Home
Tools
- Search
- Colocalization
- Gene Analysis
- Gene Identification
- Small RNA Targets
- MicroRNA Targets
Description
Documentation
Citations
Downloads
Publications
History
Contact
Links
Disclaimer
For complete usage of AthaMap please enable JavaScript in the settings of your browser!
Search
Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
Go to graphical and table display
1 10 20 30 40 50 60 70 80 90 100
<---------
ARR11(1)
--------->
GLK1(2)
--------->
ARR11(3)
<---------
ARR11(3)
<---------
ARR14(2)
--------->
ARR14(2)
<-
<---------
RVE1(1)
----
<---------
CCA1(1)
<-------
TEIL
--------->
ARR11(3)
------>
ZmHOX2a(1)
<---------
ARR11(3)
<---------
ARR11(3)
--------->
AGP1
<---------
REM1(1)
<-----------
ARR10
<---------
DAG2
<---------
CCA1(2)
<------
ZmHOX2a(2)
--
ETT(2)
<-----------
HVH21
<---------
CCA1(2)
---------->
DOF2
<----------
DOF2
--------->
TOE2(3)
aagttgtagtttgtcagatattttgaattgcaaatcttgtttagttaacaaagtcataaactacttttctcaaaatcatctcttcattccttagatccat
9781500
--------->
ANAC58
--------->
ANAC55(1)
--------->
ANAC55(2)
<---------
ANAC55(2)
--------->
ANAC55(1)
--------->
ANAC58
--------->
ANAC55(2)
--------->
ANAC58
--------->
ANAC46
--------->
ZAT6
----------->
HVH21
--------->
ZAT6
<---------
ANAC46
<---------
ANAC58
<---------
ANAC55(2)
<---------
ANAC58
<---------
ANAC58
--------->
ANAC46
--------->
YAB1
<---------
ANAC58
<---------
ANAC46
--------->
ANAC58
<---------
YAB1
---------->
DOF2
<---------
ANAC58
<-------
TEIL
<---------
ARR11(3)
--------
YAB1
<---------
ANAC46
--------->
At4g35610
<---------
YAB1
<
----->
YAB1
----------->
GT1
<---------
ANAC58
--------->
ZAT2
--------->
ARR11(3)
---
tataaaagtagagcgtgtaacatgaagtagttgtgtgcgtgtaacacgaaacagctacgtaacacaagaagatgttgattataaactaatagtcttggga
9781600
<------
ZmHOX2a(1)
<---------
TOE1(3)
<---------
TOE2(3)
<---------
TOE2(3)
<---------
AHL20(2)
<---------
AHL20(2)
--------->
AHL20(2)
--------->
AHL20(2)
<---------
AHL20(1)
<---------
AHL20(2)
--------->
AHL20(1)
--------->
AHL20(2)
--------->
AHL20(2)
<---------
AHL20(2)
<---------
AHL20(2)
--------->
AHL20(2)
--------->
AHL20(2)
--------->
AHL20(2)
<---------
AHL20(2)
<---------
ICU4
--------->
AHL20(2)
<---------
AHL20(2)
<----------
DOF2
<---------
YAB1
--------->
YAB1
--------->
AHL20(1)
--------->
YAB1
<-----------
GT1
<---------
AHL20(2)
<---------
AHL20(1)
<---------
AHL20(2)
---------
YAB1
<---------
AHL20(2)
<---------
HSFB2a(2)
--------->
AHL20(2)
--------->
AHL20(2)
------>
YAB1
<---------
AHL20(2)
--------->
HSFB2a(2)
------>
ZmHOX2a(2)
--------->
AHL20(1)
<--
ttataatcttttattaatttatcgatatactaattgttctaaaaaaataatttaggatcgaagaaatatataaatttattaaggtattaattcatccaat
9781700
------>
MYB46(1)
------>
MYB83
-------->
P
<---------
MYB59
------>
ZmHOX2a(1)
==========================
HOX2a_HOX2a
------>
ZmHOX2a(2)
===========================
HOX2a_HOX2a
<------
ZmHOX2a(2)
<---------
AHL20(1)
--------->
ARR14(2)
--------->
YAB1
<---------
ARR11(3)
-------->
ATHB1
--------->
ARR11(3)
--------->
ATHB51
<---------
GLK1(2)
--------->
ATHB12
--------->
ARR14(3)
<---------
YAB1
<---------
ARR14(3)
--------->
TOE2(3)
------>
ZmHOX2a(1)
<---------
ARR14(2)
<---------
GLK1(1)
<---------
AHL20(2)
---------->
DOF2
<-----------
GT1
--------->
HSFB2a(2)
--------->
ARR11(3)
-------
YAB1
--------->
TOE2(3)
------>
ZmHOX2a(1)
<---------
HSFB2a(2)
--------->
AHL20(2)
atgatttcaaagatcctcaatataacctactcctacatgtgactattcaacaaaacgtctggaaacctctattattgataatatatggtcctacatatga
9781800
<---------
ICU4
--------->
ATHB12
-------->
ATHB1
<--------
ATHB1
<---------
ATHB12
------------>
ATHB5
--------->
ANAC58
--------->
ANAC58
<------
NtERF2
--------->
AHL20(1)
--------->
ZAT2
<---------
AHL20(2)
<---------
ZAT2
<---------
AHL20(1)
<----------
DOF2
--------->
ANAC58
--------->
AHL20(2)
--------->
ARR11(3)
------>
NtERF2
--------->
ATHB51
<---------
ARR11(3)
--------->
ANAC58
----------->
GT1
<-----------
GT1
--------->
ANAC46
<---------
ATHB51
--------->
ZAT6
--------->
YAB1
--
--------->
ANAC58
--------->
