Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                       ------>MYB46(1)                     --------->MYB52(1)                     ------>MYB83                    --------->MYB55(1)                   --------->AtMYB61            --------->YAB1                                                                         --           --------->ICU4                                                                         <--           <---------YAB1                                                                      ------           <---------ATHB12                                                                    ------       XXXXXXXXXXXXXXXXXXXX>MIR418                                                             <-----      --------->ANAC58 --------->ANAC58                                                ==============      --------->ANAC46 --------->ANAC46                                           --------->YAB1  <--      --------->ANAC58 --------->ANAC58                 <---------ZAT14          <-------TEIL  <----- -->ZmHOX2a(1)  <-----------GT1 <----------DOF2         --------->ZAT14<-----------GT1 ---------->DOF2   ttgtataaacgcaatgataaaccaaacgcaaatgcttttattccaaactcaaaatcagtgaacagacattttctcaccatacattcatagaaagctatat  9290400                             <------NtERF2                           <---------WRKY12                         <-----------TGA1                         <-----------HVH21                        ===============================================bZIP_DOF                        --------->ANAC58                        --------->ANAC58                                             <---------GLK1(1)                        <---------TGA1a                                            <------NtERF2                        <---------TGA2(1)                                         --------->LBD16          <---------YAB1--------->TGA2(1)                                        --------->DEAR3(1)     <---------ICU4     <---------bZIP60(1)                                     <---------LBD16  <-----------GT1       --------->ANAC46                                      --------->DEAR3(1) ------->YAB1           --------->ANAC55(2)                                   ------->GAMYB -------AHL20(2)        <---------ANAC55(2)                                  --------->DEAR3(2) --->AHL20(2)           --------->bZIP60(1)                                  --------->MYB46(3) --->AHL20(1)           --------->TGA1a                          --------->At4g35610 --------->GLK1(1) ----ARR11(3)           --------->O2                  <-----------RAV1(2)  <---------ARR14(2) =================================bZIP_DOF  --------->YAB1       --------->ZAT2--------->MYB52(1) -------YAB1<---------ICU4--------->TGA2(2)<---------YAB1   ---------->DOF2--------->ARR14(2) ----AHL20(1)  --------->ARR11(3) <------ZmHOX2a(1)----------->HVH21     ----------->ARR10    <------   attataaccattactaatgtcttcttacgtcagcgaggaacatttatcaaagtttgacaggggaaagagctggagaagaaccgccggagttcggagattg  9290500                                                                    --------->ATHB12                                                                --------->MYB46(3)                                                              ----------->RAV1(1)                                                           <------NtERF2                                                          --------->ORA47(1)                                                          ------>NtERF2                                                          <---------ATERF1(1)                                                          --------->LBD16                        ----                                                         --------->DEAR3(1)                     <----                                                         --------->ATERF1(2)                    -----                                   --------->ANAC58      <---------ATERF1(2)              <-------GAMYB                  <---------MYB46(3)                    <---------LBD16<---------ZAT6    <---------DEAR3(1)       --------->ANAC46            --------->ANAC58     --------->ATERF1(1)     <---------bZIP60(1)      <---------LBD16            ---------->DOF2      --------->DEAR3(1)        --------->bZIP60(1)--    --------->MYB46(3)   ------>ZmHOX2a(1)       --------->ANAC58  <---------ATHB12    ------->GAMYB< ---WOX13(1)<------ZmHOX2a(1) <---------ZAT6     --------->ANAC58--------->WOX13(1) --------->MYB52(1)   acagaaaccacggaggacattggtttcctccagtgtaaagccaagagaagtaagcatcgccggccaacaatcagtggtaatgacatcaacggcgttgcag  9290600                                                                           --------->ZAT18                                                                           <---------ZAT18              <------MYB83                                              <---------ANAC58             <---------AtMYB61                                          <---------ANAC46 ------->GAMYB<------MYB46(1)                    <---------ICU4         <---------ANAC58 ----->MYB46(3)         <---------MYB52(1) <------ZmHOX2a(2)    --------->ZAT2 -----At4g35610        <-------GAMYB      --------->ARR11(3)    --------->At4g35610 ---->At4g35610   ----------->HVH21       <---------ARR11(3)    <---------ZAT2        --------->ANAC46 ------>P    --------->MYB59 ---------->DOF2------>ZmHOX2a(2)   <---------At4g35610 --------->ZAT6--- ------------AtMYB77<---------At5g28300<---------KAN4(2)   <---------bZIP60(1)      <---------ALFIN1   caaccgtagccgagtttggtctcaccgttgagaaagaagagaacgatctcattagtacatgacttcagctcgtagagtgcatcccaacactgcatcagtc  9290700                                             <------NtERF2                                           <---------ANAC46                                       <---------TGA1a                                       --------->TGA1a                                      ------>NtERF2                                   <-----------HVH21                                  --------->ANAC46                                  --------->ANAC58                               <---------ARR14(2) <---------ZAT14                               --------->ARR14(2) --------->ZAT14                         <------MYB46(1)<-------PIF5   --------->ZAT2                              --                         <---------MYB46(3)<---------ANAC58                               -----------      <--------P--------->ANAC46  --------->ANAC58<---------ZAT18                        --------->At5g28300      <---------MYB52(1) <------MYB83<---------ALFIN1  --------->At4g35610              ----------->GT1      ===========================================MYC_MYB                               <---------DEAR3(1)     <---------MYB52(1) <---------AtMYB61  <---------ANAC58                            <---------ANAC46    --------->LBD16  <-----------RAV1(1)------->PIF5   <---------At4g35610           --------->MYB52(1)  <---------LBD16<---------RAP2.6(3) --------->DEAR3(1)<---------ZAT2               ----------->HVH21 ------>ZmHOX2a(1)<---------MYB52(1)----------->HVH21 <-----------RAV1(1)           ----------->TGA1< --->ZmHOX2a(1) --------->RAP2.6(2)------>NtERF2  --------->ZAT18           <------ZmHOX2a(1) -------   ctcctccggttagtctagccgctatgttggtggaatccgccacgggcgggagtgctctgctggagacgttgagaacgaggagaagagtgacggtgacaaa  9290800                                                      <---------ANAC58                                                      <---------ANAC46                                                      <---------ANAC58           --------->At4g35610                                            <-----------RAV1(1)                  <---------At4g35610                                      <---------GLK1(2)                   <------MYB46(1)                >>>>>>>>>>>>>>>>>LFY  <---------ARR11(3)                  <------MYB83              <               --------->ANAC46       --------->ARR11(3)              <---------ARR14(2)     -------- --------->GT1 --------->ANAC58       --------->ARR14(3)              --------->ARR14(2)    <-------- >HVH21 <---------ZAT6                <---------ARR14(3)   <---------AtMYB61  ----------->ARR10   --- ------ZmHOX2a(1)             <----------DOF2     <------------CBF   <------ZmHOX2a(1)    --------->YAB1 --->DOF2      --------->ANAC58       <---------ARR14(2)----------->HVH21--------->MYB59<-----------TBP   gaggaaacttgtgttagaagccattgtgttttcttttgaagattttgtgttgtattgtgtgatggtttagaggatttggtaagagctgctatttataata  9290900                                    ---------->DOF2                                  <---------YAB1                                --------->ATHB12                             --------->YAB1                                                   <------                             -------->HAHB4                                       <---------ICU4                            <---------ATHB51                                      --------->ATHB12             <---------ARR11(3)<---------YAB1                                    <---------YAB1 -----            <------ZmHOX2a(1)<---------ICU4                                      <---------ATHB12   --------->ICU4           --------->ICU4                                       --------->ICU4 -----   <---------YAB1        <---------AHL20(2)                             <------NtERF2         ------- ---------YAB1      <---------TOE2(3)     ----------->GT1            --------->ZAT18   <-----------GT1 ->YAB1 ---------->DOF2  --------->AHL20(2)                     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) -YAB1<---------YAB1<---------TOE1(3)<---------TOE2(3)      --------->ALFIN1    <---------TOE2(3) -------->GT1--------->ARR11(3)--------->ICU4           <------ZmHOX2a(1)  <---------ZAT6    <-------   ctgtgattatgaaaggatttttgaggtttaattatgattaaagatggtttttagtggaggaagtgggagagggcagagagttaatgattttacttaaatc  9291000                                                                            <---------------AGL15                                                                            --------------->AGL15                                                                           <-----------------AGL3                                                                       <---------ANAC58                                                                       <---------ANAC55(2)        ------->TEIL                                                   --------->ANAC55(2)     ----------->GT1                                              <---------MYB46(3)     --------->ANAC55(2)                            --------->ANAC58   <---------ANAC58     <---------ANAC55(2)                            --------->ANAC46  <-----------------------TaNAC69(2)  <---------ATHB12    <---------WOX13(1)            --------->ANAC58  --------->MYB52(2) ---ARR11(3)         <------------CBF            <-------TEIL     ----------->GT1 ---->TOE2(3)       --------->ATHB12            --------->CCA1(2)<---------ATHB12                 --- ---->TOE1(3)       <--------ATHB1         ---------->DOF2    <---------WRKY12                  <---- -->ARR11(3)       --------->ICU4        ------->GAMYB        <---------WRKY38(1)             <------ --CCA1(2)         <---------YAB1     --------->MYB52(1)     ------------>CBF            <----------DOF2   ttaaatcatgtaacttagagaatgattgaataggtggtcttaacggaaagatacaagcgaagagtcaatggttacttgataaatatagaaactttgaaga  9291100                                                                                    <---------ARR11(3)                                                        ----------->RAV1(2)     --------->ANAC58   --                                                        --------->ZAT2          --------->ANAC58<----                          --------->MYB55(2)            <---------ZAT2   --------->At4g35610 <------- -------->GT1   --------->At5g28300                  ----------->HVH21   <---------At4g35610 -------- --------CBF  *TSS        <---------MYB46(3)     <------NtERF2           <---------ZAT2     <-------- ---YAB1   --------->ALFIN1 <--------P        ------>NtERF2              --------->ZAT2   --------->YAB1   ttgtataacaagagtggctgtaatacagtggttagtattctacgttgaggccgaagggacctgggctcgattcccagcagacacactatctttcatcata  9291200                                     ------>MYB46(1)                                     --------->MYB52(1)                                     ------>MYB83                                    ----------->HVH21                                    --------->MYB55(1)                                   <---------MYB111(2)                                   --------->MYB46(3)                                   <---------MYB55(2)                                   <---------MYB111(1)                                   <---------MYB59                                   <---------MYB52(2)                                   <---------MYB46(2)                                            <--- ------->ARR11(3)                 --------->ANAC46                                           <------- -----ICU4         <-------TEIL   <---------At4g35610                --------->ALFIN1        <------- --ICU4    <---------DAG2         --------->ANAC58               <-----------RAV1(2)       <---------At4g35610 ->YAB1    <----------DOF2        --------->ANAC58              <-------TEIL               --------->At4g35610 -YAB1  <---------ALFIN1         ------->TEIL           ----------->HVH21           ---------->DOF2 <   atgtcttccaacacttttagcttcatccacttatgcacctaacgcttcttctctctatatgacacatacaggtggacacatagagggaaagtcagctttt  9291300  Previous    Next  AGI:  At2g21750.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G21740.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71715.1); contains InterPro domain Protein of unknown function DUF1278 (InterPro:IPR010701) Range:  from: 9290447    to: 9290824    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g21760.1    Description:  pre-tRNA. tRNA-Leu (anticodon: GAG) Range:  from: 9291114    to: 9291185    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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