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UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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1        10        20        30        40        50        60        70        80        90        100 
     --------->bZIP60(1)                                 <---------MYB52(1)
  ----------->HVH21                             --------->ARR11(3)
--------->O2                                    <-----------GT1
--------->ANAC55(2)                             <---------ARR11(3)
--------->TGA1a                                --------->RVE1(1)                              ------
<---------O2                                   --------->CCA1(1)                              ------
<---------ANAC55(2)<<<<<<<<<<<<<<<<<LFY        --------->GLK1(1)                     ---------->DOF2
>AHL20(2)  --------->YAB1             --------->TOE2(3) <----------DOF2         ------>ZmHOX2a(1)
>YAB1<---------bZIP60(1)           <-----------GT1  ------>ZmHOX2a(1)   --------->GLK1(2)<----------ID1
 
gacacatgacaccatcatatgaatacaatggtctcatttaacctctacaaatatccttcctttagtctcaacaagtttctgtcctgagtaaagggacagg  10869700
                                                                                                 ---
                                                                                                ----
                                                                                                <---
                                                                                               <----
                                                     <---------GLK1(1)                         -----
                                                     --------->GLK1(1)                         <----
                 ------>MYB83                    <---------TOE2(3)                 <-----------GT1
                 ------>MYB46(1)          --------->ANAC55(2)                  <----------DOF2 -----
         --------->MYB59                 <---------LBD16             <---------ARR14(2)        -----
--->ANAC58     <---------MYB46(2)       --------->MYB52(1)         <---------ARR14(2)         <-----
--->ANAC58     <---------MYB59         ----------->HVH21           --------->ARR14(2)--------->ZAT6
 
ccaaataggtgttagataccaaactaaaaacattcaaacaggctcacgggttatggatttctcatcagcgaatatttgggaacttttaacacaattcgga  10869800
      <---------ANAC58
      <---------ANAC58
--->ZmHOX2a(2)
----->GLK1(1)                                 --------->ANAC58 <------MYB83
---ZmHOX2a(2)                          --------->GLK1(1)    <---------ANAC46
-------ARR10                   --------->LBD16--------->ANAC58 <------MYB46(1)
---->ARR11(3)                 --------->HSFB2a(2)           <---------ANAC58
-----ARR14(2)                 <---------HSFB2a(2)           <---------ANAC58
---->ARR14(2)                 --------->HSFC1(1)       <---------AtMYB61 <----------DOF2
---->AGP1             <---------MYB52(1)  --------->YAB1   <---------MYB46(3)     ----------->GT1
----CCA1(2)    ---------->DOF2<---------HSFC1(1)     <------------CBF---------->ID1     <----------DOF2
 
tctactctcgcttggcataaaagctgttttgttccagaacagaattcataagcatgcattggtgcttggtttgtcactttgtgaaatgtgactttgaata  10869900
    ------>MYB46(1)                        ------>ZmHOX2a(1)
    -------->P              --------->ARR14(2)                 --------->MYB46(3)
    ------>MYB83 <------------CBF     <---------CCA1(2)   --------->TOE2(3)                        <
   ------>ZmHOX2a(1)        <---------ARR14(2)--------->YAB1   <---------MYB52(2)          <--------
 
gccatcctacctcttggcagaattgtttttggatttgggttatatcctatcaaattccaaaacttaacaaaccagttttgtttgatttcaactggaatct  10870000
                             --------------------->WRI1
                        <----------DOF2                                           <----------DOF2
                     <---------ARR11(3)                                     --------->ANAC58
                     --------->ARR11(3)                                     --------->ANAC58
                     <---------ARR11(1)                                    --------->SPL7
-----------GT1      <---------CCA1(2)                             <---------HSFB2a(2)             --
-GLK1(2)        ------>ZmHOX2a(1)     ------->TEIL                --------->HSFB2a(2)      <--------
 
tataactagctcatagttcctacatatcttttttttgtttgaatctactacatatcaggcagtagtattctagactcggacgaaactttattagtccaaa  10870100
           --------->ANAC58
           --------->ANAC58
           --------->ANAC46
         --------->MYB52(1)
         ------>MYB46(1)
         ------>MYB83
        --------->MYB55(1)
       <---------MYB111(1)
       --------->MYB46(3)
       <---------MYB52(2)
       --------->AtMYB61                        <---------ALFIN1
       <---------MYB111(2)                     ----------------->AGL1
       <---------MYB55(2)                     --------->SPL7
       <---------MYB46(2)                    <---------PCF5
      --------->ANAC58                --------->ANAC55(2)
      --------->ANAC58                --------->ANAC58                                          ----
      --------->ANAC46                <---------ANAC55(2)                                       ----
     ----------->RAV1(1)              --------->ANAC58                                        <-----
   <------NtERF2                     <---------LBD16                                          ------
   --------->At4g35610            <-----------HVH21                                           <-----
   <---------ZAT14     <-------TEIL----------->HVH21                         <---------TOE1(2)<-----
   --------->ZAT18    --------->CCA1(2)     <---------SPL7       <---------ARR14(2)           <-----
  <---------ATERF1(1)<---------ARR14(2)  --------->MYB52(1)      --------->ARR14(2)           ------
------->MYB59        --------->ARR14(2)----------->HVH21         <---------GLK1(2) <-----------GT1
---------AGL1 ---------->DOF2    --------->ANAC46        --------->ALFIN1   ------>ZmHOX2a(1)-------
 
