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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                                                      ------>ZmHOX2a(1)
                                                                                      --------->LBD16
                                                                           --------->At4g35610
              --------->ANAC58                                             ----------->RAV1(2)
      <-----------GT1          <---------ATHB12                            <---------At4g35610
  <----------DOF2             ------>MYB46(1)     <---------At4g35610  <-----------HVH21   ---------
-->DAG2       --------->ANAC58------>MYB83<---------ATHB12           <<<<<<<<<SUP   ----------------
-->DOF2    --------->ZAT2  --------->MYB46(3)------->TEIL       ----------->HVH21<----------DOF2----
 
tgagtctttataccagcacgaagtctctgaaccaatcgtctccctatgaatccagttgctccagttactgacactgtcatctgactttcctgaattgaaa  9119400
     <---------MYB59
   >>>>>>>>>MYB2 --------->KAN4(2)     <---------AHL20(2)                           <---------ARR11(3)
-->GT1 ------>MYB83                    <---------YAB1  <-----------GT1              --------->ARR11(3)
->AGL1 ------>MYB46(1)                <---------AHL20(2)                <---------CCA1(2)
------>DOF2     <---------KAN4(1)     --------->AHL20(2)        --------->YAB1  ---------->DOF2
 
aaagaaaaccaaactttgaacattctctatcaactaaacattttaattctcaaactcttaactattttcatacttgtagcttaaaaagatactacaatac  9119500
                                             --------->ANAC46
     --------->LBD16               --------->LBD16
    <---------HSFB2a(2)           --------->HSFB2a(2)
    --------->HSFB2a(2)           <---------HSFB2a(2)                                --------->ANAC58
    <---------ANAC58        --------->ARR11(3)                                       ----------->GT1
    <---------ANAC46        <---------ARR11(3)          ------->TEIL      --------->At4g35610
    <---------ANAC58       <-----------GT1<---------ZAT14                 <---------At4g35610
   <---------LBD16     --------->AHL20(2) --------->ZAT14       <-----------HVH21    --------->ANAC58
 
aagtcttccgggtgaagagattgaaatgaaataccttctgggaactacacagaaccatgaatctccttgtccctggcatctaaaaaccaagtaaaaatcc  9119600
                                     <---------AHL20(2)
                                    <---------AHL20(2)
                             ----------->RAV1(1)
                          --------->ANAC55(2)
                          --------->ANAC55(1)                                         --------->TOE1(2)
                          <---------ANAC55(2)                                      --------->MYB52(1)
                          --------->ANAC58                                        --------->TOE1(2)
                       <---------ATHB12                                          --------->MYB46(3)
                     --------->WOX13(1)            --------->TOE2(3)             <---------MYB52(2)
            <---------YAB1--------->ANAC46        --------->YAB1           --------->LBD16
          --------->YAB1  --------->ANAC58 ------->TEIL                  <---------LBD16       -----
     <---------YAB1<---------ATHB12 --------->AHL20(2)    <----------ID1 --------->SPL7        =====
 
aaaatttgatcattcatgagtaatcaatcacgcaacaaattaaatgaatgttaacataaaaaaaacaaaatttgcatacggagaacgaacgagggactaa  9119700
                                                                                          <---------ANAC46
                                                                                          --------->ALFIN1
                                    <---------MYB46(3)                                 --------->ALFIN1
                                    <------MYB83                                       <---------AtMYB61
                                <---------TGA1a                                 --------->ZAT6
                                <---------O2     --------->At4g35610          <---------DOF5.7(2)
                         ---------->DOF2 <---------At4g35610                --------->DOF5.7(2)
                         =================bZIP_DOF                         --------->TOE1(3)
                     <------ZmHOX2a(1)   <---------ZAT2                    --------->TOE2(3)
   --------->At4g35610  <------ZmHOX2a(1)--------->At4g35610               <-------GAMYB<---------MYB46(3)
--------->At4g35610--------->ALFIN1 <------MYB46(1)                       ------>ZmHOX2a(2)
----->DOF2        <------ZmHOX2a(1)<---------DEAR3(1)         <---------At4g35610      *TSS
==========================================bZIP_DOF            --------->At4g35610   --------->ATHB12
 
