Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                     <---------TOE2(3)                              <---------ICU4                              --------->YAB1                              <--------HAHB4                                              ------->GAMYB                              --------->ATHB51                                           --------->MYB46(3)                             --------->ICU4                                              <---------MYB52(2)                             --------->AHL20(2)      --------->ARR11(3)                  <---------MYB55(2)                  --------------->AGL15      <---------O2           --------->ARR14(2) ----------->RAV1(1)                  <---------------AGL15      <---------ANAC55(2)    <---------ARR14(2)<----------ID1   --------->TOE2(3) ---------->DOF2         <---------ANAC46 <------ZmHOX2a(1)----------->RAV1(1)   ttaaacatcaaattgattatctaaaaagagaataattaagaaaactcacgtagaagacattgaaggagaggttccatgggccaacaatgcaacaaacgcg  10842200                                    --------->ANAC58                    <---------ANAC46--------->ANAC58       ----------->GT1          ------>ZmHOX2a(1)       ---------->DOF2        <---------TOE1(2)               <----------ID1   ttcgaactcttcctcccattctacgtggtttgagcctaaagcaatcggtttagagctcgtatggttaaccggtcgattagaacgatagaatgggacgaag  10842300                                                    --------->HSFB2a(1)                                              <---------ANAC46   <---------ANAC58                   <-----------HVH21         <---------LBD16----------->RAV1(2)             ----------->HVH21           --------->AtMYB61  <---------ANAC58           --------->LBD16               <---------ALFIN1<----------DOF2         <---------LBD16                --------->MYB46(3)  <---------ANAC58                       --       <---------ARR14(2)             <---------ALFIN1 <-------TEIL<---------MYB52(1)              --       --------->ARR14(2)          --------->AtMYB61<---------HSFB2a(1)                --------->LBD16   ----------------->AGL1       <-----------GT1    --------->DAG2<---------ANAC58      ----------->GT1   ----------------->AG       <-----------HVH21--------->LBD16------>ZmHOX2a(1)      <---------LBD16   cccaatccaaaaccggagacaggtcccttccatttcacctccaccatcgcggaaaggttctttcctgccgtttcatcaccgagaatagccggtaaaccat  10842400                           --------->HSFC1(2)                           --------->HSFB2a(1)                       ----------->HVH21                      ------->MYC3                      <-------MYC3                     --------->ANAC55(2)                     --------->TGA1a                     <---------ANAC55(2)                     --------->O2                     <---------O2                     <---------TGA1a                     ===============================bZIP_DOF                     <---------ANAC46                   ------------->DYT1                   <-------------DYT1                  <---------MYB52(1)                 <-----------TGA1                 <-----------HVH21              <---------At5g28300           <----------DOF2 <---------At4g35610           ====================bZIP_DOF  <----------DOF2                                        <----       --------->DEAR3(1)  <---------HSFC1(2)                                    <---------TOE1(3)    <---------ALFIN1 ===============================bZIP_DOF                     <---------TOE2(3) ------->ANAC58 --------->DEAR3(1)<---------ALFIN1                  ------>ZmHOX2a(1)   <----------DOF2 ------->ANAC58 --------->ANAC46 ------>ZmHOX2a(1)       ---------->DOF2<---------MYB52(1)     <-----   caagcctcaccggcttcaccgtcacgtgaagcttcctcaccttctttgccatagatttcaaaagttattcctctgttttttttagggtttctttctctgt  10842500                                                                                    <---------MYB46(3)                                                                                    <------MYB46(1)                      <---------MYB52(1)                        ---------->DOF2 <-----------RAV1(1)                  ------>ZmHOX2a(1)      --------->ALFIN1    *TSS          --------->ICU4               <------------------------ANAC81         --------->ALFIN1 ----------->GT1   <---------- -----MYB52(1)<-----------GT1     <----------DOF2--------->AHL20(2)    <------NtERF2<------MYB83 -------------------ANAC81    ---------->ID1     <---------AHL20(2)  <---------DEAR3(1) <-----------TBP   ttttttttttggggtttttcctctgtttttttgtttcttttaggtgttgatataaatgtgtgactaaaaaggaggcgataatttgttggtttatatatag  10842600                                  <------------CBF                               --------->ANAC46                               --------->ANAC55(2)                               --------->ANAC58              <------ZmHOX2a(1)                        <---------CCA1(2)                  <---------TOE1(3)                      <---------ANAC58                     <---------TOE2(3)             ---------->DOF2                      <---------ANAC58               <---------TOE2(3)           ---------->DOF2    <---------AHL20(2)<---------ANAC46         --------------->AGL15          --------->AHL20(2)  --- ------->TEIL------->TEIL  --------->YAB1     <-----------------AGL2         --------->AHL20(2) <---- -TBP    <---------------AtSPL8--------->ANAC58<---------------AGL15       --------->TOE2(3)    -----   atgtatgtaaatgtgtacgtagaggcgtatcatacgcattgtatgtcttctaaataaggctaaggaaacgtagagaacattaaaaaagaatcaaagacag  10842700                                                                             --------->LBD16                                                                           <---------LBD16                                                                         <---------ARR14(2)                                                                        --------->GLK1(1)                                                                        <---------GLK1(1)                                                                     <---------At4g35610                                                                 --------->ANAC58                                                                 --------->ANAC46       <-----------GT1      --------->YAB1                       --------->ANAC58  ---------->DOF2           --------->AHL20(2)                 --------->MYB52(1) ------->DOF2   --------->ANAC46             ---------->DOF2--------->At4g35610                 ===== -----At4g35610 --------->ANAC58           ---------->DOF2  <---------At4g35610     <---------TOE2(3) ---->At4g35610 --------->ANAC58<---------ICU4          <-----------HVH21--------->ARR14(2)     -----   caaagaaagaaaccctccaagaaaacacaattaaaaatggccaaacaaagagcgacttggtcagcaaacgcagcaaatccgcgtttgaggctatcgataa  10842800                   ----------->HVH21                 --------->ALFIN1                       --------->O2                ------->MYC3                            <---------ANAC58                ------->MYC2                            --------->ANAC55(2)                <-------MYC2                            <---------ANAC46                <-------MYC3                            <---------ANAC58               --------->O2                             <---------O2               --------->TGA1a                       ----------->HVH21               <---------ANAC58                      ----------->TGA1               <---------ANAC58                    <---------At4g35610               <---------O2                        <---------ICU4               <---------ANAC46             ------>NtERF2                                 <-------TEIL               <---------TGA1a             --------->LBD16 ------->TEIL                  <<<<<<<<<<<<               <---------ANAC55(2)       <---------At4g35610         --------->ATHB12  <------MYB83               --------->ANAC55(2)       <---------LBD16<---------bZIP60(2)            <------MYB46(1)    --------->AHL20(2)                   --------->LBD16--------->TGA1a               --------->MYB46(2) ========================bZIP_DOF      <---------LBD16<---------TGA2(2)               --------->MYB59 ----->DOF2<-----------HVH21         --------->ARR14(2) <---------TGA1a               --------->MYB111(1)   aaggaattaaaaacatcacgtgtgactcacatggtctggtttccgcgggctaatgctgacgtgcctattactaattggatggatgagtttggtacattgg  10842900                                            --------->ANAC58                   <----------DOF2          <XXXXXXXXXXXXXXXXXXXXMIR413                        ------           --------->ANAC58                 --------->ANAC58                               <---------ICU4      --------->ANAC58                    <---------AtLEC2    <---------LBD16             <---------YAB1      --------->ANAC58               <----------DOF2 <---------ARR11(3)                 --------->YAB1 <<<<<LFY  --------->ANAC58          <---------DAG2  --------->ARR11(3) <-------TEIL <----------DOF2   tttaagacaagacaagcgaaactttctctgtctaaacaacttttgcaagacaagagaacttattttcggactggttcatctctactcctttcatcatttt  10843000                                                                    <---------LBD16                           >>>>>>>>>GT-1                           <---------ANAC46                        ----------->GT1                            <---------ANAC58                       --------->ICU4                        ---------->DOF2 <---------AHL20(2)                     --------->MYB52(1)                 --------->ICU4      <---------AHL20(1)                     <---------ICU4                  --------->AHL20(2)     --------->AHL20(2)                     --------->YAB1                  <---------AHL20(2)     --------->AHL20(1)      -                    <---------AHL20(2)               --------->ICU4<---------ANAC58                 -                    <---------ATHB51            ----------->GT1   <-------TEIL   --------->ATHB12<--- --->AHL20(2)----------->GT1           --------->AHL20(2)  <---------YAB1  --------->YAB1 <---------AHL20(2)   aaaatttgcttcaaattgttaaataatggttaatatttcaataaaacatttggaaaaaattatgaaagttcgtggaaatataatctttggatttattttc  10843100  Previous    Next  AGI:  At2g25460.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G04860.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN68625.1); contains InterPro domain C2 calcium-dependent membrane targeting (InterPro:IPR000008) Range:  from: 10839832    to: 10842561    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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