Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      -                                                                                                    <                                                                                                    <                                                                                                 ----                                                                                                -----                                                                                               ------                                                                                              <------                                                                                             ------->GAMYB                                                                                             <-------                                                                        --------->LBD16    --------->ANAC58                                                                       <---------ANAC55(2) --------->ANAC58                                                                       --------->ANAC55(2) --------->ANAC46                                                            --------->ARR11(3)     <---------MYB52(1)                                                            <---------ARR11(3)  --------->MYB46(3)  -    --------->GLK1(2)                                    --------->HSFB2a(2) --------->MYB46(3)------ ------>AHL20(2)                                         <---------HSFB2a(2)<------ZmHOX2a(2)-------- -------YAB1                                    <----------DOF2       <---------LBD16  <-----------GT1 ---->YAB1       ------->TEIL                  --------->TOE2(3)   <---------GLK1(1)<---------MYB46(3)   ataaatattctgaggcatgaactctcttacacacatattagtctcaaaacctttagcatctagatgttgaattccgcgatcaaccgttgttacaacccac  11099800         <---------ATHB12     --------->MYB46(3)   --------->MYB52(1)  ----------->HVH21 <---------MYB52(2) -------->At4g35610 ---------ZAT2 ---------At4g35610 ----->MYB46(3) ---->ANAC46                                                                                        < >MYB83  <------ZmHOX2a(2)                                                                          < ---ALFIN1                                                                                          < --MYB55(2)                                                                                     <---- -------->ZAT2                 --------->YAB1            --------->YAB1                      -------- >MYB46(1)--------->YAB1      <---------YAB1             <---------ANAC58                   --------- ->MYB46(3)                 --------->YAB1               <---------ANAC58    <---------HSFB2a(2)<----   ccagctaaccgatcatcgtcgtaagtgtattcatcatacttcaacttgaattttcgcattcgtgattttcgattaaactcgagaaaattgtcgataaagc  11099900                         ------>NtERF2                        --------->WRKY12 ---------ANAC46        ----------->HVH21                                                           - ---------ANAC58      --------->At4g35610            --------->ANAC58                              <- ---------ANAC58  <---------GLK1(1)                  --------->ANAC58                            ---- -----ANAC58      --------->GLK1(1)                  --------->ANAC46                           ----- ->DAG2   <-----------TGA1           --------->HSFB2a(2)                                      <------ ->DOF2   <-----------HVH21 <----------DOF2  <------ZmHOX2a(1)                                ------- -----ANAC58<-----------RAV1(2)      <---------HSFB2a(2)                        ---------->DOF2<-----   ttgcgtagttttcgtcagggaaatcgctgacttttaagtcgagaacaggaaccctaagccagagaaattcccatcgtttcgataaaacgcttgttttaac  11100000                                                          <---------GLK1(2) -------->GLK1(2)                                         --------->ARR14(2)                 -------- --------GLK1(2)       <---------ZAT14                  <---------TOE2(2)                   ========= --->GAMYB        <---------YAB1          <---------ARR14(2)                                ------>ZmHOX2a(1) ---->ANAC46    --------->CCA1(2)         --------->GLK1(2)--------->GLK1(2)            <---------ARR11(3) -----GT1--------->ETT(1)                 --------->ARR14(2)     --------->YAB1--------->ANAC46 -->MYB52(1)  <------MYB46(1)            <---------GLK1(2)<---------ARR14(2)   --------->ANAC58 ----LBD16    <------MYB83           ---------->DOF2    <---------TOE1(2)      --------->ANAC58   ggaatctatggtcggaaggtatgagagtacttgagttagtaaagaatctggcaattcgcagattctatcgcaattcatcgcaagaaacaaaatcctaaag  11100100                                                                               ----------->HVH21                                          <---------ANAC55(2)                 ------>ZmHOX2a(2)  <---                                          --------->ANAC55(2)                <---------At4g35610 <---                                  --------->ANAC58              <-----------ARR10                <---                     ----------------->AGL2                     <---------ARR11(3)     --------->DEAR3(1)                     ----------------->AGL1                     --------->ARR11(3)    <---------LBD16                     ----------------->AGL3   <XXXXXXXXXXXXXXXXXXXXMIR166A-G--------->ARR14(2) ------                    ------>ZmHOX2a(2)   --------->YAB1 <------MYB83         <---------ARR14(2) <-----          <---------HSFB2a(2)     --------->ANAC58 <---------ZAT2           <---------AGP1    ------- -->DOF2  --------->HSFB2a(2)     --------->ANAC46 --------->ZAT2    <---------At5g28300--------->LBD16 ==========================HOX2a_HOX2a <---------ATHB12<------MYB46(1) --------->DEAR3(1)<------NtERF2   tatcaaatagtttcagaactgatcccaaaatcagacacacaatcatgtaatcgagcttggtctgaagaactcaccgtcgatctgactcgccggagaatta  11100200                                                                      <-------GAMYB                                                                     <---------ANAC46                                                                    <------NtERF2                                                                   ------>NtERF2                                                                   --------->LBD16                                                                   <---------ATERF1(1)                                                                  <---------DEAR3(1)                                                                  --------->DEAR3(1)                                                                  --------->ATERF1(2)                                                                  <---------ATERF1(2)                                                                ------>NtERF2                                                                <---------RAP2.3(1)                                                                <---------ATERF1(1)                                                               --------->DEAR3(1)                                                              --------->ATERF1(1)                                                             <-----------HVH21                                                             <---------ATERF1(1)                                                            --------->DEAR3(1)                      <                                                          <---------At5g28300                <-------                                                       <-----------HVH21                     -------- ------YAB1                                          ------->MYC3--------->ATERF1(1)         <------- ------TOE1(3)                                       ------->MYC2<------NtERF2            --------->LBD16 ------TOE2(3)                                       <-------MYC3<---------LBD16         <---------LBD16 --->YAB1                         ----------------->AGL1----------->HVH21    <---------At4g35610   -- ----ICU4                         *TSS               <-------MYC2--------->RAP2.3(1)    ------>ZmHOX2a(2) -->ICU4--------->MYB52(1)       ------>ZmHOX2a(2) ------->TEIL<---------DEAR3(1)      <------ZmHOX2a(2)   tggttgaagttatcggagtagagtttcaaaattgatcccaaaatgtgaatgtgaacgtgtcaccgtcgccggcgttgttatctgatacgatcggggattg  11100300         <---------ANAC58   <------------CBF                <---------CCA1(2)  --------->ATHB12          --------->ARR11(3) ---------MYB59             <---------ARR11(3)       <---------YAB1 -----CBF<---------ANAC58  <---------GLK1(1)  <---------YAB1                                  ------- ->ARR14(2)                <---------CCA1(2) <---------TOE2(3)                                <------ --ARR14(2)              --------->YAB1     <-----------GT1                                <---------REM1(2) --------------->AGL1 <------------CBF--------->TOE2(3)                   ----------------->AGL1-----   ggcctaattgggcttgaataagcccattgatatcttcttatcttatttacgatttatgaaaaaaaactcttcttatcccaaaatgtgaatgtctactcag  11100400                                                                                <---------YAB1                                                                                --------->ICU4      --------->YAB1                              <-------TEIL                 <---------TOE2(3) -------->AtSPL8                       --------->At4g35610                    --------->YAB1 ---ICU4                               <---------At4g35610         <------ZmHOX2a(1)  <---------YAB1< ---->ZAT14                       <---------HSFB2a(2) <------ZmHOX2a(1) <-----------GT1--------->YAB1   tactcaaatgatatcaaaccgaagaacatagtttgtctggatgctgactcggttcaggaccatttggaaggattttactataatgtttattatcacatgt  11100500                                                                          --------->AHL20(2)                                                               --------->AHL20(2)                                                               <---------AHL20(2)                                                              <---------AHL20(2)                                                          <---------AHL20(2)                                                         <---------AHL20(2)                                                         <---------AHL20(1)                                                         <---------ARR11(3)                                --------->ZAT6           --------->ARR11(3)      ------->TEIL                           --------->TOE2(3)             --------->AHL20(1)   --------->ANAC55(2)    --------->YAB1         <----------DOF2               --------->AHL20(2)   <---------ANAC55(2)   <---------YAB1       <---------AHL20(1)          <---------AHL20(1)  --------->AHL20(2)  <---------AHL20(2)    <---------ARR11(3)          --------->AHL20(2)  --------->AHL20(1)  --------->AHL20(2)    --------->ARR11(3)          --------->AHL20(1) --------->YAB1 --------->ANAC58  <---------AHL20(1)   --------->RVE1(1)           --------->YAB1    --------->AHL20(2) --------->YAB1        --------->CCA1(1)        <---------AHL20(2)  --------->YAB1    --------->ANAC46 ---------YAB1     --------->AHL20(2)          --------->AHL20(2)  --------->AHL20(2) --------->ANAC58   ttattataatgttcaaaaccatataatatctttaacactattgatactattaaatataatatattttaaataaaaataatatgtatccaagaaaatggat  11100600                              <---------AHL20(2)                             --------->AHL20(2)                          --------->YAB1                                                           --                         <---------YAB1                              <---------AHL20(2)         -----                  <---------ARR14(2)                --------->AHL20(2)                      <--------HAHB4                  <---------ARR14(3)           <---------AHL20(2)    --------->AHL20(2)     ---------                  --------->ARR11(3)         <---------CCA1(1)       --------->AHL20(1)     <--------                  --------->ARR14(3)         <---------RVE1(1)       <---------AHL20(1)    --------->ICU4                  --------->ARR14(2)        <---------ARR11(3)  --------->ARR11(3)         <---------YAB1                  <---------ARR11(3)        --------->ARR11(3)  <---------ARR11(3)      <------ZmHOX2a(2)                ----------->ARR10           <---------GLK1(2) ----------->GT1          <---------ARR11(3)       <----------DOF2--------->ICU4       <---------RVE1(1)---------->DOF2            --------->ARR11(3) <---------At4g35610  <---------YAB1  ---------->DOF2   <---------AHL20(2) <---------YAB1--------->YAB1   tttagctatctttttaagaagatattgattataaaatttgtaaagagattttttttatataaaaaagataataaattatgttagaagaagatcataatta  11100700  Previous    Next  AGI:  At2g26030.1    Description:  F-box family protein. Identical to F-box/FBD/LRR-repeat protein At2g26030 [Arabidopsis Thaliana] (GB:Q8H1M0;GB:O80993;GB:Q3EBT9); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT5G44950.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN74740.1); contains InterPro domain Leucine-rich repeat 2 (InterPro:IPR013101); contains InterPro domain FBD (InterPro:IPR013596); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain FBD-like (InterPro:IPR006566) Range:  from: 11098412    to: 11100234    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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