Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                          >>>>>>>>>ARR2                       --------->ATHB12                      <---------YAB1                   --------->TOE2(3)                 -------->P                 ------>MYB46(1)                 ------>MYB83               <---------MYB111(2)               --------->MYB46(3)               XXXXXXXXXXXXXXXXXXXX>MIR839            <-----------GT1               <---------MYB111(1)               <----------DOF2               <---------MYB59                 <---------YAB1               <---------MYB46(2)             --------->ARR11(3)                                <----             ------->TEIL<---------WOX13(1)   <---------ARR11(3)                                -----            <-----------GT1                 <---------YAB1  --------->AtMYB61                  ------         <---------------AtSPL8           <------------------------ANAC81                      ------         --------------->AtSPL8          <---------YAB1  <---------ALFIN1                    <-------   aaaaccaatgtaatgtaccaacctttgattgtccatcttcactgttattatctttgtttccacctccaaataatccattcactcgaagagacctgtaacc  10226000                                                         --------->LBD16                                                       <---------LBD16                                                       ----------->RAV1(2)                                                     --------->ARR14(2)                                                     <---------ARR14(2)                                                    --------->GLK1(1)       <---------------AtSPL3                       <---------GLK1(1) -----------AGL15                               --------->ANAC58                    ---------->DOF2 ---------->AGL15                               --------->ANAC58             <---------ICU4 ----------->AGL2                            <---------ZAT2                 --------->AHL20(2) ----------->AGL3                            --------->ZAT2           >>>>>>>>>>MYB80 ----GT1        <----------DOF2        <---------ARR14(2)------>ZmHOX2a(1)  <---------AHL20(2)   atttttagacttgtactgctttggccatgttcttctctgcgaattcaagctcgcatttcctgaaactattcaaaccaaaaaattactaaagcccatttca  10226100                                               <---------TOE2(3)                                             <---------ICU4                                             --------->ATHB51                                             --------->YAB1                                            --------->ICU4                                            <---------ATHB12                                            <---------ATHB51                                         --------------->AGL15                                         <---------------AGL15                --------->ANAC58                                        ----------------->AGL3      <---------ANAC55(2)           ---                                        <-----------------AGL3      --------->ANAC58              ---             --------->AHL20(2)         ----------------->AGL2      <---------YAB1      <---------At4g35610             <---------YAB1            ------>ZmHOX2a(1)---------->DOF2       --------->ANAC58  <----           --------->YAB1<-----------GT1<-----------------AGL1      --------->ANAC58    --------->At4g35610   atcccaaaaacacttataaatacaaaattacgcttcaattcctccaattatggaatagaaaagtctaattacgaaagattaagcaaattcagatgaaacc  10226200                ---------->DOF2            <-------TEIL          <---------ARR14(2)                  ---------->DOF2     ----------->RAV1(1)                    --------->TOE2(3)    --------->ANAC58                        --------->TOE1(3)    --------->ANAC46                  <---------ANAC55(2)    --------->ANAC58                  --------->ANAC46    ----------->HVH21                 --------->ANAC58   --------->SPL7                     --------->ANAC55(2) --->MYB46(1)<---------ANAC55(2)      --------->ANAC58                             -------->P --->MYB83--------->ARR14(2)      <-----------HVH21                             <---------MYB52(2) -----MYB59--------->CCA1(2)>>>>>>>>>>>>>>>>>LFY         --------->CCA1(2)<------ZmHOX2a(1)       ---   taatgtacgacagatacataaagactcaaaatccagtgtcacgaaaccttaagcgagagatagaagtagggatttaggagagactaaccatgagagaatg  10226300                                        --------->ANAC58                                        --------->ANAC58                                 --------->MYB46(3)                          <-------GAMYB --------->ANAC46                         <---------MYB46(3)             <------MYB46(1)    ------>NtERF2                                                       -             ----------->GT1 <---------At4g35610                               <----------DOF2     --         --------->ARR11(1)  --------->At4g35610                 --------->CCA1(2)             ------       ----------->ARR10<---------AtMYB61------>NtERF2          <---------ARR11(3)             <----- ------->DOF2<------MYB83--------->MYB55(2)       <---------SPL7--------->ARR11(3)             <-----   gaaagagcatagatttggtgaaattggtggttgcagccatcgacgccattgttgtacgagtagagagatattagagaagggctttttttctgaaattcga  10226400                                                                                     --------->bZIP60(1)                                                                                     <---------bZIP60(1)                                                                                     ================                                                                                     <---------TGA1a                                                                                     --------->ANAC58                                                                                     --------->bZIP60(2)                                                                                     --------->ANAC46                                                                                     --------->ANAC58                                                                                     <<<<<<<<<<HY5                                                                                     --------->TGA1a                                                                                     --------->O2                                                                                     <---------O2                                                                                     ================                                                                                     --------->ANAC55(1)                                                                                     --------->ANAC55(2)                                                                                     <---------ANAC55(2)                           --------->ANAC46                                         <-----------STF1                          --------->LBD16                                          <---------ALFIN1                         <---------ANAC58                                 --------->ARR11(3)                         <---------ANAC58               <---------REM1(1)--------->YAB1                         <---------LBD16              <-------GAMYB      <--------ATHB1    <---------          <---------MYB52(1)                          =========================================MYC_MYB         --------->LBD16 <---------ANAC46            --------->MYB52(2) --------->ICU4<-----------HVH21       <---------LBD16  <---------LBD16              <---------MYB46(3) <---------ATHB12   <---------DAG2 ---------->GT1       <-----------GT1      <---------ANAC58         --------->MYB46(3)<-----------TGA1 --------->GT1     --------->AHL20(2)      <---------ANAC58         ------------>CBF------>NtERF2 --->HSFB2a(2)     <---------AHL20(2)     <---------HSFC1(2)      <-----------GT1------>NtERF2<------ ----HSFB2a(2)     <---------ICU4         --------->HSFC1(2)  <----------DOF2   --------->ANAC46   <- ----HSFC1(1)<---------At4g35610*TSS     <---------TOE1(2)    =================================bZIP_DOF   gaagataaaaccggaagctaattttttccgggcaacttgttcgtagcttctgtgtttgttgaagcttttaaccaatgattttgcgccacgtcactttaac  10226500                                                                  <-----------GT1                                                           <---------TOE1(3)        --------->At4g35610                                <---------TOE2(3)                      --- =bZIP_DOF                                                ---------->DOF2              <---------ANAC58 =bZIP_DOF              <-----------GT1                --------->TOE2(3)       --------->ANAC58  ---- -DOF2  <---------At4g35610                            <----------DOF2         --------->ANAC58  ---- -----GT1            --------------->AtSPL8            --------->TOE1(3)      --------->SPL7     ---- ---------DOF2<------------CBF  <----------DOF2  --------->RAP2.6(2)   <----------DOF2 <---------ANAC58   tctttttttgagcttagattgtttttgtaccattcttttctagtgaagaagtcgcaactttaaagtttatacactttcagtacgaaattgagtgatcaaa  10226600                       --------->ATHB12                  <---------ARR11(3) ------>TOE2(3)   --------->ARR11(3)                             <---------DAG2 ----->ANAC58     --------->ARR14(2)                             <----------DOF2<-----------GT1 ------->GT1--------->REM1(1)                                 ------->TEIL   ----------->GT1 ----->ANAC58     <---------ARR14(2)              --------->HSFB2a(2)<---------YAB1       --------->TOE2(3)   cgtaaaatgttcttacatcagatattgattcgattttcgaaaaattcaatttctagtatagatgaaactttatcagagattgtaacatgcttcattaaac  10226700                                            --------------->AGL15                                           <-----------------AGL3                                   <                                           ----------------->AGL3                             -------                                    <---------ANAC58                                         <-------                                    <---------ANAC46                                <---------At4g35610                                    <---------ANAC58                                --------->At4g35610                                 <----------DOF2                        <---------AtMYB61    <-------                            <---------HSFC1(2)                     <-----------RAV1(1)       <-------                            --------->HSFC1(2)      ----------->HVH21 <---------ANAC46<----------DOF2                    --------->REM1(1)  <---------MYB46(3)  <-----------HVH21  <---------ANAC46<------   caaaaaaaaaaaaaaacatgctacaatagaaccatctttcgtggttctatgtatgggacatggtcatatgtgttgtggtcttgtggagctgtattgcgag  10226800            <---------ANAC58       --------->ATHB12      <---------YAB1 ---------ARR11(3) -->HSFB2a(2)                                                <---------ATHB12 --ANAC46   <---------ANAC58                           --------->ANAC46 --ANAC58  --------->ATHB12                            --------->ANAC58              <--------------- --ANAC58<---------WOX13(1)                            --------->ANAC58            --------->ANAC58 ---HSFB2a(2)                 <-----------GT1        <---------ALFIN1              --------->ANAC58 -   aagaactattgattgattgtggagttgtctatataccctctatgtatagagagactcaccccaaacatttgaaatacctctaggcaaaccattttgggcc  10226900  Previous    Next  AGI:  At2g24020.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G30620.1); similar to unknown [Picea sitchensis] (GB:ABK26000.1); similar to Os02g0180200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046090.1); contains InterPro domain Conserved hypothetical protein CHP00103 (InterPro:IPR004401) Range:  from: 10224781    to: 10226432    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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