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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                                                        --------->RVE1(1)
                                                                                       <---------ARR11(3)
                                                                                       --------->GLK1(2)
                                                                                       --------->ARR11(3)
         --------->YAB1                                                          --------->LBD16
        <---------ATHB12                                                        --------->HSFB2a(2)
        <---------ATHB51    <----------DOF2--------->TOE2(3)                    <---------HSFB2a(2)
   --------->GLK1(2)        --------->TOE2(3)     --------->TOE2(3)       --------->ARR14(2)
-------->DOF2       <---------GLK1(2)   <---------GLK1(2)    --------->TOE2(3)------>ZmHOX2a(1)<----
 
gaaaagaatcaataataaacccaaattcttactttaaaatccaaattcttaaaccctagttttgcctcaaaaacccaattcctccagaaaaatctctcct  10029500
                        --------->TOE2(3)
                    <---------ICU4                                                              ----
                 --------->YAB1                                                      ---------------
------DOF2      <---------ATHB12                                    <---------YAB1 --------->MYB52(1)
 
ttaaactgatacaaatcgaatcataatccctaattccacaaactcatctttcaaatccaaaaccccaaaatatgatggaatgagagaaacggagacagag  10029600
                                                                                ------>ZmHOX2a(2)
                                                                               <---------RVE1(1)
                                                                               <------ZmHOX2a(2)
                                                                              --------->ARR11(3)
                                                                              <---------ARR14(3)
                                                                              <---------ARR11(3)
                                                                              --------->ARR14(3)
                                                                              --------->ARR14(2)
                                                                              --------->AGP1
                                                                              <---------ARR14(2)
                    <---------DEAR3(1)                                      ----------->ARR10
                    ------>ZmHOX2a(2)                            <---------TOE1(3)
                    ==========================HOX2a_HOX2a        <---------ANAC46
                    =============================HOX2a_HOX2a     <---------TOE2(3)
                   ==============================HOX2a_HOX2a    <---------At5g28300
                   ===========================HOX2a_HOX2a      ------------>AtMYB77  <-----------GT1
                   <------ZmHOX2a(2)              --------->GLK1(2)        --------->SPL7
                  <---------ARR11(3)             <---------ARR14(2)       <---------MYB52(1) <------
                  --------->ARR14(2)             --------->ARR14(2)   <---------At5g28300   --------
                  --------->ARR11(3)             <---------GLK1(2) <-------GAMYB<-----------------AGL3
------>DOF2       <---------ARR14(2)      <------ZmHOX2a(1)    ------------>MYB.PH3(1)    <---------
--------->ANAC81----------->ARR10      <------ZmHOX2a(1)       --------->MYB52(1)<----------DOF2
 
aaaggaagagattaccgagaagatcggcgagaaggctgaagaggaggagtcggattctgaacagaattacggttaccgtaagatcttttaacgggtcggg  10029700
                                                            <----------DOF2
                                                       --------->ARR14(1)
                                                       --------->GLK1(2)
                                                      <---------GLK1(2)
                                                      --------->ARR11(3)
                                                      --------->ARR14(2)
                                                      <---------ARR11(3)
                                                    ----------->ARR10
<---------TOE1(2)                              ==========================HOX2a_HOX2a
---DEAR3(2)           --------->CCA1(2)        ------>ZmHOX2a(1)    ------>ZmHOX2a(1)            ---
->ETT(1)     <---------ANAC58                  --------->At4g35610------>ZmHOX2a(2)              <--
--HVH21      <---------ANAC58       <---------GLK1(2) <---------ARR14(2)                 ---------->DOF2
 
tcttgggtttgagtttgcgagagagatttaagagacccagattgttcatcctctgaagattctctttgatcctctcttccctgcattgttcgtaaagaga  10029800
                       <---------ANAC46  <---------TOE2(3)
                       <---------ANAC55(2)
                       --------->HSFB2a(2)
                       <---------HSFB2a(2)                                           <---------YAB1
                       --------->ANAC55(2)                                           --------->ICU4
              --------->ATHB12<---------TOE1(3)                                    --------->YAB1
           <----------DOF2    <---------TOE2(3)   ------->TEIL                    <---------YAB1
       --------->GLK1(1)--------->LBD16  --------->MYB59                          --------->ICU4
<----------DOF2       <---------LBD16    <---------------AtSPL8                  <XXXXXXXXXXXXXXXXXX
------>ARR11(3)       <-----------------AG       <---------GLK1(2)              --------->YAB1
-------ARR11(3)   ----------->ARR10      <---------------AtSPL3                --------->ICU4 <-----
 
