Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                    <-----------GT1                                  --------->TOE2(3)               <---------ICU4                               --------->GLK1(2)          ------>ZmHOX2a(1)          <----------DOF2       <---------GLK1(2)                ---------         --------->TOE2(3)          <---------ANAC58       --------->ARR14(2)            ----------->RAV1(1) -------------->AtSPL8              <---------ANAC58       <---------ARR14(2)     --------->DAG2 ---------------AtSPL8         <------ZmHOX2a(1)     <----------DOF2             ---------->DOF2 >YAB1   --------->TOE1(3)    <---------YAB1--------->ARR14(2)    --------->REM1(1)     --------->REM1(1)   tttgagtacttccttaattgttacatttcactaggattgctttccaaatattcaactttcagattcttacatcaatatgttgaaaaagctacaccagtaa  9702600                                                                                               ------                                                                                               ------                                                                                      --------->ANAC58                                                                                      --------->ANAC58                                                            <---------AHL20(2)        --------->ANAC46                                                           --------->AHL20(1)        --------->ZAT18                                                           <---------AHL20(1)      <---------ZAT18                                                         <---------AHL20(1)        --------->ZAT18                                                 ----------->GT1                   <---------ZAT14                                            --------->AHL20(2)        --------->ARR11(3)       <-----                                          <---------------AGL15       <---------ARR11(3)    ---------                                          --------------->AGL15 <---------AHL20(2) --------->ZAT14     <-------TEIL                  <---------ARR11(3)    --------->AHL20(1) <---------AHL20(2)------- -->GT1       --------->MYB52(1)   --------->ARR11(3)   --------->AHL20(2)  --------->AHL20(2)-------   aactagtttcatgggctaactgataaatctcacaatagattttagtttatatagtaaaatatatattttataaatcttttaaatgtgcacacaaaaaaat  9702700 <---------AHL20(2)      --------->AHL20(2)                                    --------->STY1(2) --------->AHL20(2)      <---------AHL20(2)                                    <---------STY1(2) --->ARR11(3)           --------->AHL20(2)                                    ------>MYB46(1) --->GLK1(2)            <---------AHL20(2)                            --------->AHL20(2) ----ARR11(3)    --------->At4g35610                              --------->AHL20(2) >AHL20(2)       <---------At4g35610                              <---------AHL20(2)  --------->DAG2 -->CCA1(1)   <---------At5g28300                        ----------->GT1      ------>MYB83        <-- -->RVE1(1)  <-----------GT1                   --------->ICU4    --------->AHL20(2)  ---------->DOF2   cttttaaatgtgaatttacagctaaatttttttaaaaacatttgctgtaatattcagaagtgtaattttaaattaaaacctagctagtaaagtaatagtc  9702800                                                                       <----------DOF2                                                                  <---------MYB59                                                                 <---------ANAC58                                                                 --------->ANAC55(2)                                                                 <---------ANAC55(2)             <---                                                                 --------->ANAC58                ----                                                                 --------->ANAC58               -----                                                                 --------->ANAC46               -----                                                            <---------ICU4                      -----                                                            --------->ATHB51                    <----                                                            <--------HAHB4                      <----                   <-----------GT1                         <---------YAB1                       -----           <-----------GT1                         --------->ICU4<---------ANAC55(1)            =====       <---------AHL20(2)                      ------------>CBF  --------->ANAC55(1)            <----      --------->AHL20(2)                      --------->ANAC58   <---------ANAC58               <----      <---------AHL20(2)               <---------AHL20(2)  --------->ICU4                 <---------AHL20(2) -------REM1(2)<----------DOF2--------->ANAC46--------->ANAC58 <-----------GT1            --------->AHL20(2)   tacacgattttaatttccttttatccacttcaacgtaatattaaaaattcgcaatgtttccattattacgtaactttctaaactcgtttcatataatttc  9702900               --------->YAB1        ----------->GT1       <-------TEIL    <---------MYB46(3) <------------CBF                                         --------->YAB1 ------------AGL15                                        <---------ICU4 ----------->AGL15                                     --------->YAB1 ------------>AGL3                                <---------YAB1<----------DOF2 ------------>AG                                  --------->AHL20(2) ------------>AGL1                                <---------AHL20(2) -------------AG                   <---------GLK1(2) <---------YAB1                       --------->YAB1 -------------AGL1           --------->ATHB12  <---------AHL20(1)              --------->At4g35610  - ------------>AGL2        <------------CBF     <---------ARR11(3)              <---------At4g35610  - ======================================================================================MADS_MADS    < -------------AGL2    --------->ANAC58         --------->AHL20(1)      --------------->AGL15--------- -------------AGL3    --------->ANAC58         --------->AHL20(2)   <-----------GT1      <---------YAB1   caaaattggttcgtaaatcatatcaagaaattgatttgattctccactatatattattaataatctcttttgaccagttttagctaaaactataatacta  9703000                                         --------->O2                                      <---------ZAT18                               --------->ATHB12                               --------->YAB1                               <---------ICU4                               <--------HAHB4                               --------->ATHB51                                     ------->TEIL    ---------->DOF2        <------NtERF2 <---------O2        =======================HOX2a_HOX2a    ===============================================bZIP_DOF  ====================HOX2a_HOX2a  XXXXXXXXXXXXXXXXXXXX>MIR169D-G      --------->ZAT18        <------ZmHOX2a(2)   ----------->HVH21 -------->ANAC58          --------->LBD16--------->TGA1a    --------->AGP1   ------>ZmHOX2a(1) -------->ANAC58         --------->LBD16 <---------TGA1a    <---------ARR14(2)  --------->LBD16 ----------ID1--------->YAB1  --------->ICU4   ----------->RAV1(1)        ------>ZmHOX2a(1)      ---- >ZAT6      ------->TEIL<---------LBD16<---------ALFIN1     --------->ARR14(2) <---------ANAC46<-----   