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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                                    --------->DAG2
                                                                ------>ZmHOX2a(2)
                                                              --------->ARR14(2)
                                                          <---------LBD16
                                                         ------>ZmHOX2a(1)
                                      ==========================HOX2a_HOX2a                        <
                                      ------>ZmHOX2a(2)  <---------LBD16                           <
        <---------At4g35610     --------->TOE2(3)        ==============HOX2a_HOX2a                 -
        --------->At4g35610   <---------YAB1             =============HOX2a_HOX2a                <--
    <---------ATHB12       <------ZmHOX2a(2)       <-------TEIL<------ZmHOX2a(2)             -------
-----TEIL                  =====================================HOX2a_HOX2a   <---------AHL20(2) ---
--->CCA1(2)               <---------ARR11(3)    <---------At4g35610---------->DOF2      --------->ANAC58
--->At4g35610             --------->ARR11(3)<----------DOF2   <---------ARR14(2)        --------->ANAC58
 
tgcacaaatgatgctgaatttgactctgagatcatccttgatcccgtctttagcttcgtcctcgggatccaaaagcgggattttatcgagcaagacatgg  8977300
          <---------ANAC58
      <---------At4g35610          --------->REM1(2)
<---------ICU4                    --------->ALFIN1                                                 -
-------->ATHB1                   xxxxxxxxxxxxxxx>smallRNA(fl3)                                     -
--------->ATHB12        <------ZmHOX2a(1)     <---------LBD16                                   <---
---------YAB1           ========================HOX2a_HOX2a      ---------->DOF2                ----
---------ATHB12   <---------At4g35610    <------ZmHOX2a(2)     ---------->DOF2                  ----
-------->ICU4     <---------ZAT2<---------ANAC46     <---------ZAT2 --------->At4g35610      <------
-------GLK1(1)    --------->ZAT2<---------ANAC58     --------->At4g35610                   ---------
-->AtLEC2 <---------ANAC58      <---------ANAC58     <---------At4g35610     --------->MYB46(3) <---
------>GLK1(1)    --------->At4g35610  <------ZmHOX2a(1)  --------->GLK1(1) -------->P --------->GLK1(2)
 
aaatcattgagatgcttatggagctgaggagagaagcgtgtaggatcaatacggagagctgaattccaaagagcagagcaacctctgtagaatccaatca  8977400
       --------->HSFB2a(2)
       <---------HSFB2a(2)
 ----------->RAV1(2)
-------->ANAC58                               --------->MYB46(3)
-------->ANAC58                            <---------REM1(2)<---------ARR14(3)
------ZAT2                        <---------ANAC58          --------->ARR14(3)
----->ZAT2                        <---------ANAC58          --------->ARR11(3)
----->At4g35610              <---------At4g35610            <---------ARR11(3)
---ATHB12                    --------->At4g35610   ----------->HVH21
>WOX13(1)                  <-----------RAV1(2)--------->ANAC46                                    --
------At4g35610--------->LBD16 ----------->HVH21--------->MYB52(1)        ------->GAMYB           <-
 
gctcgcctgtctcgaacccgagtttcaaacccagatgacgagcgtcttcacgaccggacacaagaccttcttcgtaaccctcatcgaagccttgttgaac  8977500
                --------->ANAC58
                --------->ANAC46 <---------HSFB2a(1)
                --------->ANAC58--------->ARR11(3)
               <---------------------WRI1
             --------->TOE1(2)  <---------ARR11(3)
            --------->ANAC46    <---------ARR14(2)                                             <----
         <---------REM1(2)      --------->ARR14(2)                        <---------WOX13(1)  ------
      ------>ZmHOX2a(1)        --------->GLK1(1)                         >>>>>>>>>ARR2        <-----
----->MYC3  --------->ANAC58   <---------GLK1(1)                        --------->ATHB12  ----------
------MYC3  --------->ANAC58 <------ZmHOX2a(1)                   <----------DOF2  <---------TOE2(3)
 
atgtgtctcctctaaacgcacgatacaatcgaggaaatcttcgttcagaccagaactcatagaagaaactttgtttgattgtttttatgttgacaaagat  8977600
                                                        ---------->DOF2
                                                       <------ZmHOX2a(1)                           -
                             =================================HOX2a_HOX2a                          <
    --------->ANAC58         =======================HOX2a_HOX2a                                   --
    --------->ANAC58       <---------AGP1    <------ZmHOX2a(1)                                  <---
--ZmHOX2a(2)            ============================HOX2a_HOX2a                                 <---
--->ARR11(3)            <------ZmHOX2a(2)  --------->ANAC58                                     ----
----ARR11(3)  --------->At5g28300          --------->ANAC58                                     ----
>DOF2        ----------->GT1 ------>ZmHOX2a(2)  <---------SPL7   <-----------GT1        <---------GLK1(2)
 