aagagcagaagagagagcgaaggaggaggaaagagacgttggtgagcagagaagctccatcgtttcgctgaaactgatcgttaacagtgagtggtggaga  9119800
                  --------->ANAC58                              <---------YAB1
                  --------->ANAC58                            <---------ICU4
                  --------->ANAC46                            <--------HAHB4
                 <---------LBD16                             --------->ICU4
       <---------ANAC46                                      <---------YAB1
    --------->ANAC46                    <------------CBF   <---------ICU4
   <-------TEIL <---------AtLEC2       --------->ATHB12    --------->YAB1
 --------->ARR14(2)                   --------->ICU4      <-------TEIL                          <---
 <---------ARR14(2)           ---------->DOF2  <----------DOF2--------->ATHB51 <---------ZAT6   ----
 
cacatatacgtcgtattttgcacggagacaacttaaaggcccttattgggctttgttgatattcattattaaggcccatttagtcttatttctggtccat  9119900
                                                                                     <---------DEAR4(2)
                                                                                     <---------ORA47(2)
                                                                                     <---------ATERF1(1)
                                                                                     <---------RAP2.3(1)
                                                                                    <---------RAP2.3(2)
                                                                                    <---------RAP2.3(3)
                                                                                    <---------RRTF1(2)
                                                                                <---------MYB46(3)
                                                                               <-----------RAV1(1)
                                                                               <---------AtMYB61
                                                                       <---------DEAR3(1)
                                                                      <------NtERF2 <---------DEAR3(1)
                                                                     <---------ERF1<---------ABI4(1)
                                                                     <---------ORA47(2)          ---
                                                                     <---------RAP2.3(1)         ---
                                                                     ------>NtERF2 --------->SPL7---
                                                                    --------->ATERF1(2)          ---
                                                                    <---------RRTF1(2)           ---
                                                                    <---------RAP2.3(2)          <--
                                                                    <---------DREB2C(2)          ---
                                                                    <---------DEAR3(1)<------NtERF2
                                                                    <---------ANAC46<---------RAP2.6(2)
                                                                    <---------RAP2.3(3)     --------
                                       <------ZmHOX2a(1)            <---------RRTF1(3)------>NtERF2
                                    *TSS                            <---------RAP2.6(2) ------>NtERF2
           <---------WOX13(1)       <------ZmHOX2a(1)               <---------ATERF1(2)<---------ANAC46
          <------------CBF        --------->ALFIN1           <------ZmHOX2a(1) --------->ALFIN1  <--
 <---------AHL20(2)              <------ZmHOX2a(1)     ---------->DOF2--------->ATERF1(1)<------NtERF2
----MYC3 --------->ATHB12      --------->ALFIN1  --------->ALFIN1  --------->ATERF1(1)--------->ATERF1(1)
--->MYC3<---------YAB1  --------->CCA1(2)      --------->ALFIN1  --------->ALFIN1 --------->ALFIN1--
 
