WOX13(1)            <---------MYB46(3)                  --------->ATHB12               <- ------->HAHB4                 <---------AtMYB61                   --------->AHL20(2)              <- --------ATHB1              <---------MYB46(3)                 <---------YAB1                      -- -------->ATHB12           <---------ANAC46                    <---------AHL20(2)                  -- ---------ICU4             <---------ANAC58               ------->TEIL                             <- ------->ICU4              <---------ANAC58       --------->ANAC58 <---------AHL20(2)              -- --------YAB1--------->ATHB12 <---------MYB52(1)  --------->ANAC58 <---------AHL20(1)      --------->At4g35610 ------ICU4<----------DOF2<---------ZAT2 <---------MYB46(3)  --------->YAB1                <---------At4g35610 -->YAB1 ----------->GT1  <---------At4g35610 <---------HSFB2a(2)  --------->AHL20(1)     ------->TEIL   aatgattgatcgggtttattggttttgtagctggtggtttaagtggttagggaagctatgtatttataatttattgattcaatatggttttgcatctgaa  11203700             <---------ATHB12             --------->MYB46(3)             <---------MYB55(2)            --------->ANAC58            --------->ANAC58                                                                      <--            ------>MYB83                                                                         ----            ------>MYB46(1)                                                              --------->ATHB12            -------->P                                                                   <--------ATHB1 ---------AHL20(2)                                                                       --------->YAB1 --------AHL20(1)                                                                        <---------ICU4 --------AHL20(2)                --------->ANAC58                                        -------->HAHB4 ------->AHL20(2)      <-----------GT1                                                  <---------YAB1 ------->AHL20(1) --------->YAB1 --------->ANAC58                                       <---------ATHB12 --------ARR11(3)<---------ATHB12--------->ANAC46                                       --------->ICU4 ------->ARR11(3)--------->AHL20(2)         <---------MYB52(1)                         <---------TOE2(3)   atatatttaagcccaaccaataaatataccatcactcgccaagaccgtttctcagtggaaacattttgtgagaagttcaagtcgatgttaatgattgtaa  11203800                                     <---------------AtSPL8                                   <---------AHL20(2)                                 --------->CCA1(2)                                          ------>ZmHOX2a(1)                                <---------ARR11(3)                                  <---------AHL20(2)   <-----------GT1              --------->ARR11(3)              <-----------GT1     <-----------GT1   --------->MYB52(1)   <------MYB83---------->DOF2      <---------ANAC46     <----------DOF2    ---- ----ZmHOX2a(1)         <------MYB46(1)                <---------ANAC46    ------->TEIL<----------DOF2 ----->ICU4            <---------TOE1(2)            <-----------RAV1(1)   <---------CCA1(2)--------->TOE2(3)   ggatttaacggatgtgatgtttttgtaggttgaagatttaaagtactatatgatatgttgtgtttttatcgattttgaatctttattttctttcctaaat  11203900                       --------->ANAC58                       --------->ANAC58                    --------->ZAT2                 ------>ZmHOX2a(1)         <---------AHL20(2)                                                              <---------RVE1(1)         --------->AHL20(2)                                                --------->ANAC58         --------->AHL20(1)                                                --------->ANAC58 <--------         <---------ARR11(3)              --------->CCA1(2)          <---------At4g35610  <---------CCA1(1)         --------->ARR11(3)             <---------ARR11(3)          --------->At4g35610 --------->ARR11(3)         <---------AHL20(1)          --------->HSFB2a(2)--------->ZAT2   ---------->DOF2<---------ARR11(3) ----->YAB1    ----------------->AG  <---------HSFB2a(2)<---------ZAT2------->GAMYB     <---------AHL20(1)   caaaactgcaatatatttcctaagctagcaaaacccattctagatataagtagagtccagcttgtaatgcaactgcaaagcaaaaatcaagatatttcga  11204000                                                                           --------->TOE2(3)                                                                          *TSS                                                                    --------->ICU4                                                                  --------->YAB1                                                                  <---------ICU4                                                                  <--------ATHB1                                                              <---------------AGL15                                                              --------------->AGL15                                                             ----------------->AGL1                                                             ------------>CBF                                                             <-----------------AGL3                                                             <-----------------AG                                            <---------ALFIN1 <-----------------AGL2                                          =====================================MADS_MADS                                          --------------->AGL15  --------->ICU4                                          ====================================MADS_MADS                 <---------AHL20(2)       <---------------AGL15  <---------ATHB12                  <-                --------->AHL20(2)        ----------->RAV1(1)<-----------------AGL1           <------          <---------bZIP60(1)            ----------------->AGL1  <---------ATHB51            --------   <------ZmHOX2a(1)                 <---------ANAC58        ----------------->AGL3         --------- ---GT1   --------->bZIP60(1)        <---------ANAC58        ----------------->AGL2     --------->AHL20(2)   tacaaggacttgatgtcataaaattccaaatttgttttgtcttgccacacttagtaattctcttccaataatggttaacttaatagtatataaaataaaa  11204100                         ====================bZIP_DOF                 <---------AHL20(2)                 --------->AHL20(2)                --------->ICU4           <---------ANAC55(1)           <---------ANAC58           <---------ANAC46        <---------O2           <---------ANAC55(2)     ========================bZIP_DOF           --------->ANAC55(2)     --------->TGA1a        <---------ARR14(2)         <---------TGA1a            <-----------GT1   <---------ARR14(2)    <----------DOF2   <-------TEIL      --------->WRKY38(1) ------TEIL<---------ANAC58        --------->O2              ----------->HVH21              <-------- ---AHL20(2)--------->LBD16    <-----------HVH21             --------->WRKY12              <---------DAG2 ->YAB1 --------->ARR14(2)     <-----------TGA1     <-----------GT1                      <---------ARR11(3) >AHL20(2) ----------->GT1    --------->YAB1    <----------DOF2  <---------ALFIN1       <------ZmHOX2a(1)   atgcatataggttccgtaattaatcttctttatcgtcacgagaggcacatcttttttcaacatttgaccactctctctctctctctctcaggacctttcg  11204200                                                                                         <---------AHL20(2)                                                                             <---------AHL20(2)                                                                         <---------AHL20(2)  <-------TEIL                                                                        <---------YAB1  <---------AHL20(2)                                                              --------->AHL20(1)        --------->AHL20(2)                                                  ------>MYB83--------->ARR11(3)    --------->AHL20(2)                    <---------ANAC58              ------>MYB46(1)      --------->AHL20(2)--------->AHL20(2)                    <---------ANAC58         <-----------GT1  <---------ARR11(3)    <---------AHL20(2)      <---------ANAC58                  <----------DOF2    --------->AHL20(2)<---------AHL20(1)  <---      <---------ANAC58              <----------DOF2     <---------AHL20(2)   --------->AHL20(2)  ---- --DOF2         <----------DOF2 <----------DOF2 <---------MYB59 <-----------GT1 <---------YAB1-------   gcgtaatttcgtcttcccctttgcttaacattttctttctttctttttgaccaaatattaaaaatatatccatttttattttatttttaattaaattcat  11204300                        ---------->DOF2                      <---------AHL20(2)                      --------->AHL20(2)                      --------->YAB1                            ---------->DOF2                   --------->YAB1                   ----------->GT1<---------LBD16                  <---------YAB1                    --------->ANAC58        --------->DAG2 <--------ATHB1       <---------AHL20(2)                           --------->ANAC58       ---------->DOF2 --------->YAB1 ------ICU4     --------->YAB1                      ------------------------>ANAC81       <---------ATHB51 ----->ATHB51------->TEIL                  ---------->DOF2   --------->TOE2(3)  ----------->GT1    <- -->YAB1  --------->ANAC55(2)         ------------------------>ANAC81  ---------->DOF2    <---------YAB1   aatttgcattttatgtatttataataaaaaggagagaataaatccaaaagagtgaagcaaaaacattaaagcggaaagaaagtggtaaaacaataataga  11204400                                                                                                    <                                                                                                    -                                                                                                    -                                                                                                   --                                                                                                   <-                                                                                                   <-                                                                                            <--------                                                                       <<<<<<<<<TBF1        ---------                                                                    <<<<<<<<<TBF1        <---------ANAC58                                 --------->At4g35610           <------------------------ANAC81    <--           --------------->AtSPL3<---------At4g35610        <----------DOF2          <---------ANAC58       --------->At4g35610    <---------At4g35610        <-----------GT1  <<<<<<<<<TBF1  <---------ANAC58  <------ZmHOX2a(1)        <<<<<<<<<TBF1              --------------->AtSPL8 <<<<<<<<<TBF1<---------ZAT18 ----------RAV1(2)      <<<<<<<<<TBF1         --------->ARR11(3) <<<<<<<<<TBF1       <---------ANAC58   aacaggagaagcagaagtactacttcttcttcttctgctctcttctcagaccttgttttgtactttcttcttcttcttcttcttcttgtttgcgaactcc  11204500 ---------ARR11(3)                                    <---------DAG2 -------->ARR14(2)                        <---------At4g35610 -------->ARR11(3)                        ----------->GT1  <----------DOF2 ------->GLK1(1)                          --------->At4g35610 --------GLK1(1)             <----------DOF2          <----------DOF2               <----------DOF2 --------CCA1(2) --------->WRKY12       <-----------RAV1(2)<---------DAG2         <---------------AGL15 -GLK1(1)      <----------DOF2     ===============================================================MADS_MADS >GLK1(1)     --------->TOE2(3)    <---------------AGL15<-----------GT1           --------------->AGL15 -------MYB52(1) --------->WRKY38(1)<<<<<<<<<TBF1  <-----------GT1   -------->P<-----------GT1  <----   gatatcttcttcactacctttgactccatttctttttcttcttcaggtgaattctactttacttttcttcttaccccaaatttactcttttgggttttat  11204600  Previous    Next  AGI:  At2g26300.1    Description:  GPA1 (G PROTEIN ALPHA SUBUNIT 1); signal transducer. Identical to Guanine nucleotide-binding protein alpha-1 subunit (GPA1) [Arabidopsis Thaliana] (GB:P18064); similar to XLG3 (EXTRA-LARGE GTP-BINDING PROTEIN 3), signal transducer [Arabidopsis thaliana] (TAIR:AT1G31930.1); similar to XLG3 (EXTRA-LARGE GTP-BINDING PROTEIN 3), signal transducer [Arabidopsis thaliana] (TAIR:AT1G31930.2); similar to G protein alpha subunit [Phaseolus lunatus] (GB:BAF30964.1); similar to hetrotrimeric G protein alpha subunit [Phaseolus vulgaris] (GB:ABV60388.1); similar to Guanine nucleotide-binding protein alpha-1 subunit (GP-alpha-1) (GB:P49082); contains Inter Range:  from: 11204074    to: 11208180    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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