Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                  ------->GAMYB                   --------->ANAC55(2)                          --------->TOE2(3)                   <---------ANAC55(2)                          --------->TOE1(3)                 --------->AHL20(2)                           -------->P         <------ZmHOX2a(1)           <---------ATHB12        ------->GAMYB       <---------TOE2(3)           --------->WOX13(1)       <---------MYB111(2)  <---------ARR11(3)        --------->DAG2                  <---------MYB55(2)  --------->ARR11(3)       ---------->DOF2 ---------->ID1   --------->MYB46(3)  --------------->AtSPL8   tcaagagcttaggattcaattacataacataaagtatcaatctttgtccatattcaaattcaacaaccctaaaaattcaaactttgtacaaaattcgatt  10235300                                                                                                 ----                                                                                           <---------ANAC46                                                                                     ----------------                                                                                     ----------------                                                                                     <---------------                                                                                   <-----------GT1---                       ------>ZmHOX2a(1)                                        ------->TEIL    -----                   --------->ARR14(2)                                   <-----------GT1  <---------WRKY18(1)                   <---------ARR14(2)                               <---------ARR11(3)  ----------->HVH21              --------->GLK1(2)                                     --------->ARR11(3)--------->TOE2(3)              ------->TEIL                                          --------->ARR14(2)---------------              --------->ARR14(2)                 ------>MYB46(1)    <---------ARR14(2)--------->TOE1(3)              <---------ARR14(2)                 ------>MYB83      <------ZmHOX2a(1)<---------At5g28300   caaaatcatggaaacgaatccaatcctcgtttaaactcgaattgcgaaaccaaattgaagagaaacagaggatttttcaatgtatttaccttgacgggaa  10235400                                                                                           ------>NtERF2                                                                                           --------->LBD16                                                                                          --------->DEAR3(1)                                                                                         <---------LBD16                                                                                        --------->ABI4(1)                                                                                        ------>NtERF2                                                                                       --------->DEAR3(1)                                                                                       --------->DREB2C(2)                                                                                       ------->GAMYB                                                                                      <------NtERF2                                                                                      --------->MYB46(3)                                                                                      --------->DEAR4(2)                                                                                      --------->DEAR3(2)                                                                                      --------->ATERF1(1)                                                                                     --------->ABI4(1)                                                                                     ------>NtERF2                                                                                     <---------ATERF1(1)                                                                                    --------->AtMYB61                                                                                    <---------ALFIN1                                                                                    --------->DEAR3(1)                                                                                   <------NtERF2                                                                                   <---------ABI4(2)                                                                                   --------->MYB46(3)                                                                                   --------->ATERF1(1)                                                                                   --------->ERF1                 <------NtERF2                                                    --------->ABI4(1)                <---------RAP2.6(3)                                               ------>NtERF2                ------>NtERF2                                                     <---------ATERF1(1)                <<<<<<<<<<<<<<<<<LFY                                              <-----------HVH21               >>>>>>>>>AtERF-1                                                  --------->RRTF1(3)               >>>>>>>>>AtERF-2                                                  --------->RAP2.6(2)               --------->DREB2C(2)                                               --------->ATERF1(2)               >>>>>>>>>AtERF-3                                                  <---------ATERF1(2)               --------->RAP2.3(2)                                               --------->ANAC58               --------->RAP2.6(2)                                               --------->ANAC46               --------->ATERF1(2)                                               --------->ANAC58               --------->DEAR3(1)                                                --------->DEAR3(1)               --------->RAP2.3(3)                                               --------->RAP2.3(2)               --------->RRTF1(2)                                                --------->RRTF1(2)               >>>>>>>>>AtERF-4                                                  --------->DREB2C(2)               >>>>>>>>>AtERF-5                                                  --------->RAP2.3(3)               >>>>>>>>>AtERF-7                                                 --------->DEAR4(2)               --------->RRTF1(3)                                               --------->RRTF1(1)               --------->ANAC58                                                 --------->RAP2.6(1)               --------->ANAC58                                                 --------->ERF1               --------->ANAC46                                                 --------->ATERF1(1)              --------->RRTF1(1)                                                --------->RAP2.3(1)              --------->ATERF1(1)                                               --------->ORA47(2)              --------->ERF1                                                    <------NtERF2              --------->RAP2.3(1)                                              <---------ATERF1(1)              --------->ORA47(2)                                               <---------DREB2C(1)              --------->DEAR3(2)                                               ------>NtERF2              <------NtERF2  ======================HOX2a_HOX2a                 --------->ABI4(1)             <---------RAP2.3(1)                                               --------->DREB2C(1)             <---------At4g35610                                               <---------RAP2.3(1)             --------->At4g35610                                               <---------At4g35610   --------->GLK1(1)         ================HOX2a_HOX2a                       --------->At4g35610 ----->DAG2  --------->ABI4(2)              <------ZmHOX2a(1)                 <---------ATERF1(2) ->AGL1      <---------ATERF1(1)          --------->ALFIN1     ---------->DOF2--------->ANAC46 ->AG        ------>NtERF2   <------ZmHOX2a(2)              --------->ANAC58  --------->DEAR3(1) --AGL1      --------->ZAT2 --------->ARR11(3)    --------->DAG2              --------->ATERF1(2) ------>DAG2<---------ARR14(2)        <------ZmHOX2a(1)     --------->ANAC58 <---------RAP2.6(2) ----->DOF2 --------->ARR14(2)  ---------->DOF2  ---------->DOF2           <-----------RAV1(1) >AGL15 <---------LBD16     <---------ARR11(3)--------->At4g35610       <----------DOF2<---------ALFIN1   aaggggtttcttcggagccgccattggtaagatcaaaagaggaagaggagctaaagcgagggacgaaaagcctgcttttgccgccgccaccgccgggtct  10235500                         <---------REM1(1)                                      --------->DAG2                         <-----------RAV1(1)                                   ---------->DOF2                         <---------MYB46(3)                       <------ZmHOX2a(1)                 -             <---------MYB46(3)                      ---------->ID1       --------->YAB1           <-           <---------MYB52(1)          <---------GLK1(2)    --------->YAB1--------->AHL20(2)    -----   caaactcaaaaccgatggttcaccttgttgttgcattactcgattctcttgttttttcgcaattagaaggattcaataaaaaaaagttttgcagatagat  10235600                                                                                                <----                                                                                              <------                                              --------->AHL20(2)                           <---------                                           ----------->GT1                                 <---------ANAC46         <---------ANAC46                 ----------->GT1                              <---------ZAT14         ----------->GT1            --------->ALFIN1                                   --------->ZAT14 ---------->GT1                  <---------DREB2C(2)                              <---------ZAT2<---- --------TOE2(3)              ----------->HVH21                 <---------DAG2    <---------At4g35610 ---->CCA1(2)  <---------AHL20(2)<---------DEAR3(1)             <----------DOF2   --------->At4g35610   agaggtatatagtgtatatatatgtgtctgtattgacggtggagaagataaaatcacttcgattccctttttttttttggctgaagctgtgttctgtggt  10235700                                                                                  <------------CBF                                                                                 --------->ATHB12                          ------->MYC3                                           <---------AHL20(2)                          <-------MYC3                                      --------->AHL20(1)                          <-------MYC2 ----------->GT1                      --------->AHL20(2)                         <---------TGA1a                                    <---------AHL20(2)                         <---------ANAC46                             <---------AHL20(1)                         --------->O2  <---------ZAT6   --------->GLK1(2)   <---------AHL20(1)                         --------->ANAC55(2)         <---------ARR11(3)    --------->AHL20(2)           ========================bZIP_DOF     <---------ANAC55(2)   --------->AHL20(2)---------->DOF2       <-----------GT1   --------->TGA1a--------->TOE2(3)  <---------ANAC46<---------AHL20(2) -----ANAC58             <---------O2<------------CBF--------->AHL20(1) --------->AHL20(2) ---MYB46(3)      *TSS   <---------ANAC55(2)    <---------YAB1    --------->YAB1<---------AHL20(2) --RAV1(1) <----------DOF2------->MYC2<---------YAB1 --------->ARR11(3)--------->AHL20(2)          -- -----ANAC58     <<<<<<<<<TBF1     <---------YAB1    <---------AHL20(1)<---------AHL20(2)    <-------   ttgccctaatttccttttcttcttctcacgtgtaaatgttattgttaattacgaaaatattctgtatatcaaaataattttatttattgaaaaagaattg  10235800           --------->ANAC58           --------->ANAC55(2)                                                                ------>ZmHOX2a(1)           --------->ANAC58                       --------->YAB1                          <---------ARR14(2)        --------->TOE1(2)                        <---------YAB1                      ---------->DOF2     --------->ARR11(3)                       <---------YAB1                 <---------AHL20(2)     --------->GLK1(2)                        --------->ICU4                 --------->AHL20(1)     <---------ARR11(3)   <---------YAB1    <---------ICU4                   --------->AHL20(2) --------->GT1   ---------->DOF2            <--------HAHB4             --------->ANAC46   --------->ARR14(2) -----CBF  --------->ANAC46                 --------->YAB1        <----------DOF2<-----------GT1   atggaaaaatcttacgaaataaagacttaatattgtttttaatgcatcattatcaaaatacaagtctactttcacagaattaattaccaaagtatcctct  10235900                                                    <---------ARR11(3)                                        --------->ATHB12                                        --------->ATHB51                                        <---------ICU4                        <---------AHL20(2)          <-----------ARR10                 --------->ATHB12                       <---------AHL20(2)           --------->ARR11(3)                <---------ICU4                       --------->AHL20(2)      ----------->GT1              --------->AHL20(1)                       <---------AHL20(1) <---------WOX13(1)                <---------AHL20(2)                    <---------ICU4      -------->HAHB4                     <---------AHL20(2)                   <---------AHL20(2)   <--------ATHB1                     --------->ATHB51                   --------->ICU4      <---------ATHB51                    <---------ICU4                   --------->AHL20(2)  <---------AHL20(2)                  --------->AHL20(2)                   <---------ATHB51    --------->ICU4                     --------->ICU4                  <---------AHL20(1)   <---------YAB1                     <---------YAB1        <----          ----------->RAV1(1)          --------->AHL20(2)               <---------ICU4<---------AHL20(2)   --------->YAB1 --------->AHL20(2) --------->YAB1 --------->GLK1(2)  --------->ICU4--------->ICU4 -   gtctataatctccaacacaaaataattaatttttgggaaaaataattgatggaaaatcttatgaaatgaagacataattattttgtatttattgcatcac  10236000             <----------DOF2          <---------ARR11(3)          --------->GLK1(2)        <---------MYB46(3)            --------->MYB46(2)         --------->RVE1(1)      --------->ALFIN1                 ----------->GT1      --------->YAB1     <---------YAB1             <---------ANAC58     --------->AHL20(2) --------->TOE2(3)           <---------AtLEC2         <---------ICU4   --------->YAB1      --------->ATHB12  <---------ANAC58        --------->MYB59 --------->AHL20(2)    <---------ICU4    <---------AtLEC2      <---------MYB52(1) <---------AHL20(2)    <--------HAHB4    <---------ANAC58     ------------>MYB.PH3(2) -----YAB1--------->ARR11(3)---------->DOF2         <---------ANAC58<---------AHL20(2)<---------CCA1(2) -------->YAB1 <-----------RAV1(1) <XXXXXXXXXXXXXXXXXXXXMIR171B/C--------->MYB52(2)--------->TOE2(3)<   tataaaaataaaaatctttgttgcatcattaaaagtgttgttggcatggctcttgcatgagttaagttagttaattcaaagattacctctatctataagt  10236100                                                                  <---------AHL20(2)              ------>ZmHOX2a(1)                                   <---------ICU4                 ----             --------->TOE2(3)                                   --------->AHL20(2)       <---------YAB1   <---------YAB1                                              --------->YAB1            <---------AHL20(2) --------->AHL20(2)      ------->TEIL                         <---------YAB1<------MYB46(1)     ----- <---------AHL20(2)   <---------YAB1              <-------TEIL--------->ICU4----------->GT1<---------ICU4 ---------AHL20(2) --------->ICU4 --------->AHL20(2)        --------->YAB1  <------MYB83--------->YAB1   tatttatttttgtttcctaaaattatgaatttttaagtaaatttgacaaatatacatatgtataataataaatatagttggtttattagattataatttc  10236200  Previous    Next  AGI:  At2g24050.1    Description:  MIF4G domain-containing protein / MA3 domain-containing protein. similar to eukaryotic translation initiation factor 4F, putative / eIF-4F, putative [Arabidopsis thaliana] (TAIR:AT5G57870.2); similar to eukaryotic translation initiation factor 4F, putative / eIF-4F, putative [Arabidopsis thaliana] (TAIR:AT5G57870.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN70546.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66650.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44357.1); contains InterPro domain Initiation factor eIF-4 gamma, MA3 (InterPro:IPR003891); contains InterPro domain Armadillo-type fold; Range:  from: 10232305    to: 10235718    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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