Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                           ------>ZmHOX2a(1)                                                                        --------->TOE2(3)                                                                        --------->TOE1(3)                                                                     ------>ZmHOX2a(2)                                                                    <---------GLK1(1)                                                                    <------ZmHOX2a(2)                                                                    --------->GLK1(1)                     <------ZmHOX2a(2)                             <---------ARR11(3)                ------->GAMYB                                      <---------AGP1   --------->ANAC58              <---------At5g28300                                  --------->ARR14(2)              <xxxxxxxxxxxxxxxxsmallRNA(i)                         --------->ARR11(3)         -------             --------->MYB52(1)                             <---------YAB1          ------>MYB83      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)      --------->DAG2     <---------ARR14(2)      <---------     --------->TOE2(2)          <-----------GT1---------->DOF2    <---------CCA1(2) ------>MYB46(1)xx     --------->TOE1(2)    xxxxxxxxxxxxxxxx>smallRNA(i)      --------->ICU4          --------->ANAC58    <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)      <---------ATHB12   ----------->ARR10  --------->ANAC46   gttgctacatacgattaacggcgatcattttttgttacgctcttggcaataaagtgagcatcaagattagatctccttaactcaccaagcaattttcaat  9986100                                                           <---------At4g35610                                                       --------->AtLEC2                                                     xxxxxxxxxxxxxxxx>smallRNA(i)                                                    --------->WRKY18(1)                                                   <-----------HVH21                                   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)       --------->AHL20(2)                              xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)      <---------AHL20(2)                        ---------->DOF2            --------->ARR11(3)    <---------YAB1  --------->AHL20(2)  --------->YAB1          <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) -->WOX13(1)         <---------ATHB12       <---------AtLEC2     <----------DOF2            <-------- --GT1             --------->WOX13(1)     <-----------GT1<xxxxxxxxxxxxxxxxsmallRNA(i)--------->TOE2(3) xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) <---------WOX13(1)   ccaaaaaattccctagtttctcaatcaaaagaagggactgaaatttacatgaaggtcatgcagacgacttttgttttaattgaataacataaaactttta  9986200                                                                                ---------->DOF2                                                                             --------->YAB1                                                                          --------->YAB1                                                                         <---------AHL20(2)                                                                         --------->AHL20(2)                                                                        --------->AHL20(2)                                            --------->CCA1(2)        <---------AHL20(2)               <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                  --------->AHL20(2)            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                 --------->TOE2(3)           <------           --------->DAG2   --------->TOE1(3)              <XXXXXXXXXXXXXXXXXXXXMIR1888<----------DOF2      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)--------->AHL20(1)     --------->TOE1(3)    --------->TOE2(3)  <----------DOF2  ------->TEIL            <---------ARR11(3)   --------->ARR11(3)  <---------ARR11(3)  <---------DAG2<---------YAB1         ---------->DOF2 <----------DOF2  <---------AHL20(2)--------->YAB1 --DOF2   ---------->DOF2  --------->ZAT6  --------->ARR11(3)   <---------ARR11(3)  --------->ARR11(3)   ctcactttacaaaaaagtatgaatctataaccctagatttataaagatattagaaaactttttataaatcttaaattaataacaaagaactttaataaac  9986300                                                  <----------DOF2                                               <---------ARR11(3)                     <---------MYB52(2)     <---------TOE2(3)                     --------->MYB46(3)     <---------TOE1(3)                                      --             <---------WOX13(1)            <---------DOF5.7(2)                     <---------AHL20(2)           --------->ATHB12                ---------->DOF2              <-----------GT1      <-------      --------->GLK1(2)                 --------->TOE1(3)             --------->YAB1       <---------AHL20(2)      <---------ARR11(3)                --------->TOE2(3)             <--------ATHB1   <---------AHL20(2)      --------->ARR11(3)         --------->ANAC55(2)       --------->YAB1          --------->AHL20(2)     --------->RVE1(1) --------->MYB52(1)--------->DOF5.7(2)         <---------ATHB51  --------->AHL20(2) -----GT1 <---------YAB1       <-----------GT1 --------->ARR11(3)    <---------ATHB12 --------->AHL20(2)   tttttaaaaatcttgattgaataacaaacgattttacataatcgttaaagttcttttaaaatcataaaccaataataccccctaaatatttaatttatct  9986400          <---------ZAT18          ------>NtERF2         <---------ANAC58         <---------ANAC58    <-----------RAV1(1)                        <-----------RAV1(2)            <---------ANAC55(2)    --------->ALFIN1----------->GT1   --------->AHL20(2)                      --------->ANAC55(2) ---->ZmHOX2a(1)    <---------ANAC55(2)    <-------TEIL                 ------------>CBF ----GT1 <---------ANAC46             ----------->TBP               --------->AtLEC2 *TSS   cctcaagtgttgcgcccatgttatgtaaaatttcatccctataaatacatcagatggtccaagaggtttcatgcatcaatacataatacattttcgcctt  9986500                 <---------At4g35610               <-----------GT1          <---------YAB1         <---------AHL20(1)                                     <------NtERF2         --------->AHL20(2)                                    ------>NtERF2         <---------AHL20(2)                              <---------ICU4<---------TOE2(3)        --------->YAB1                               --------->HSFB2a(2) <---------ICU4       <---------YAB1                                --------------->AGL15      --------->AHL20(1)                             <---------HSFB2a(2)--------->ICU4      --------->AHL20(2)                             <---------------AGL15    --------->ANAC55(2) <--     <---------ICU4          <-----------GT1        <-----------------AGL2   <---------TOE2(3)<------    --------->ICU4    <----------DOF2               <-----------------AGL3  <-----------GT1<---------   cgactaaatattataatttagcttctttttttttctaattctcgtctcggtttttctagtaatggcgacgattaatgtttacgtttttgcatttatcttt  9986600                                                                                  <------NtERF2                                                                    <---------GLK1(1)               <------MYB83                               --------->O2       --------->ALFIN1               <------MYB46(1)                            <---------O2       <---------MYB46(3)               <---------MYB46(3)                    --------->MYB52(1)    --------->ZAT2              <---------AtMYB61                 <---------At5g28300 --------->GLK1(1)           <---------ZAT6                  ------>MYB46(1)<---------TGA1a  <---------At4g35610    <-- --------DOF2<--------P                    ------>MYB83   --------->TGA1a  <---------ZAT2         <-- ----DOF2  <-----------RAV1(1) <------NtERF2   <-----------GT1  <---------TOE2(3)<---------MYB46(3) --GT1 <---------YAB1         --------->RAP2.6(2) --------->ANAC46<------ZmHOX2a(1)             <----   cttttgactattagtgttggttcaattgaaggccgaaaactcaccaaattcaccgtaacgacgtctgaggaaatcagagctggtggctctgtattgtcgt  9986700                                      ------->PIF5                                      <-------PIF5                                      --------->LBD16                                     <---------O2                                     --------->O2                                    <---------LBD16                                  ----------->HVH21                              --------->DEAR3(1)                             <----------CDC5                            ------>NtERF2                            <---------ATERF1(1)                            --------->ABI4(1)                           --------->DEAR3(1)                           --------->ATERF1(2)                           --------->RAP2.3(3)                           --------->RAP2.3(2)                           <---------ATERF1(2)                          --------->ERF1                          --------->ORA47(2)                          --------->ATERF1(1)                          --------->RAP2.6(1)                          --------->DEAR4(2)                          --------->RRTF1(1)                          --------->RAP2.3(1)                          <------NtERF2  <-------GAMYB                         <---------ORA47(2)                 <---------TGA1a--------->ANAC58                 ----------->RAV1(2)                 --------->O2<------NtERF2                     <---------ARR14(2)                 --------->TGA1a--------->ANAC58               --------->ARR14(2)                 <---------O2--------->ATERF1(1)            --------->ANAC58                     <---                 =======================MYC_MYB             --------->ANAC46                  <------        ----------->RAV1(2)<---------DEAR3(1)               --------->ANAC55(2)               <------       ------>NtERF2     <---------ATERF1(1)                --------->ANAC58                  <------      ----------->HVH21  <---------RAP2.3(1)               <---------LBD16                   --------   --------->DEAR3(1)   <---------DEAR3(1)                 ------>MYB46(1)                 --------->GLK1(2)  --------->At4g35610   --------->DEAR3(1)                 ------>MYB83          <---------MYB52(1)  <---------At4g35610  --------->ATERF1(1)<--------P   --------->AGP1           --------->LBD16------ ---------TGA1   ==================================MYC_MYB--------->MYB52(1)   --------->LBD16<------ ---------HVH21  ================================MYC_MYB --------->AtMYB61    <---------LBD16-------- --NtERF2      <---------ALFIN1------>NtERF2      <-----------HVH21  <-----------HVH21    --------->KAN4(2)   cgtcacctccgactgagccacttgagtcgccgccgagccacggggttgataccttcagacctacggaacctggtcatagccccggtattggacattccgt  9986800                                                                                                <----                                                                                             <-------        ------->GAMYB                                                                        --------     --------->MYB52(1)                                                                      <------- <---------ICU4                                                                              <------- ----TEIL                                                                                    <------- ---ANAC46                                                           <----------DOF2        <-------- ---ANAC58                                              <---------WOX13(1)                  --------- ---ANAC55(2)                                         --------->ATHB12                      --------- ------->AtSPL8                                      <---------YAB1  <---------DAG2     ------->TEIL --->LBD16                                   ----------->GT1<---------ANAC58         <---------ANAC55(2) ---ANAC58    <------ZmHOX2a(1)         --------->ANAC55(2) <---------ANAC46         --------->ANAC55(2) ------->AtSPL3                         <---------ANAC55(2) <---------ANAC58<-----------GT1<---------   acataattaacggagaggaacaatagcatcgtctatgtgattacatgttgaaaatatgattggcctggtgactttttttttctgaatatgtatttacgta  9986900 ---TEIL                                             --------->AHL20(2) --ANAC58                                   --------->AHL20(2) ->ANAC55(2)                             <---------ICU4          <---------TOE2(3) --ANAC46                               --------->ICU4     <---------TOE2(3) --ANAC58                             --------->AHL20(2)   <---------YAB1 --ANAC55(2)                    ----------->GT1      <---------AHL20(2)                            <- -------AtSPL8              <---------YAB1  <---------AHL20(2)<---------WOX13(1)                   -- ------>AtSPL8    <---------ANAC58    --------->YAB1--------->AHL20(2)                        <------ ------>AtSPL3    <---------ANAC46 --------->YAB1   <---------AHL20(2)               ---------->DOF2 --GT1            <---------ANAC58<---------YAB1<---------AHL20(2)                <---------AHL20(2)   cagtttcgtcatattcagtttcttgcaagtgtgattgtaataatatttatttgattaaattaagattgatgtaatccatcttattttaaaagcacataca  9987000  Previous    Next  AGI:  At2g23440.1    Description:  unknown protein Range:  from: 9986485    to: 9986899    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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