ttaggctgcaccaaacgaaatgcagatacatcatacatgtcacggaccggaccacatcgggtttggcagatttggcatcctagttttgacatctctacca  10870200
                                                                       --------->ALFIN1
                                                                      <-------MYC3
                                                                      ------->MYC3
                                                                      ------->PIF5
                                                                      <-------MYC2
                                                                      ------->MYC2
    ---------->DOF2                                                   <-------MYC4
 ------>MYB83                                                         ------->MYC4
 ------>MYB46(1)             --------->ANAC58                         <-------PIF5                 -
-->MYB83                     --------->ANAC46                        <---------bZIP60(2)          <-
-->MYB46(1)                  --------->ANAC58                        <---------TGA1a           <----
----MYB46(2)             --------->YAB1                              --------->TGA1a           -----
--->AtMYB61          --------->ZAT6                     <-------TEIL --------->PIF3(3)      <-------
----MYB111(2)    --------->ANAC58                 --------->MYB52(1) --------->ANAC46       --------
----MYB59        --------->ANAC46            <----------ID1          <---------PIF3(3)      <-------
----MYB111(1)    --------->ANAC58            --------->ANAC58        <---------O2           <-------
--->MYB46(3)  <---------REM1(2)              --------->ANAC58        --------->O2           --------
-->ANAC46--------->GLK1(1)   <----------ID1  --------->ANAC46      <---------ALFIN1     <-----------HVH21
 
aacccactaaagaaatctacacggacactaataagccaaatcagcaatacgacaaacggtccatattccaccacgtggctctcttatagttcgtcacgtc  10870300
----->NtERF2
--------ALFIN1
-----ETT(2)                           --------->At4g35610
---->ETT(2)                      --------->ZAT6
--ANAC46                     --------->LBD16
->O2                        <---------HSFB2a(2)                    --------->LBD16               ---
--TGA1a                     --------->ANAC46           --------->DAG2                         ------
--O2                        --------->HSFB2a(2)       ---------->DOF2                         ------
->TGA1a <-----------GT1    <---------LBD16         ------>ZmHOX2a(2)          --------->TOE2(3) <---
 
gacacctattaataccgttctaaattcttctccggaacagtagctaaaccgtgatcgtaaagctagtctccagagaagaaaccacaatcggagtctgaag  10870400
                         ------>ZmHOX2a(2)
                        --------->GLK1(1)
                        <------ZmHOX2a(2)                ---------->DOF2                  <---------ANAC58
                       <---------AGP1               <---------------AGL15                 <---------ANAC58
    <---------ICU4     --------->ARR11(3)           --------------->AGL15                 <---------ANAC46
   <---------ATHB51    --------->AGP1              <---------ANAC46                    <---------MYB52(1)
-------->RAV1(1)       <---------ARR11(3)          <---------ANAC58             --------->ZAT6
--->ANAC58             --------->ARR14(2)          <---------ANAC58         <---------ANAC58
--->ANAC58             <---------ARR14(2)    <---------ANAC58               <---------ANAC58      --
-------ID1            <---------CCA1(2)      <---------ANAC58               <---------ANAC46      ==
 
caacaaattatgcctaatgtttctcagatctctactgttctacgtctagcgttttcttgtaaaagaagactctccaatggcttacacttcgttgctcgtt  10870500
                           <-----------HVH21
                          --------->YAB1
                          --------->AtMYB61--------->ARR14(2)
                          ------->GAMYB    --------->GLK1(2)
                         --------->MYB46(3)<---------ARR11(3)
                        -------->P         <---------ARR14(2)
                      --------->MYB46(3)  <---------GLK1(2)
             ------>ZmHOX2a(2)         --------->YAB1                                              -
           --------->ARR14(2)          --------->HSFB2a(2)                                         <
           <---------ARR14(2)<-----------RAV1(2)                                         <---------DAG2
   <---------ALFIN1 --------->ANAC46<----------DOF2                                      <----------DOF2
---->ZmHOX2a(1)------>ZmHOX2a(1)  <-------TEIL                                  <-----------RAV1(1)<
====================HOX2a_HOX2a <---------MYB52(1)                       <---------TOE2(3)      ----
 
cctattccacctctgatcctcccaaacaaccatcaggtactttcagaatcttcaattcgttgagaattatgcaattgagattaatgtcgctcctttatca  10870600
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AGI:  At2g25530.1   
Description:  AFG1-like ATPase family protein. similar to AFG1-like ATPase family protein [Arabidopsis thaliana] (TAIR:AT4G28070.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO44214.1); similar to putative AFG1-like ATPase [Oryza sativa (japonica cultivar-group)] (GB:AAO20064.1); similar to Os03g0851900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051919.1); contains InterPro domain AFG1-like ATPase (InterPro:IPR005654)
Range:  from: 10870137    to: 10873835    Orientation: Forward
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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