Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                               --------                                                                                             --------                                                                                            ---------                                                                                           <---------ATHB12                                  --------->ANAC55(2)                      --------->ZAT14 <<<<<<<<<ARR1                                  <---------ANAC55(2)                      <---------ZAT14 <<<<<<<<<ARR2                                --------->AHL20(2)                       --------->ANAC46--------->YAB1                             --------->WOX13(1)                          =================bZIP_DOF --------ICU4             --------->ANAC58                               --------->TGA1a --------->WOX13(1) ----->ANAC58             --------->ANAC58                           --------->ANAC58   --------->MYB46(3) ----->ANAC58            --------->DAG2                       --------->LBD16  ---------->DOF2 ---->DOF2              ---------->DOF2             <-----------GT1  --------->ANAC58 ----------->RAV1(1)   agcattacatagaatgagcgaaaacataaagcaattacatactgaaacttgttatcacccttcccagagacactcacttcacaaagcccaacaatcatac  8981200                                    <---------ATHB12                                  --------->WOX13(1)    --------->ANAC46            <---------ATHB12    --------->ANAC58        <---------ATHB12                  <---------AtLEC2                     <-    --------->ANAC58  <---------ANAC58                  <---------ANAC46                      <------ ->TOE2(2)    ---------->DOF2 --------->WOX13(1)        <---------ANAC58   --------->DAG2     <------ ->TOE1(2)----------->GT1 --------->WOX13(1)            <---------ANAC58  ---------->DOF2     <------ >YAB1---------->DOF2 <---------ANAC58  <------ZmHOX2a(2)    --------->ZAT18             <---------ICU4   gaacacaagaaagcgtaaaagtatgcgtaaatcaatcaatcgatcaactacgtttcttccttgtgcattgaaaccgaaaagtcattcccaagaattgcga  8981300                                                                                                -----                                                                                               ------                                                                                             --------                                                                                       <---------At4g35610                                                                                     <-----------RAV1(2)                                                                                    --------->LBD16                                                                                    <---------LBD16            --------->ANAC46                                                      ------>ZmHOX2a(2)            --------->ANAC55(2)                                                  <------ZmHOX2a(2)         <-------TEIL  <------ZmHOX2a(1)                                        <---------ARR14(2)      <---------ANAC55(2)                                                       --------->ARR11(3) -- --------->ZAT6        ========================HOX2a_HOX2a                      <---------ARR11(3)--- ----------GT1   --------->REM1(1)      <------ZmHOX2a(2)                       --------->ARR14(2)<-- ---ANAC58  --------->ANAC55(1)       --------->At4g35610                     ----------->ARR10<----- ---ANAC58  --------->ANAC58     <---------GLK1(1)                        --------->DAG2    --------- ---ANAC46  --------->ANAC58     --------->GLK1(1)                       ---------->DOF2    <--------   gtaacactacgtacacgttacaacaggaatgtgagaaatcagatcagaaacaatgcgattcaacaaaatcgaataaaaagtagatccccagatgatgatg  8981400 --------->ICU4 <---------YAB1 ---->YAB1 --->ICU4 ->YAB1 ------->YAB1                      --------->AHL20(2)                                <---------MYB52(1) ------>ICU4                    <------ZmHOX2a(1)  ---------->DOF2                  --------->At5g28300 -------YAB1                ---------->DOF2      <---------YAB1                --------->ZAT14  ----- ----YAB1                --------->LBD16     <-----------TGA1         <---------ANAC58          <---- >ICU4                 <-----------------AGL1<-----------HVH21        <---------ANAC58      <-------- -YAB1                <---------At5g28300   --------->ANAC46       <--------P  <---------ZAT14 ------   atgatgatgagattgaatcaagcttaccgcaaaaggattaatttctccgtcatcaaaggaatgagactggtagcgagacattgcaccgttactcagcaaa  8981500                                                                             <---------ANAC58                                                                             <---------ANAC46                                                                             <---------ANAC58                                                                            --------->ZAT18                      --------->DEAR3(1)                                    <---------ZAT18                     --------->ANAC46                                      --------->ALFIN1                <------ZmHOX2a(2)                                         <---------RAP2.3(3)            --------->ANAC58                                             <---------ANAC46            --------->ANAC46                                             <---------ANAC58            --------->ANAC55(1)                                          <---------ANAC58            --------->ANAC55(2)                                   ------------>CBF         --------->ZAT14                                          *TSS  <---------MYB46(3)         <---------REM1(2)                                       --------->ANAC58         <---------ZAT14                                         --------->ANAC58                   - ---->ARR14(2) <-----------ARR10                              <---------REM1(1)               <------ -----ARR14(2) <-----------HVH21                            --------->At4g35610             --------- -At4g35610<---------LBD16                                  <---------At4g35610 <----------DOF2 <---- --->GLK1(1)--------->ANAC58                         --------->ATHB12<------------CBF  ----------->GT1   tccaatctctctacacggatcacaccgagcgagagagagagagagagagagagagcgattggagatgaagcaattgggtgcgcgttttagagtaataagg  8981600                                                         ------>MYB83                                                         ------>MYB46(1)                                                        ----------->RAV1(1)                                                  <---------MYB55(2)                              ---         <------NtERF2                            --------->MYB46(3)                              <--        ------>NtERF2                             <---------MYB111(2)             <---------ARR14(2)       <---------ANAC46                           <---------MYB52(2)          --------->YAB1   ------       <---------ANAC58                          ------>MYB46(1)      ----------->GT1         <------       <---------ANAC58                          ------>MYB83     --------->ZAT6  --------->GLK1(2)      <<<<<<<<<E2Fd                             ----------->RAV1(1)--------->TOE2(3)          ------- -------->ALFIN1         --------->LBD16       ------->GAMYB  --------->AHL20(2)  --------->ARR11(3) ---TOE2(3)            <---------LBD16        --------->MYB46(3) <---------TOE2(3)--------->ARR14(2) >ICU4<<<<<<<<<E2Fc--------->KAN4(2)  --------->LBD16 --------->MYB46(3)     ----------->GT1 -------- --ZmHOX2a(1)     <----------TaMYB80<---------LBD16------->GAMYB<-----------GT1   <---------ARR11(3)-   aagtgtttggcgcgtctgggttatacccggttttctaatccggagataaccaacaaaccaacattttaacattagtaaaatgaaaatctacaaaaattaa  8981700         <---------PCF5    -------->HAHB4    <---------ICU4               --------->YAB1    --------->YAB1        --------->AHL20(2)    --------->ATHB12      <---------AHL20(2)   --------->ICU4        <---------AHL20(2)   <---------YAB1    <---------AHL20(1) <---------ICU4      --------->AHL20(1) -------->HAHB4      --------->AHL20(2)   <---------AHL20(2)                   --------->ARR11(3) --------->YAB1      <---------AHL20(2)   --------->AHL20(2)          <---------------AGL15 ------>YAB1      <---------AHL20(1)   --------->YAB1             <---------MYB52(1) -------ICU4      --------->AHL20(2)  --------->ICU4          ----------->RAV1(1) --->YAB1<---------PCF2  --------->AHL20(2)               --------->DAG2       <---------ARR11(3) ---AHL20(2)      --------->AHL20(1)  ----------->GT1    ---------->DOF2   ---------->DOF2 -->AHL20(2)      <---------AHL20(2)  <---------YAB1 --------->YAB1   <----------DOF2        <------- ->AHL20(2)     <---------AHL20(1)  --------->YAB1<---------HSFB2a(2) --------------->AGL15  -------- -------->ICU4 --------->YAB1<---------AHL20(2)   --------->HSFB2a(2) <---------DAG2     <---------AHL20(2)   taataatgatgggaccataatattttattaatttatagtgatgataaattttctataaaaaaagcaccattactttataaagatgtttgttttaattttt  8981800                         <---------ATHB51                         --------->AHL20(2)                             --------->AHL20(2)                         <---------AHL20(2)                             --------->AHL20(1)         --                         --------->ICU4                                 <---------AHL20(2)--------->ATHB12 --AHL20(2)         ----------->GT1            <---------YAB1    ----------->GT1     --------->AHL20(2) ->AHL20(2)       --------->At4g35610       <---------YAB1 --------->YAB1<---------AHL20(2)       ---   taaaattttagaaaaatatgagttgaaataattcaatttggatgttataatttttgtaatatcagaattgtaaatttaatatttcaaaaaaatcatttgg  8981900           --------->ATHB51           <------------ATHB5           --------->YAB1           -------->ATHB1           <--------ATHB1           <---------ICU4          <---------YAB1          <---------ATHB51          <---------ATHB12                               <---------YAB1          --------->ICU4                                 <---------WOX13(1)     --------->YAB1                             <---------TOE2(3) ---------->DOF2                         --------->AHL20(2)--------->YAB1 ------->At5g28300                   <-------TEIL      --------->ATHB12      --------->ZAT18 -------->GT1                     --------->CCA1(2)   <---------YAB1         <---------ZAT18------->TEIL   cagtaaatcacaataattgtatcatttatacaaatgatatacataaatttaagtttatgattaataacttcaactatagtagactattggaatgaacatg  8982000                                <---------ICU4                                --------->MYB52(1)                               <---------ATHB51                                 ----------->GT1                               <---------AHL20(2)                            <------ZmHOX2a(1)                  --------->ARR14(2)                                       <---------TOE1(2)                  <---------ARR14(2)                                     --------->TOE1(2)             ----------->GT1  --------->AHL20(1)                        --------->YAB1       --------         --------->DAG2      --------->YAB1                <-----------GT1 <---------TOE2(2)---------        ---------->DOF2    --------->AHL20(2)       ----------->GT1    <---------YAB1     --------->ANAC46   atgcataccaaaaagttgaaaatttgcaaaaaaataatggctaattgtattacgaagttataaacgatatactatcataggatagtttaaaaacacaaca  8982100  Previous    Next  AGI:  At2g20840.1    Description:  secretory carrier membrane protein (SCAMP) family protein. Identical to Secretory carrier-associated membrane protein 1 (SCAMP1) [Arabidopsis Thaliana] (GB:Q9SKT3); similar to secretory carrier membrane protein (SCAMP) family protein [Arabidopsis thaliana] (TAIR:AT1G03550.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24113.1); contains InterPro domain SCAMP; (InterPro:IPR007273) Range:  from: 8978793    to: 8981566    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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