gacctttggggtttctttgattagttccggattagggtttgatttaggtactgaatcttgtgcttcagttctcatggtgagcatgatgatgatgaagatg  10029900
                                                          --------->YAB1          <------------CBF
                                           <---------At4g35610               <-----------TBP
                         <-----------HVH21 --------->At4g35610          <---------TOE1(3)
                  --------->GLK1(1)        *TSS <---------LBD16         <---------TOE2(3)
XXMIR414   --------->GLK1(1)             <---------RAP2.3(3)     ---------->DOF2<---------AHL20(2)
----YAB1   <---------GLK1(1)      <----------DOF2        <---------YAB1 --------->MYB59     <-------
 
atactgggtttcagatttcagaactctctgtcactctctttatggctgctctctggagaaatgatagtaaaagtttaggtttttatattgttttgagttg  10030000
                             <---------AHL20(2) --------->HSFB2a(2)
                            <---------YAB1      <---------HSFB2a(2)
                         --------->ICU4     <---------ANAC58
                  <-----------HVH21      --------->ZAT18
                 ------->GAMYB           <---------ZAT18
                --------->MYB46(3)   --------->DAG2                                 <---------GLK1(2)
  ------>ZmHOX2a(1)      --------->AHL20(2) <---------ANAC58              --------->ICU4
--At4g35610   --------->MYB52(1)    ---------->DOF2             <---------ZAT6<-----------GT1-------
 
atgtcctgatgttacagcaacggtcggatttattatttgaaaagtgtgcttatggaaatggggaatagtgtttggaaatgtttactagcttctgtatcat  10030100
                                          --------------->AGL15
                                          ==========================================================
                                          <---------------AGL15
                                      <-----------GT1
       -------->HAHB4          <---------YAB1
       --------->ATHB12       <---------ARR11(3)
       <---------ICU4         --------->ARR11(3)
      <---------YAB1          <---------AHL20(1)
      <---------ATHB12        --------->AHL20(1)                                                ----
      --------->ICU4         <---------AHL20(2)           <---------At4g35610 --------->ARR14(2)<---
 --------->TOE2(3)       <---------AHL20(2)               --------->At4g35610 <---------ARR14(2)<---
-->YAB1--------->YAB1    --------->AHL20(2)  <---------YAB1        <---------ZAT6   ---------->DOF2
 
aaatccctaatgatgggacttaatctttttaaatatttttgtttccttctaattgcaatacagctaagtagagatagtgggaatatggaaagttgtaatc  10030200
                                                     <---------TOE1(3)
                                                     <---------YAB1
          <---------AHL20(2)                         <---------TOE2(3)
          --------->AHL20(2)                  <---------DAG2
         --------->AHL20(2)                   <----------DOF2            --------->AHL20(2)
============MADS_MADS                     <---------ZAT18           <---------TOE2(3)
----------->AGL15                         --------->ZAT18          <-----------GT1
------------AGL15                         <---------ZAT14       --------->YAB1           --------->YAB1
-------DOF2    <-----------GT1            --------->ZAT14  <---------YAB1<---------AHL20(2)      ---
 
ttttaagagaaaattaataaaccattctacaaaaattgttcttggtgcactttattaagattacgaatattaacatttaaacaaatttccaatagaaata  10030300
                                                                           <---------ARR14(2)
                                                                     --------->ZAT6
                                                                   <-----------GT1
                                                               ------>MYB46(1)
                                                             ------->GAMYB------>MYB83
                                                             <---------MYB59
                                                          --------->WOX13(1)
                                                        ---------->ARF1   ------>MYB46(1)
       <----------DOF2                                 <-----------HVH21--------->AtMYB61  <------ZmHOX2a(1)
------->DOF2   ---------->DOF2               <-----------ARR10 ------>MYB83--------->ARR14(2) <-----
 
taaagtttgacttttgagtaaagtttagggactgtccataagattgagagtctcaccttgtcaaccaaattaacaccaaatcccttcacatttaggagga  10030400
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AGI:  At2g23530.1   
Description:  similar to protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT4G37110.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44617.1)
Range:  from: 10027732    to: 10029944    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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