gtgtttaatctttgattgaagtctgagagacggagaggaggaggacgagagtgtgtgagaaagaggagatggcggcgatgcagtggtgcggcgcgatgac  9120000
                                                                               --------->ARR14(2)
                                                                              <---------ZAT2
                                                                              --------->ZAT2
                                                                           <---------ZAT14
                                                                           <---------At4g35610
                                                                          --------->ALFIN1
        <---------ICU4                                                  --------->ALFIN1
        --------->YAB1                                                <---------TGA1a
       --------->ICU4   ----------->RAV1(2)                           <---------ANAC46        <-----
       <---------YAB1   --------->At4g35610                           <---------O2            ------
   <---------GLK1(2)   --------->ARR11(3)                             --------->TGA1a    --------->ARR14(2)
-------->HVH21         <---------ARR11(3)                             <---------ANAC58 <------NtERF2
------>ANAC58        ----------->ARR10                                <---------ANAC58<---------DEAR3(2)
------>O2          <---------ZAT18                                  ------>NtERF2 <---------DEAR3(1)
------>TGA1a      <---------MYB52(2)                                --------->LBD16------>NtERF2
------>ANAC58    <---------At4g35610                               --------->ANAC46--------->LBD16
-------TGA1a     <------NtERF2<---------ZAT2                       <---------DEAR3(1)<---------DEAR3(1)
------>ANAC46--------->ANAC46 --------->At4g35610           <---------MYB52(1)<---------At4g35610
--->HVH21  <---------TGA2(2)  <---------At4g35610           --------->DOF5.7(2)<---------ARR14(2)
-------O2 ----------->TGA1    --------->ZAT2               --------->TOE2(3)  --------->At4g35610
------->MYB52(1) --------->At4g35610       <---------DEAR3(1)     <---------LBD16<---------LBD16
 
acgacggattatgatgacgcagcgaacatctgcagctctgaattgttcggcgaggtattcatcgttatctccggcgtgtgcagctccggcggtatcggaa  9120100
                                                                   --------->HSFB2a(2)
                                                                   <---------HSFB2a(2)
       --------->ALFIN1                                <---------SPL7
     <---------ANAC58                                 ------>ZmHOX2a(2)
     <---------ANAC46                                <---------------AtSPL3
     <-----------RAV1(1)                     <-------TEIL--------->SPL7                   <---------WOX13(1)
     <---------ANAC58     <-----------------------TaNAC69(2)   <---------ARR14(2)       --------->ATHB12
 <---------GLK1(1)      <----------ID1      --------->CCA1(2)  --------->GLK1(1)       <---------YAB1
----ARR14(2)       --------->CCA1(2)<----------ID1   --------------->AtSPL3--------->ANAC58
--->ARR14(2)   <------ZmHOX2a(1)---------->DOF2    <------ZmHOX2a(1)       --------->ANAC58       --
 
atggatttgtgtgggagaggagataagaagacgaagaaagggaaaagattcaaaggatcgtacgggaattcgagagggaagaaacagaagatgattgaga  9120200
                      <---------TOE1(2)
               <---------At4g35610                           ------->TEIL
        --------->ANAC58<-----------ARR10               --------->At4g35610                     ----
        --------->ANAC58--------->AGP1                  <---------At4g35610           <----------DOF2
 ---------->DOF2      --------->LBD16        <----------DOF2<---------GLK1(2)       ------>ZmHOX2a(1)
------->GLK1(2)--------->At4g35610  ---------->ID1      ----------->RAV1(2)     <-----------GT1-----
 
gaatcaaagacaagcttgagcttcccaggtctactccttggcctcttcctttcaagctcatctgaatctcttgttaggggttttctcctcttttgccaac  9120300
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AGI:  At2g21280.1   
Description:  GC1 (GIANT CHLOROPLAST 1); binding / catalytic/ coenzyme binding. similar to terpene cyclase/mutase-related [Arabidopsis thaliana] (TAIR:AT4G33360.1); similar to terpene cyclase/mutase-related [Arabidopsis thaliana] (TAIR:AT4G33360.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO47253.1); contains InterPro domain Region of unknown function DUF1731 (InterPro:IPR013549); contains InterPro domain Conserved hypothetical protein, YfcH (InterPro:IPR010099); contains InterPro domain NAD-dependent epimerase/dehydratase; (InterPro:IPR001509); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040)
Range:  from: 9117394    to: 9119788    Orientation: Reverse
Links:  TAIR  MIPS 
 
AGI:  At2g21290.1   
Description:  Identical to 30S ribosomal protein S31, mitochondrial precursor [Arabidopsis Thaliana] (GB:Q9SJU8); similar to unnamed protein product [Vitis vinifera] (GB:CAO47252.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN75923.1)
Range:  from: 9119937    to: 9120411    Orientation: Forward
Links:  TAIR  MIPS 
 
 
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