ICU4
<-----------
GT1
<---------
ICU4
<--
--------->
ANAC58
<---------
YAB1
--------->
AHL20(2)
--------->
YAB1
---
---------->
DOF2
--------->
TOE2(3)
<---------
AHL20(2)
--------->
ICU4
<-----
--------->
AHL20(2)
--------------->
AGL15
<------------
CBF
<---------
YAB1
-------
ctattcaataaaacgccagcaagcctcaattattggtaattaattaactaattgaactctacatgtgataattatcttttttttttttttttggattaaa
9781900
--------->
At4g35610
------>
ZmHOX2a(2)
=================
HOX2a_HOX2a
<------
ZmHOX2a(2)
==================
HOX2a_HOX2a
<---------
ARR11(3)
--------->
ARR11(3)
--------->
ARR14(2)
<---------
GLK1(2)
*
TSS
<---------
ARR14(2)
------------>
CBF
---------
---------->
DOF2
<---------
At4g35610
<---------
At4g35610
<-
------->
CCA1(2)
------>
ZmHOX2a(1)
<---------
ANAC58
---------
-------
ARR11(3)
--------->
TOE2(3)
<---------
ANAC58
---------
------>
ARR11(3)
--------->
TOE2(2)
<---------
ANAC46
<---------
CCA1(2)
----
TOE2(3)
--------->
TOE1(2)
--------->
MYB52(1)
--------->
ZAT6
--------->
ARR14(2)
--
--->
DOF2
<---------
CCA1(2)
<---------
ATHB12
<-----------
GT1
<---------
ARR14(2)
<--
gatataaagatccttgtatcctaagatgactc
aatctttagaaactaagagaga
atggaattaacactaaaattgctggttctgcttctgtttatcttaa
9782000
<------
MYB46(1)
<------
MYB83
<---------
MYB46(3)
<-----------
RAV1(1)
<---------
ICU4
>
TOE1(3)
--------->
MYB52(2)
--------
ICU4
--------->
LBD16
<---------
MYB52(1)
>
TOE2(3)
--------->
LBD16
<---------
MYB46(3)
>
YAB1
<--------
P
<---------
ANAC58
--------->
MYB52(2)
------->
YAB1
--------->
YAB1
<---------
LBD16
<---------
LBD16
-------
ATHB12
<----------
DOF2
<---------
ANAC58
<----------
DOF2
--------->
LBD16
<--------
atcatcatgttggttctggctctatcgtcaagtttcttcccggttttgaaggccctcttcctttcgaacttgaaaccgg
gtttgttagttctctcttttg
9782100
--------->
ZAT18
<-------
TEIL
<---------
ZAT18
--------->
ICU4
--------->
MYB52(1)
<------
ZmHOX2a(1)
--
DOF2
----------->
GT1
---------->
DOF2
<------
ZmHOX2a(1)
<--------
caacaatgtgttttgagtttggagtttgtaattagtcattcttttgactaaag
gtacattggtattggtgaggaagaggaagtgcaattgttctattatt
9782200
-----
------
--------->
ARR11(3)
<---------
HSFB2a(2)
--------->
ARR14(2)
--------->
HSFB2a(2)
---------->
DOF2
<---------
ARR14(2)
--------->
HSFC1(1)
<---------
GLK1(1)
--------->
ARR14(2)
<---------
LBD16
--------->
ARR14(2)
<---------
ARR11(3)
<------
ZmHOX2a(1)
-------------
<---------
ARR14(2)
<---------
ARR14(2)
--------->
ALFIN1
<----------
DOF2
-
YAB1
--------->
GLK1(1)
<---------
ANAC46
--------->
ZAT6
<-------------
tcatcaaatctgagagaaatccaaaagaagaccctcttcttctctggttaagtggaggacctggatgttcttctatcactggccttcttttccagaatg
g
9782300
<-------
GAMYB
----------->
GT1
<------
MYB46(1)
<------
MYB83
----------->
GT1
--------->
ALFIN1
--------->
DAG2
<------
ZmHOX2a(1)
---------->
DOF2
--------->
ARR11(3)
<---------
TOE1(3)
<----------
DOF2
<---------
ARR11(3)
---->
At5g28300
<---------
TOE2(3)
<---------
ANAC58
--------->
AHL20(2)
<----
----->
GT1
<----------
DOF2
<---------
ANAC58
--------->
AHL20(1)
--------->
ATHB12
---->
AGL1
<---------
ANAC58
<---------
ANAC46
<---------
AHL20(2)
<---------
ANAC58
----
AGL1
<---------
ANAC58
<------
ZmHOX2a(1)
--------->
AHL20(2)
<---------
ANAC58
<
taaatctctattttttgctcttgctttaaggattattttcaaaggattgcttaaagtgggttaaaaaaaaattaagaccttggtttcttgatttcttag
g
9782400
Previous
Next
AGI:
At2g22970.1
Description:
SCPL11; serine carboxypeptidase. Identical to Serine carboxypeptidase-like 11 precursor (SCPL11) [Arabidopsis Thaliana] (GB:Q2V465;GB:O64807); similar to SCPL9, serine carboxypeptidase [Arabidopsis thaliana] (TAIR:AT2G23010.1); similar to SCPL12, serine carboxypeptidase [Arabidopsis thaliana] (TAIR:AT2G22920.1); similar to SCPL12, serine carboxypeptidase [Arabidopsis thaliana] (TAIR:AT2G22920.2); similar to 1-O-acylglucose:anthocyanin-O-acyltransferase [Clitoria ternatea] (GB:BAF99695.1); contains InterPro domain Peptidase S10, serine carboxypeptidase; (InterPro:IPR001563)
Range:
from: 9781933
to: 9785608
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.
printer-friendly version