Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                -------                                                                                              -------                                                                                              -------                                                                                            <--------                                                                                            ---------                                                                                           --------->MYB46(3)                                                                                     <----------DOF2        <---------YAB1                 --------->ZAT14                         <---------TOE2(3) >ZmHOX2a(1)        --------->ZAT6     <---------ZAT14                         <---------TOE1(3) ---MYB59      --------->YAB1<---------TOE2(3)                            <----------DOF2<-----------GT1   acttaacattctaataaacataacacttatataggttgaactacacttggtatttgatatttgtagttgtaattttcttttagggttctttgaaccactc  9817300                         <---------TOE2(3)                                 <---------ZAT14                        ---------->DOF2                               ----------->HVH21                 --------->AHL20(2)                                ------>ZmHOX2a(2)                -                 <---------AHL20(2)                               <---------GLK1(1)                -- -->ANAC46      --------->AHL20(2)                                <------ZmHOX2a(2)               --- -->ANAC58      <---------AHL20(2)       ----------->GT1         --------->ARR11(3)            <----- -->ANAC58   --------->ATHB12         ----------->GT1            <---------ARR11(3)          -------- -ALFIN1  --------->TOE2(3)          --------->DAG2      --------->HSFB2a(2)              <----------DOF2 >AtMYB61------>ZmHOX2a(2)          ---------->DOF2      <---------HSFB2a(2)           <---------YAB1   cacgattttgatccttgattaaattttaaagtatgttgaaaagtagaaaatatgtgtatcgagaaacgatctctgacttctctgatgttatgctttcact  9817400                                                                                   ---------->DOF2                                                                                 --------->ANAC58     <---------YAB1                                                              --------->ANAC58    <----------DOF2                                  <---------TOE2(3)     <---------At5g28300      - ------>GAMYB             --------->ARR11(1)      --------->AHL20(2)  <---------YAB1          <------ ------->MYB46(3)         <---------ARR11(3)------>ZmHOX2a(1)      --------->GLK1(2)     <-------TEIL ----->P<---------HSFB2a(2)         <---------MYB52(1)          <---------ARR11(3)<------ZmHOX2a(1) < ----MYB52(2)         ---------->DOF2    ---------->ID1       --------->ANAC58 <-----------RAV1(2)  < ->ZAT6 --------->HSFB2a(2)--------->CCA1(2)<----------DOF2   --------->ANAC58--------->LBD16 <------   aaccatctttatagaaaacatacaaaaagatttgattcgttttgtcctttgaataaatgttaccaagaaattctgattaccgcaggaaagatgcaacttt  9817500                                                         <------ZmHOX2a(1)                                                    --------->DAG2                                                   ---------->DOF2                                                ------->GAMYB<-------TEIL             <----------ID1                                                --------------->AGL15                 ----------->GT1 -------->ARR14(2)            <-----------GT1   <---------------AGL15                 --------------- ---DAG2           --------->YAB1              ----------------->AGL3  --------->ANAC58 ---------ARR14(2)>>>>>>>>>MYB98               --------->MYB46(3)      --------->ANAC58 ---------GLK1(2)<-----------GT1              --------->ANAC58   <-------MYC3       ---------->DOF2 ----DOF2      <---------AHL20(2)             --------->ANAC58   ------->MYC3      ------------------   tggattcgggtttatattttaacataacaaatttacaacacaatgggcaaccaaaaagaggagttcatgtgccaagcacttagaaaaaaagaaaaaaaaa  9817600                                                    <---------MYB46(3)                                                  <-------GAMYB                                                 <-----------RAV1(1)                                             <------MYB46(1)                                             <---------ANAC58                                             <---------ANAC46                                             <------MYB83                                             <---------ANAC58                                            --------->MYB55(2)                                            <---------MYB46(3)                                            <---------DEAR3(1)                                            --------->MYB111(2)                                           <---------ANAC46                                         --------->MYB52(2)                                         <---------MYB46(3)                                        <---------AtMYB61                                        --------->MYB111(1)                                        --------->MYB46(2)                                        --------->MYB111(2)                                        --------->ALFIN1                                        --------->MYB55(2)                                        <---------MYB46(3)             <---------ANAC46           <---------DEAR3(1)          --------->ALFIN1             <---------MYB55(1)                              <---------AHL20(2)        <---------ANAC58               <--------P--------->ALFIN1                     --------->AHL20(1)        <---------ANAC58 <---------ANAC58<------MYB83                                 <---------AHL20(1) --------->ANAC81        <---------ANAC58<------MYB46(1)                           <---------AHL20(2) ------>ANAC81<---------MYB46(3)     <---------MYB46(3)     ------->TEIL           --------->AHL20(2)   aaaaaaacaagcgtggtgtttgggttttcgagccttgagaggttggtgggtgtgttgttgtgaatctctaagttttctctgtaaattatatatttgttta  9817700                                                                                   --------->TOE1(3)                                                                                   --------->TOE2(3)                                                                                 <------ZmHOX2a(2)                                                                                --------->ARR14(2)                                                                                <---------ARR11(3)                                                                      =====================HOX2a_HOX2a                                                                      ------>ZmHOX2a(2)                                                                     <<<<<<<<<GATA-3                                                                     <------ZmHOX2a(2)                                                                     <<<<<<<<<GATA-1                                                                     <---------GLK1(1)                                      <-----------GT1                <<<<<<<<<GATA-4                        ---------->DOF2<---------TOE1(3)             ======================HOX2a_HOX2a                     <-----------TBP *TSS                            <<<<<<<<<GATA-2------>ZmHOX2a(1)                   <----------DOF2<----------DOF2                   <---------ARR11(3)                   <---------------AGL15                            <---------AGP1------>ZmHOX2a(2)         ------------>CBF   ----------->HVH21<---------ANAC58       --------->ARR11(3)   <----------DOF2   ----------->TBP --------------->AGL15     <---------ANAC58  <---------AtLEC2 --------->ARR11(3)  ------->TEIL    ----------------->AGL3  <----------DOF2<---------GLK1(2)      <---------ARR14(2)  <   catgtatataaaacaatgtttctttttaaagtgacccttttaagctttcttgaaaacaagattgtgcatagatctcttctaagatccttagctttgtttt  9817800                    ---------->DOF2                ------>ZmHOX2a(2)              --------->ARR14(3)              <---------AGP1 <---------ANAC58              --------->ARR14(2)              <---------ARR14(2)              <---------ARR11(3)           <---------YAB1              --------->AGP1 <---------ANAC58                                                 <------              <---------ARR14(3)        --------------->AGL15                           ----------->RAV1(2)              --------->ARR11(3)        <---------------AGL15                       <---------MYB59             --------->RVE1(1)       <---------ARR11(3)   --------->AHL20(2)        --------->AtMYB61          ---------->DOF2    <---------ANAC46---------->DOF2              ------->TEIL------>MYB46(1) ----------DOF2<------ZmHOX2a(2)--------->ZAT18      ----------->GT1   <---------YAB1 ------>MYB83   ctcttttgtgtctaaagatcttgaaagtcttgtgtgcaataacttattaaagagatagaaaaaaatgaagtttatgaaacttggaaccaaacctgattca  9817900                                              --------->TOE2(3)                                     <                            <---------HSFB2a(2)                                        <---------HSFB2a(2)                            --------->HSFB2a(2)                          --------->ANAC58           <                      <------MYB83         <-----------GT1               --------->ANAC58         <--                      <------MYB46(1)   <---------ICU4------->TEIL <---------YAB1      --------->HSFB2a(2) -TEIL---------->DOF2--------->MYB59   --------->AHL20(2)    <---------YAB1   --------->ICU4      <--   tttctgtctaaaggagacaatgttaggtttgtagaaaacaaatatttacctctatgtatttctctgattatgcttaagcaatgttttttctaaaactgat  9818000                                                           --------->At4g35610                                                         <---------ICU4                                                         --------->ATHB12                                                        <---------YAB1                                                      --------->YAB1                <---------TOE1(2)                     <---------ICU4     --------->ATHB12                                <---------YAB1    <---------AHL20(2)                             --------->YAB1    <---------YAB1        --------->MYB46(3)       <---------ICU4   <---------AHL20(2)----------->GT1              <---------YAB1 <---------YAB1 <---------TOE2(2)               --------->YAB1                           --------->CCA1(2) ---------AHL20(2)   --------->ANAC55(2)       <------ZmHOX2a(2)                      <---------TOE2(3) ---------AHL20(1)   <---------ANAC55(2)      --------->ARR11(3)                      --------->DAG2 -------YAB1<----------DOF2                   <---------ARR11(3)               <-----------------AGL2 -------AHL20(2)<---------TOE2(3)            --------->GLK1(1)           <---------ARR11(3)   attatttttattggctcttaggtatgtaacaaatgagttagaaacagagatcatcatcatcatcggcaatgtcaagttctatctgcataaggtatgaaac  9818100                                                                                          --------->HSFB2a(2)                                                                                      <---------ANAC58                                                                                      <---------ANAC58                                                           --------->At4g35610     --------->ARR14(2)                              ---------->DOF2              <---------At4g35610     <---------GLK1(2)                           --------->ANAC58            <-----------GT1             <---------ARR14(2)                   ---------->DOF2              <---------ANAC46             --------->DAG2  <-------                --------->TOE2(3)               <---------ANAC58            ---------->DOF2  --------       <----------DOF2     --------->ANAC58     <---------ANAC58         <---------ETT(2) <---------HSFB2a(2)   aaactctagcttttaaaacatcaaagaagaagcaaagtttttatgtttttgtgtgtttttcagttcccattgctgtcgaaaagcggattcttgcagaaac  9818200  Previous    Next  AGI:  At2g23050.1    Description:  phototropic-responsive NPH3 family protein. similar to phototropic-responsive NPH3 family protein [Arabidopsis thaliana] (TAIR:AT4G37590.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71996.1); contains InterPro domain NPH3; (InterPro:IPR004249); contains InterPro domain BTB/POZ fold; (InterPro:IPR011333); contains InterPro domain BTB/POZ-like; (InterPro:IPR000210); contains InterPro domain BTB/POZ; (InterPro:IPR013069) Range:  from: 9817737    to: 9819740    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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