Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                   ----                                                                                                 ====                                               --------->AtLEC2                                 =====                                             <---------ANAC58                                   <----                                             <---------ANAC46                                   -----                                             <---------ANAC58                                  <-----               <------ZmHOX2a(2)          ------->GAMYB                                        ------      --------->CCA1(2)                  <<<<<<<<<TAC1                                         ------     --------->ARR11(3)                  <------------AtMYB77                             --------->TOE1(2)    <<<<<<<<<RAP2.2                     ------>MYB46(1)                               <------ZmHOX2a(1) --ANAC58     <-----------ARR10         ------>MYB83                                  =============== --ANAC46     <---------ARR14(2)       --------->MYB52(1)                             =============== --ANAC58     --------->ARR14(2)<---------At4g35610 ---------->DOF2                 --------->MYB59   gcatttagatatatcggatcagccctgctactcatgctgaccaactgtcttgcacaaagacaatagaaccgagtctagcattggattaggaacatgagat  10801800   --------->MYB52(1) -->ZmHOX2a(2) ========================HOX2a_HOX2a                                                       <---------ANAC58 ========================HOX2a_HOX2a                                                 --------->ARR11(3) --ZmHOX2a(2)                                                           <------ZmHOX2a(2)  <---------ANAC58 ---->CCA1(2)                                    <---------ATHB12     <------ZmHOX2a(1) <----------DOF2 ----ARR11(3)                                  ------>MYB46(1)      <---------TOE2(3)<---------ARR11(3) --->ARR11(3)                                  ------>MYB83   >>>>>>>>>>GT-3b       <------MYB46(1) --->AGP1--------->GLK1(2)                <-----------GT1  ----------->GT1          <------MYB83 ===HOX2a_HOX2a                 <---------AHL20(2)         --------->ANAC58        --------->MYB59 ==HOX2a_HOX2a    <------ZmHOX2a(1)    --------->ARR14(2)  --------->ANAC58   <---------YAB1       <-   ctaaaaaacagaatcaagtaggagatgtctatatataaacagatttaccaaatgaattgacaagaaaaataaggatcaatgtgattaggtctttcttgaa  10801900                                                                                    <---------ANAC55(2)                                                                                    --------->ANAC55(2)              --------->AHL20(2)                                                <-----------HVH21        --------->AHL20(2)                                                     --------->bZIP60(2)        --------->YAB1                                                 <---------ANAC58 --------->ANAC58        <---------AHL20(2)                                             <---------ANAC58 --------->ANAC58    <---------ICU4                               ----------->GT1       <---------ANAC46 --------->ANAC46   <---------YAB1<------------CBF            --------->DAG2 <---------ANAC58   --------->ANAC46 --------->YAB1<---------AHL20(2)           ---------->DOF2 <---------ANAC58  ------->MYC3 ----------GT1<---------AHL20(2)        <---------YAB1   --------->TOE1(2)    <-------MYC3        ---   ttttcatcatttatatttaaattgggaagtcatggtaatcttatggtaaagcagaaaaatgtgcgagtctatggcttacacatgtcacataagcaaaaaa  10802000                                                                                            <-------TEIL                                                                                           --------->ARR14(1)                                                                                           --------->CCA1(2)                                                                                          --------->ARR11(1)                                                              <---------MYB46(3)          <---------ARR14(2)                                                <---------LBD16  <-------TEIL    <-----------------AGL3                                    <---------GLK1(1)        <---------------AtSPL8     ----------->ARR10      --------->YAB1     ----------->GT1 ------>ZmHOX2a(1)   <---------AtMYB61 <-----------GT1------- ------>AHL20(2)    <-----------TBP --------->GLK1(1)     <---------AtMYB61<---------YAB1 --------->ARR14(2)   taaaacaaacataaaaactggaatttgtagttaaaatgaaatccttctacttcggaatttgtggtggtacatagcttaatattactatattagatacgct  10802100                          <---------AHL20(2)                          ----------->TBP                        ----------->TBP                       <---------AHL20(2)                  <---------MYB52(1)                    <---------AHL20(2)                 --------->TOE2(3)                  ----------->GT1                --------->ANAC46<---------At4g35610 <------MYB46(1)        --------->CCA1(2) --------->AHL20(2)        <------MYB83     <-----------GT1    <------ZmHOX2a(1) --------->AHL20(2)      <---------ZAT14<-----------GT1           ------------>CBF ---->GT1<-------TEIL<---------YAB1--------->At4g35610  --------->AHL20(2)    ---------->DOF2   taaataggagatacatctacgttattatatatatagctgctacatgcctacagtaggtttaattatctattttacatttttaaagcactaccaattcatt  10802200                                                                      <------MYB83                                                                      <------MYB46(1)                                                                      <---------ANAC46                                                                      <---------ANAC55(2)                                                                     --------->MYB46(2)                                                                     --------->MYB59                                                                 <---------ZAT6                                                             <---------ANAC58                                                             <---------ANAC58   <---------AHL20(2) <-                                                      <-----------GT1--------->MYB111(1)<---------YAB1                                                 --------->ARR11(3) <---------MYB55(1)  <---------AHL20(2)                                         --------->ICU4<---------At5g28300      <-----------GT1 <----                                   --------->SPL7<---------ARR11(3)<---------MYB52(1) --------->YAB1- <---------YAB1              ------->GAMYB  <---------YAB1 <---------MYB52(1)------->TEIL       -----   tctattatcgacgatgaagaaatactttcaaccctcgttcgtcattttgattatcttcaccgttcttgtgttaggtatgtatttacatttataattgttt  10802300                                                                                           <---------                                                             <---------AHL20(2)           --------->YAB1                                                             --------->AHL20(2)          <---------YAB1                                                          ----------->GT1             <---------YAB1                                                         ----------->GT1              <---------AHL20(2)                                                        --------->DAG2                --------->AHL20(2)                                                >>>>>>>>>>WRKY43                   --------->AHL20(1)                                                >>>>>>>>>>WRKY38                   <---------ARR11(3)                                                <---------WRKY18(1)                --------->ARR11(3)                                                >>>>>>>>>>WRKY26                   <---------AHL20(2)         --------->YAB1              --------->YAB1    ---------->DOF2             --------->AHL20(2) <---------AHL20(2)             <----------DOF2 >>>>>>>>>>WRKY6                    <---------AHL20(1) --------YAB1                   <---------DAG2  >>>>>>>>>>WRKY11               <---------AHL20(2) -----AHL20(2)               <-----------GT1   --------->WRKY38(1)            --------->AHL20(2) ---- -------->YAB1      --------->HSFB2a(2)        --------->WRKY12               <---------AHL20(2)<---- ---->AHL20(2)      <---------HSFB2a(2)        --------->WRKY45           <---------AHL20(2)   ------   tattatatcacccataatcgttgtagaaattttactttataaaaactagttgaccaaaaaagtttaaatagcatattgaatttaatatattattatcaac  10802400                                   <-----------GT1                                --------------->AtSPL8                               <----------DOF2 --GT1                       ------>ZmHOX2a(1) --->GAMYB               <---------ARR14(2) -----MYB52(2)           --------->ARR14(2)                         <----------DOF2 --->At4g35610      <-----------HVH21         <---------WOX13(1)    <---------DAG2   tcacctatgctatacaaatttgtgtcaaatcctctttgtacaatatagattgccatagtatcaagtttagctttttctatgtcttaatacataccatagc  10802500                            <---------AHL20(2)                        --------->ATHB51                        <--------HAHB4                        <---------ICU4                        -------->ATHB1                        <---------AHL20(2)                       --------->ICU4                       <---------ATHB51                       <---------YAB1                     <--------ATHB1                     <--------HAHB4                     --------->ATHB51                     --------->YAB1                     <---------ICU4                    --------->AHL20(2)              ---------->DOF2                    <---------ATHB12               <---------MYB52(1)               ------>ZmHOX2a(2)                  --------->LBD16               ===================================HOX2a_HOX2a              <------ZmHOX2a(2)                  --------->ANAC55(2)              ====================================HOX2a_HOX2a             --------->ARR14(2)                  <---------ANAC58             <---------ARR14(2)                  <---------ANAC58        --------->MYB52(1)<---------YAB1         <---------ANAC55(2)      <---------MYB52(2)-------->HAHB4           <---------ANAC46      --------->MYB46(3)--------->YAB1     ------>ZmHOX2a(1)     >>>>>>>>>MYB98 <---------ATHB51     <-----------------AGL1 --------->TOE1(3)  --------->ICU4  <---------GLK1(2)--------->DAG2                   --------->ANAC46   tatccctaacaaacggatcccaataattattattttcagaatttcctgattccgtaaagttctatggtcttaacgcttaacacattatacagaactattg  10802600                                                                             --------->AHL20(2)               --------->YAB1                                                <---------AHL20(2)           --------->AHL20(2)                                   --------->ANAC46        --------->ATHB12                 --------->YAB1        --------->LBD16       --------->ICU4                  <-----------GT1    <----------DOF2--------->AHL20(2)   tgacatgaattgattaaacatacttctattgattctagttttttcatcaccaattcttctctttccgcgctgcatatatataaatgtttcaaaatacagt  10802700  Previous    Next  AGI:  At2g25344.1    Description:  LCR14 (Low-molecular-weight cysteine-rich 14). Identical to Putative low-molecular-weight cysteine-rich protein LCR14 precursor (LCR14) [Arabidopsis Thaliana] (GB:P82729); similar to LCR5 (Low-molecular-weight cysteine-rich 5) [Arabidopsis thaliana] (TAIR:AT2G28355.1); similar to pollen coat protein class A no. 2 precursor [Brassica napus] (GB:AAK82951.1); contains InterPro domain S locus-related glycoprotein 1 binding pollen coat (InterPro:IPR010851) Range:  from: 10802214    to: 10803118    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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