Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                      --------->ANAC58                                                                                  ---------->DOF2                                                                          <---------AHL20(2)       --                                                                      <----------DOF2     --------->YAB1                           <-----------GT1          <-----------GT1   <---------DAG2--------->ANAC58            --------->MYB52(1)                 <---------ANAC46      <---------ANAC58--------->At4g35610  --------->YAB1   <---------MYB59          <---------AHL20(2)       <---------ANAC58<---------At4g35610   agaataatactgccaaactgacccaatttttaaaatccaaactaaatttatgtgtaactatttgtttgtttgctttttattttggaaagctaacataacc  10104200                                                                                                  <--                                                                                               <-----                                    <-----------GT1       <-----------GT1                     <------                           <---------ATHB12             <---------AHL20(2)                    -------                         ------>MYB46(1)              <---------YAB1                      --------->AHL20(2)                         ------>MYB83                <---------AHL20(1)             <---------ALFIN1                       <---------MYB59               <---------AHL20(2)           --------->AtMYB61<-             >>>>>>>>>GATA-1--------->YAB1       <---------ZAT6                <-----------GT1<------       <-------TEIL    <---------MYB111(1)     --------->YAB1             <---------AHL20(2)  -------   <-------TEIL       --------->ANAC55(2)   ------>ZmHOX2a(1)             --------->AHL20(2)--------- ------->ARR14(2)   <-----------GT1<-----------GT1 <---------YAB1<---------YAB1--------->ANAC46------   atatatacatacatagataaatatacctaatcatatttttccaatcctatagtattatttttatcttataattcaatttataaaccacacataaaaataa  10104300                            <-----------GT1 -------ICU4               <---------AHL20(2) ----ICU4               <---------AHL20(1) ---AHL20(2)            --------->AHL20(2)                                                     <----- -->AHL20(2)            --------->AHL20(1)                                                     ------ ----------GT1        --------->ARR11(3)                                                    <-------- ---ATHB51            <---------AHL20(1)                                            <---------ETT(2) -->ICU4              --------->AHL20(1)                                            --------->MYB46(3) >YAB1                <---------ARR11(3) <-----------GT1                       ------>NtERF2--------- --->YAB1        ----------->GT1      --------->ARR14(2)     <-------TEIL--------->MYB52(1)<---------ATHB12   ttatccctattccctagcatagaaaatattttatcttccatattttcgacattttggccatggtacatgcccaaataccgatgccatcgaccaataaaat  10104400                                                           --------->YAB1            --------->LBD16                               <---------YAB1                           ==    --------->YAB1                                ---------->ID1                               <----- ----ARR11(3)            <---------ICU4          <-----------GT1                               ------ --->ARR11(3)        --------->CCA1(2)       <----------DOF2                        <-------TEIL   -- -AHL20(2) <---------HSFB2a(2)            --------->ICU4--------->YAB1      <-------TEIL      ------>MYB83 >AHL20(2) --------->HSFB2a(2)       ----------->GT1 <----------DOF2--------->TOE2(3)         ------>MYB46(1)   cttcattcataatccagaagaagataagaatcacacatatagtaattcttttctccttttataatacaaatctcaaaattcatagattcaaaaaccaaat  10104500                      ----------->RAV1(1)                      <---------ALFIN1                      --------->AtMYB61                    ----------->RAV1(1)                   <---------ALFIN1                      --------->AtLEC2    <---------TOE2(3)           <---------AtLEC2 <------ZmHOX2a(2)          <---------ANAC58   <----------DOF2   --------------------->WRI1               --------->ALFIN1           <---------ARR11(1) ==================================HOX2a_HOX2a----------->HVH21        <---------ARR11(3) ----ARR14(2)      --------->DEAR3(1)     --------->ALFIN1             <---------ARR14(2) --->ARR14(2)      --------->AtMYB61      <---------ANAC46            <---------CCA1(2)            <- ---->ZmHOX2a(1)  --------->MYB46(3) ---------->DOF2   <---------ANAC58--------->ARR14(2)          <-   cctctcttaatttgcatcgcaccaccacagatcaaatcacaaaggtgtgtgacccttccatgcccaaaatccaaatctttaggtttaaaaaaaaaacatt  10104600                                                                                   ----------->HVH21                                                                                   <---------MYB52(1)                                                                                  --------->LBD16                                                                                 <---------ANAC58                                                                                 <---------ANAC58                                                                                 <---------ANAC55(1)                                                                                 --------->ANAC55(2)                                                                            <<<<<<<<<TBF1                                                                      <---------DEAR3(2)                                                                      <---------MYB46(3)                                        <---------ALFIN1              <------MYB83<-----------HVH21                                       *TSS<---------DAG2            <---------TOE2(2)            <-----------HVH21   <---------ANAC55(1)                  <---------TOE1(2)        <---------AHL20(2)      <---------ANAC58                    <---------MYB52(1)       --------->AHL20(2)       --------->ANAC55(2)     <------------------------ANAC81  ------>MYB83      <---------YAB1            <---------ANAC58       --------------------->WRI1<---------ANAC55(2)   <---------YAB1               <---------ANAC55(2)    <----------DOF2<------MYB46(1)    ------>MYB46(1) --------ANAC58          <---------ANAC46  <----------DOF2  <------------------------ANAC81  <------- --------ANAC58    <-------TEIL <---------ANAC46<-----------GT1    <-------GAMYB <---------ANAC46   tgcttcttattatatgtcacatacatgatgtgtttcgtgttcccactttataactctctttttttttttcgttggttcttcttccgtgacctagcctttg  10104700                                                  ----------->HVH21                              ------>ZmHOX2a(1)  <---------MYB59                             <---------MYB59    --------->ANAC55(2)                       ------>ZmHOX2a(1)        <---------At4g35610      --------->O2    --------->TOE2(3)         <---------ANAC55(2)                    <---------TOE1(3)  ------>NtERF2    <---------ARR14(2)           ----------->RAV1(2)   --------->AHL20(2)           <-  --------->LBD16  <---------ARR11(3)           --------->At4g35610  <---------YAB1    <---------TOE2(3) --------->ANAC46  --------->ARR14(2)         <-----------GT1     --------->ICU4      ---------->DOF2 ---DOF2          <---------CCA1(2)        <---------ZAT6    --------->YAB1        --------->TOE2(3)   attccgccatgtctgtttccatatcctaagtcctaacaagttattgtgttacctgaccttctctcatagttattaaaaacccaaatgttaaagtttttgt  10104800                                 <---------ZAT2                                 --------->ZAT2                           --------->At4g35610                         <---------WRKY38(1)                        <<<<<<<<<<WRKY38         <------MYB83                        <<<<<<<<<<WRKY26     --------->ATHB12               --------->ARR11(3)               <---------------AGL15        <---------YAB1                  <---------ARR11(3)              <-----------------AGL1      <-------GAMYB                    <---------CCA1(2)              <---------TOE2(3)  ----------->RAV1(2)                     <------MYB83             <-----------GT1--------->AtMYB61<---------MYB46(3)          <------MYB46(1)  <----------DOF2            <-----------GT1<---------At4g35610   <------MYB46(1)------>ZmHOX2a(2)         <---------DAG2           --------->AHL20(2)  <---------ALFIN1<---------WOX13(1)       --------->MYB59 ------>MYB46(1)      <------NtERF2     <<<<<<<<<<WRKY43 --------->MYB52(2)   <---------ARR11(3)        ------>MYB83 ----------RAV1(1)     <-----------HVH21 <---------MYB46(3)   --------->ARR11(3)      <---------MYB59   tttgtggcagcattttaacatttttggtcacctccacctgggtttgttgattggtcatgttattgatcttcaatttggtatctttggaccaacttttttt  10104900                                         <---------REM1(1)                    --------->AHL20(2)  <---------TOE2(3)         <---------ARR11(3)       <----------DOF2                   <---------ANAC58         <-------         --------->ARR11(3)  <---------ANAC58                       <---------ANAC58    <---------LBD16        <---------CCA1(2)    <---------ANAC58         <------ZmHOX2a(2)                <---------ANAC46   tttcttatatatatctgtataattcaatattgggttctttctaatgtagggtttagatcaattcttcatttcttggtgttgattttgttttgtggaattc  10105000                                                ------>ZmHOX2a(2)                                               <------ZmHOX2a(2)                                               --------->CCA1(2)                                    <                                              <---------ARR14(2)                                    <                                              <---------ARR11(3)                             --------                                   <-----------GT1         <---------TOE2(3)                 <-------                             <------ZmHOX2a(1)--------->ARR11(3)            <---------------AtSPL8 --                             ==========================HOX2a_HOX2a          --------------->AtSPL8 <-                             =========================HOX2a_HOX2a           <---------ICU4   --------                     --------->LBD16          <---------AGP1            <---------YAB1   <-----------HVH21      <---------At4g35610<---------MYB52(1)   --------->ARR14(2)     --------->ICU4 ------>MYB46(1)<- --GLK1(1)          <-----------------AGL1    --------->AGP1    ----------->GT1     ------>MYB83   --   agggttttagctaattgttcttccccagttaggagttttacttcttaagatctgaattgtttagattagtaattctgattagtaccaacaatgtcatgta  10105100  Previous    Next  AGI:  At2g23740.1    Description:  nucleic acid binding / transcription factor/ zinc ion binding. similar to SUVH6 (SU(VAR)3-9 HOMOLOG 6) [Arabidopsis thaliana] (TAIR:AT2G22740.2); similar to SUVH6 (SU(VAR)3-9 HOMOLOG 6) [Arabidopsis thaliana] (TAIR:AT2G22740.1); similar to putative SET domain protein SDG117 [Oryza sativa (japonica cultivar-group)] (GB:BAD08114.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22926.1); similar to SET domain protein SDG117 [Zea mays] (GB:NP_001105206.1); contains InterPro domain Pre-SET zinc-binding region; (InterPro:IPR007728); contains InterPro domain Post-SET zinc-binding region; (InterPro:IPR003616); contains InterPro domain Z Range:  from: 10104639    to: 10110478    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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