agaagccaaagatgaatcatcgtctcgccggaataattagcccacttggccacattactacagatccaattcgttcctcctccgtgaacccttcgtctcc  9703100                                                                              ------>ZmHOX2a(2)                                                                              =======================HOX2a_HOX2a                                                                             ========================HOX2a_HOX2a                                                                            --------->ARR11(3)                                                       <---------At4g35610  <---------ARR11(3)                                                       --------->ZAT2      --------->GLK1(1)                                                       ----------->RAV1(2) <---------GLK1(1)                                                       <---------ZAT2 --------->YAB1      --------->ARR14(2)                                                   <-----------HVH21 <---------ATHB12     <---------ARR14(2)                                                 ------->MYC3       ------>MYB83  <---------At4g35610                                             --------->MYB46(3)     ------>MYB46(1) <---------MYB46(3)                                --------->TOE2(3)<-------MYC3      --------->WOX13(1) <---------MYB52(1) ----->LBD16                 <---------CCA1(2)  --------->O2 <---------ANAC58<---------GLK1(1)======= ----LBD16         <-----------GT1       <---------MYB52(1)  <---------ANAC58<------ZmHOX2a(2)------>ZmHOX2a(1)   ggtttactacaaaaccattgttaaccatttcaaatctcaaaccggtaaccacgtttcacctgggcttaccaatcaagagatctcagccgttgaatcctct  9703200                                                      <------MYB46(1)                                                      <------MYB83                                                      <---------DEAR3(2)                                                     --------->MYB111(2)                                                     <---------AtMYB61                                                     --------->MYB46(2)                                                     --------------->AtSPL8                                                     --------->MYB111(1)                 <---------LBD16                                                     --------->MYB55(2)                <---------ARR14(2)                              <---------GLK1(2)      <---------MYB46(3)               <---------SPL7                          <---------MYB52(1)        <---------MYB55(1)       <---------ARR14(2)------                     ------>ZmHOX2a(2)              <--------P              <---------SPL7     <-----                    <---------GLK1(1)              <---------MYB52(1)      <---------ANAC58   <------                   <---------ARR11(3)              <-------GAMYB           <---------ANAC58--------->LBD16        <----------DOF2  <---------SPL7         <---------LBD16  <-----------GT1   <-----------HVH21 ===========================HOX2a_HOX2a       <---------SPL7    <-----------GT1  --------->LBD16-----   catggtttctctttccctcttgatctccgttcgattctccaaaccggtcttccggttggtaccaattttcccaattggcgaaccgggtcgaaccggaata  9703300                                                                                  ----------->HVH21                                                                                  ----------->TGA1                                                                               <---------ARR14(2)                                                                             --------->LBD16                                                                            --------->ANAC58                                                                            --------->ANAC58                                                                       <---------ETT(1)                                                                       ----------->HVH21                                   <-----------TGA1                   --------->DEAR3(2) <------NtERF2                                   <-----------HVH21                  ------>ZmHOX2a(2) --------->LBD16                                  --------->ETT(2)                   <------ZmHOX2a(2) --------->ALFIN1                               --------->ANAC46                     <---------ARR14(2) <----------CDC5                               <---------O2    --------->GLK1(2)    --------->ARR14(2)<---------LBD16 --->KAN4(1)                   --------->O2   <---------GLK1(2)<---------LBD16 --------->ARR14(2)<--- ----KAN4(1)                   --------->bZIP60(2)       <---------GLK1(2) <---------LBD16    <------ ---KAN4(2)                  <---------ALFIN1 --------->ARR14(2)   --------->GLK1(1) <---------bZIP60(2) ---->YAB1                  <---------REM1(2) <---------ARR14(2)   <---------GLK1(1) <---------ANAC46   atcttcttctccctcttcttaatctgtctcaacacgtcgtcagaaatggattctgggtcgattcttgggggatccgacccggaaatgacgcggaggcttt  9703400                                                                                        <<<<<<<<<<E2Fb                                                                                      <---------ANAC58                                                                                      >>>>>>>>>>E2Fa                                                                                      <---------ANAC46                                                                                      <---------ANAC58                                                                                     <---------LBD16                                                                                     <<<<<<<<<E2Fd                                                                           ------>NtERF2<------NtERF2                                                                          --------->ANAC58                                                                          --------->ANAC58                                                                        <---------ATERF1(1)                                                                        ------>NtERF2<<<<<<<<<E2Fc                                                            <---------ANAC58    <---------ARR14(2)                                                            <---------ANAC58<-----------------AGL3                              --------->LBD16   --------->ANAC46       --------->DEAR3(1)   <--------                        ------>ZmHOX2a(2)    <---------ZAT14--------->ANAC55(2) --------->ARR14(2)                       <------ZmHOX2a(2)     --------->ZAT14--------->ANAC46----------------->AGL3                 <---------WOX13(1)          <---------ARR14(2)        --------->ANAC46--------->LBD16 --------HVH21 --------->ATHB12<---------MYB52(1)         <-----------GT1 --------->ANAC46 --------->GLK1(1) ----DOF2 --------->ARR11(3)<---------LBD16  --------->ARR14(2)        <---------DEAR3(1)  <---------GLK1(1)   gtcactcgtgaagaaattgattgagatcgctccggtactcgtccctgtatacggcgatttttacgtcccttcgacgacgccaaatttggcgggaaatcca  9703500  Previous    Next  AGI:  At2g22790.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G67020.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO17740.1) Range:  from: 9703012    to: 9703989    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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