Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                            ------>ZmHOX2a(1)                                                           --------->ATHB12              ------------                                                           -------->ATHB1                <-----------  <---------WOX13(1)                                       <---------ICU4               ------------- -------->ATHB12              --------->YAB1               --------->YAB1               ------------- --------YAB1               --------->GLK1(2)             --------->ICU4                ------------- ------->ICU4           --------->ANAC46                  <---------YAB1             <------MYB83 ->MYB52(1)    ------>ZmHOX2a(2)                      -------->P                     <------MYB46(1) >MYB55(1)   <---------ARR11(3)                    <---------ANAC58                 --------->MYB59 -->HVH21    --------->ARR11(3)      --------->YAB1<---------ANAC58               --------->ICU4   catgattgaaacattgatctccaaacacagaatcagtattcagaacaaaacttacttaccatcattgtgttcaatctcatagtaattaggtcctaaatta  10494300                                                                 --------->ANAC46            <-------                                                                 --------->RAP2.6(2)   <------NtERF2                                                          <---------ICU4               <---------MYB52(1)                                                          --------->ATHB12            <---------RAP2.6(3)                                                          --------->YAB1              <-----------HVH21                                                         <---------ATHB12            --------->RAP2.3(2)                        <---------CCA1(2)                --------->ICU4              --------->RAP2.3(3) --->AGL15          ----------->RAV1(1)            --------->ANAC58                <---------ZAT2 ----AGL15    <<<<<<<<<SARD1      <----------ID1   --------->ANAC58 --------->AtMYB61--------->ATERF1(2) ---->AGL3    <<<<<<<<<CBP60g  --------->DAG2   --------->ARR14(2)----------->RAV1(1)<---------ATERF1(2) ---->AGL2   ------>MYB46(1)  ---------->DOF2   <---------ARR14(2)------>NtERF2    --------->ZAT2 ---->AGL1   ------>MYB83  >>>>>>>>>RAP2.2 --------->DEAR3(1)   --------->MYB46(3)--------->ANAC46   gaaacatggaacaccaaatttccaacatatctaaaagcgacaacatcgccgatacgaaaatcattagccaccacaaactcttcccagccgtcagtgattc  10494400                                                          --------->HSFC1(2)                                                          --------->HSFB2a(1)                                                          <---------HSFC1(2)                                                --------->ZAT2                                  ---------->DOF2     ----------->HVH21  <------ZmHOX2a(2)     <---------ARR14(2)      <---------ZAT2 <-----------HVH21      <---------ARR11(3)      --------->At4g35610      --------->ARR14(2)  <------- --GLK1(2)              --------->ARR14(2)      <---------At4g35610 <---------------------WRI1  <----   tccgatcagacaacttcacttcccaagatttgtctgaaaagtccaatttcagctctgcgacgcttcttccttcgatatactctgagaagaagtcttcagg  10494500                                                                                           --------->ALFIN1          ----------->RAV1(1)                                                            --------->ALFIN1      --------->REM1(1)                                                 ------------>MYB.PH3(2)  ----  --------->At4g35610                   <---------ARR11(3)  ----------->RAV1(1)        <---------ANAC58 --LBD16 --------->MYB46(3)             --------->ARR11(3) <---------ETT(1)            <---------ANAC58 --ZmHOX2a(1)                           --------->GLK1(2)  --------->ANAC46   <-----------GT1   <----   aatcatctacaacaacacaaaaacaacaatgaaacagaagaaaatctttgaataagctaatccgacagaacaagagatagttaccaagtgagtgtggaag  10494600                                                                                                   --                                                                                                   --                                                                                                   --                       <---------ANAC46                                                            <-                       <---------ANAC58                                                            --          --------->ALFIN1                             <---------------AtSPL8                     ---        --------->ALFIN1--------->LBD16         --------->YAB1                                    --- <------ZmHOX2a(1)     <---------ANAC58  --------->ANAC46          <----------ID1                <--- ----->TOE1(2)        <---------LBD16 --------->ARR14(2)     ----------->GT1                 <------- -----ZAT2<---------ANAC46       --------->TOE2(3)     >>>>>>>>>TBF1     ------------>CBF <----------   ctaggaacaagtgtgtggaagaattgcggataaatccttgaattcgccattgatgaagaagaacagaaaaaaacaaacaatcccttgaaaattttctttt  10494700      ------>MYB83    <---------MYB59   ====================================MADS_MADS   ----------------->AGL3  ------->TEIL ------->ANAC58 ------->ANAC46 ------->ANAC55(2) --------ANAC55(2) ------->ANAC58                                           <---------MYB46(3)               <---------GLK1(2) ------------>AtSPL3                    ----------->GT1 <---------ANAC58             <---------HSFC1(2) ------------>AtSPL8                 <------------CBF   <---------ANAC58             <---------HSFB2a(1) --------GT1           --------------->AGL15       <-------TEIL                      --------->HSFB2a(1) ---DOF2               <---------------AGL15  <---------AHL20(2)                   <---------GLK1(2) -GT1 ------>MYB46(1) <-----------------AGL2  --------->AHL20(2)              <------------CBF<------   cacgtaccaaattttgttttgttttctattttgagcacaaattggtaaataaatgcatgcttgttgaaattaacacagaaaattggaatctccgattatc  10494800                                         --------->ARR14(2)                                     ---------->DOF2                                 --------->YAB1                              ------>MYB46(1)                                                   -----                              ------>MYB83<---------GLK1(1)                                    ------                            --------->AtMYB61         ----------->HVH21                        <-----    <---------ANAC58        <---------MYB59    <---------ALFIN1 <------------CBF               ------    <---------ANAC58    <---------ETT(1) <---------GLK1(2)    --------->AHL20(2)               <----- ---ARR11(3) <---------MYB52(1)  ----------->GT1 <---------CCA1(2)          <-----------TBP  --------   tctctgtcttgctccgttttcattttccgaccaaatcgtaaaagattccccatctcttgacagataaattgggcctggatatataacatatgggctagat  10494900                                                                       --------->ZAT14       --------->AHL20(2)                                              <---------ZAT18       <---------AHL20(2)                                              <---------ZAT14      <---------ATHB12                                                 --------->ZAT18  ------------>CBF                                                  <---------ANAC58 ---->CCA1(2)                                                       <---------ANAC58 --->ARR11(1)                                      <----------DOF2  <---------ANAC46 ----GLK1(2)                     --------->At4g35610         <-------TEIL  ---------->DOF2 --->ARR14(2)                    <---------At4g35610        --------->CCA1(2) ----ARR14(2)          <---------ANAC58 <---------ARR11(3) --------->ARR14(2)     <---------MYB59   - --->ARR10             <---------ANAC58 --------->ARR11(3) <---------ARR14(2)    ----------------->AGL1   ttgggccaataaaatccacaaatttgggtatggtatgctgaagacattctcaactttgccagatacaatggcgtgcacaaagtaccaaaatggaacaata  10495000                                             <----------ID1                    <-----------GT1       --------->MYB52(1)                                        -                 <---------AHL20(1)     <---------MYB52(2)                                      <----           --------->ANAC58          <------ZmHOX2a(1)              --------->ANAC58   --------->ANAC58           --------->ANAC58        <---------ANAC55(2)              --------->ANAC58   --------->ANAC58 ------>TEIL     <---------ARR11(3)<---------TOE2(3)                --------->ANAC46   --------->ANAC46   tggatgtctcagtaagcaatatataccctaagaaattaaggaactaagggacaaactacaaacttacaataagccaactacaaacttatacgcctaggcc  10495100                                                                                            ------->GAMYB                                                                                          <---------TOE2(3)                                                                                <---------------AtSPL8                                                                                --------------->AtSPL8         <-----------HVH21                                                     <---------ANAC46        --------->ANAC46                                                     --------->ARR11(3)      <---------AtLEC2                                   --------->ARR11(3)  ------->TEIL<---------DOF5.7(2)    <-----------GT1                                      <---------ARR11(3) <---------CCA1(2)      -- <---------ICU4            <---------TOE2(3)       ---------->DOF2   --------->LBD16     --------->MYB52(1) -------->ICU4            <-----------GT1      <---------HSFB2a(2) <---------LBD16     --------->DOF5.7(2) -----MYB59          <---------YAB1            --------->HSFB2a(2)--------->MYB52(1)  --------->TOE2(3)   taatttttacatgtcatctatttctaattaacatttttgtgtttagtctctcgaaaagagaacttaagtaccggagttgtatcttgtacattaacgaact  10495200  Previous    Next  AGI:  At2g24650.1    Description:  transcriptional factor B3 family protein. similar to MEE45 (maternal effect embryo arrest 45), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT4G00260.1); similar to reproductive meristem gene 1 [Brassica oleracea var. botrytis] (GB:AAC18082.1); contains InterPro domain Transcriptional factor B3; (InterPro:IPR003340) Range:  from: 10487807    to: 10494650    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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