caagaacaagctaaaacggtaatagagatcgatctgatatacagacaaggacgaacgaggaaagagattaacaaaactcaccagttcgatagaatttgca  8977700
       --------->MYB52(1)
      <---------AHL20(2)
-------->At4g35610               --------->AHL20(2)
---------At4g35610            --------->YAB1<---------ARR14(2)
--------->RAV1(1)        ----------->GT1    <---------ZAT14
------At4g35610     ---------->DOF2     <---------TOE2(3)
------ZAT2   <---------At4g35610--------->AHL20(2)                                           -------
----->At4g35610   <---------YAB1<---------AHL20(2)               <---------ATHB12           ========
----->ZAT2*TSS --------->ALFIN1<---------AHL20(1)            ------------>CBF               <------ZmHOX2a(2)
 
gcagcagaattaatggaggtgatgaaagttgtaaaataattttagggtatactatttgataatggacaatgaatacaaaacttgggccttcttggatcat  8977800
                               ---------->DOF2
                           <---------ARR11(3)
                     ------>ZmHOX2a(1)                                                          <---
                     ===============HOX2a_HOX2a                                           ==========
                     ==============HOX2a_HOX2a                                       <---------ANAC46
                ------->GAMYB------>ZmHOX2a(2)                                      <---------LBD16
               <------------AtMYB77--------->MYB52(1)                <---------At4g35610  <------ZmHOX2a(2)
      ------------>CBF     --------->ARR11(3)                        --------->At4g35610<---------PCF5
-->YAB1      <-----------GT1<------ZmHOX2a(2)                     ---------->DOF2  --------->ALFIN1
============================HOX2a_HOX2a                       ----------->GT1     --------->ALFIN1
 
aaacttgggcccaatataactgtcctgagggatctaaagaacgggagagagagaagagcattgaatggtgaaagctgtatagcaagttgggggatcacgt  8977900
      <---------ARR14(2)
      --------->ARR14(2)
     <----------DOF2                     <---------ATHB12
    <----------DOF2                     ------>MYB46(1)
  ------->TEIL     ------>ZmHOX2a(1)    ------>MYB83
------->MYC3    ---------->ID1        <---------MYB46(2)
<-------MYC3<----------DOF2        <-----------GT1                     <------ZmHOX2a(1)
----TEIL    <---------DAG2--------->ALFIN1                         ---------->DOF2
==========================HOX2a_HOX2a <---------MYB59    <---------ANAC46<------ZmHOX2a(2)        --
 
tcatgtgcctttctgctttttcctattaagtggtgttcttaccaaacatgttttgaagagacttgtaagtaaaaggatcacttgcattagtcagaaacag  8978000
                                                       --------->ANAC58
                                                       --------->ANAC46
                                                       --------->ANAC58
                                                     ---------->DOF2
                                                    <---------ATHB12
                                                   --------->ANAC58
                                                   --------->ANAC58
                                                  --------->WOX13(1)         <---------ANAC58
                                               --------->ANAC58              <---------ANAC46
                                               --------->ANAC58         --------->ANAC58
                       --------->At4g35610    --------->MYB59           --------->ANAC58
--------->GT1      --------->TOE2(3)     ---------->DOF2  ----------->RAV1(1)<---------ANAC58-------
 
agagataaatgaaaaacaaaaacattagctaagacttaagagtctaaagtaggcaatcaagcgacatacaatggcaagtagcttgttggaaaaaaaaaac  8978100
                                                                     ----------->HVH21
                                                                   --------->CCA1(2)
                                                                  <---------ARR14(2)
                                                                  --------->ARR14(2)
                                                                ----------->ARR10
                                                              --------->LBD16
                                                         <---------ZAT2
                             --------->At4g35610         <---------ZAT14                         ---
                             <---------At4g35610         --------->At4g35610                     ---
                          <-------TEIL                   <---------ABI4(2)                     <----
                       <---------MYB46(3)                <---------At4g35610                <-------
                       <------MYB46(1)               <------ZmHOX2a(1)             <----------DOF2
    --------->AHL20(2) <------MYB83          --------->ATHB12--------->DEAR3(1)   <---------ANAC58
-->MYB52(1)        <---------MYB46(3)       <---------YAB1<---------ALFIN1        <---------ANAC58--
 
gaatgaattaaaacaaaaaacgttgttggttcatcagactcagtggtatgatttgaggacagcaccgcagatatgacagacgatagctttccaagctttg  8978200
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AGI:  At2g20830.1   
Description:  folic acid binding / transferase. similar to formiminotransferase-cyclodeaminase-like [Oryza sativa (japonica cultivar-group)] (GB:BAA83349.1); contains InterPro domain Formiminotransferase; (InterPro:IPR004227); contains InterPro domain Formiminotransferase, N-terminal; (InterPro:IPR012886)
Range:  from: 8975292    to: 8977711    Orientation: Reverse
Links:  TAIR  MIPS 
 
AGI:  At2g20835.1   
Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G15534.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39221.1)
Range:  from: 8977967    to: 8978384    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
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