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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<---------
<---------
ARR14(2)
--------->
ARR14(2)
------->
TEIL
--------->
ANAC55(2)
--------->
ANAC46
--------->
GLK1(2)
------>
MYB83
--------->
ANAC58
<---------
ARR14(2)
------>
MYB46(1)
--------->
DAG2
<---------
ANAC55(2)
>>>>>>>>>
TBF1
--------->
DEAR3(1)
---------->
DOF2
--------->
MYB52(1)
>>>>>>>>>
TBF1
--------->
AHL20(2)
<xxxxxxxxxxxxxxxx
smallRNA(i)
->
DOF2
--------->
ARR14(2)
--------->
DEAR3(2)
<---------
TOE2(3)
--------->
ANAC58
agaagaagaagaatccgattatataagtaaaaccgac
cgtagccgagaagaacattgttcaaggatgcaaaaaaggcacaagccataacgtattttctgg
8956100
<------
NtERF2
<-
<------
NtERF2
---
<-----------
HVH21
----
--------->
ANAC46
----
--------->
LBD16
----
------>
NtERF2
<----
<---------
ALFIN1
----------->
HVH21
<---------
LBD16
--------->
ANAC46
--------->
TOE1(2)
<---------
DEAR3(1)
<---------
ETT(1)
<---------
YAB1
------>
ZmHOX2a(1)
<---------
YAB1
----------->
RAV1(1)
<----------
DOF2
--------->
ARR14(2)
--------->
ANAC55(2)
-------
--
GT1
--------->
At4g35610
<---------
ARR14(2)
<---------
ANAC55(2)
--------
ttctactgtttctagcctctgcttcacgatgattctgcgattcctccgcgtcggagtccattctctgatacttattcttcttatttccgacagagaccgc
8956200
<---------
GLK1(2)
--------->
ARR11(3)
<---------
MYB55(2)
<---------
MYB111(1)
<---------
MYB59
<---------
MYB46(2)
------>
NtERF2
<---------
ARR11(3)
--------->
ANAC46
--------->
HSFB2a(2)
--------->
DEAR3(1)
<---------
ARR14(2)
------->
GAMYB
------->
GAMYB
--------->
DREB2C(2)
--------->
ARR14(2)
--------->
RAP2.6(2)
<---------
HSFB2a(1)
--------->
RAP2.3(1)
<---------
HSFC1(2)
<------
NtERF2
--------->
MYB46(3)
<---------
MYB55(2)
<---------
HSFB2a(2)
--------->
MYB46(3)
--------->
ANAC46
--------->
ANAC46
------>
MYB83
--------->
GLK1(2)
--------->
ANAC58
------>
MYB46(1)
--------->
ALFIN1
--------->
ANAC58
--------->
MYB55(1)
--------->
DEAR3(1)
<---------
AtMYB61
-----
NtERF2
--------->
MYB46(3)
--------->
HSFB2a(1)
<----------
CDC5
<---------
At4g35610
------>
LBD16
--------->
ATERF1(1)
----------->
ARR10
------>
NtERF2
<---------
ZAT2
----->
RAP2.3(2)
<---------
MYB111(2)
--------->
LBD16
<-----------
RAV1(2)
----->
RAP2.6(2)
--------->
MYB46(3)
--------->
DEAR3(1)
<---------
ZAT18
----->
LBD16
<---------
ATERF1(1)
--------->
LBD16
<---------
At4g35610
--------->
At4g35610
-----
LBD16
<---------
ALFIN1
--------->
AtMYB61
--------->
At4g35610
<---------
At4g35610
<-----
-->
DEAR3(1)
------>
NtERF2
-------->
P
--------->
HSFC1(2)
--------->
SPL7
--------->
ZAT2
<-----------
->
DEAR3(2)
--------->
DEAR3(1)
<---------
LBD16
<---------
ICU4
------>
NtERF2
<---------
ZAT2
<---------
ANAC46
cggaaaacccgagccaccgccattaccaacctccggaagattcttcatcat
ctccctccgccgaggcttcagacagcagactcaggtggtgtctgttttc
8956300
--------->
LBD16
<---------
LBD16
------->
TEIL
----------->
HVH21
------>
ZmHOX2a(2)
<------
ZmHOX2a(2)
<---------
GLK1(1)
--------->
CCA1(2)
<---------
ARR11(3)
<---------
AGP1
--------->
ARR14(2)
--------->
AGP1
--------->
ARR11(3)
--------->
ARR14(2)
<---------
AGP1
<---------
ARR11(3)
<---------
ARR14(2)
<---------
ARR14(2)
<---------
CCA1(2)
--------->
ARR11(3)
---------->
DOF2
<-----------
ARR10
=======================
HOX2a_HOX2a
<---------
CCA1(2)
======================
HOX2a_HOX2a
----------->
ARR10
---------->
DOF2
<------
ZmHOX2a(1)
<---------
LBD16
--------->
At4g35610
----
LBD16
<---------
TOE2(3)
<------
ZmHOX2a(2)
<---------
At4g35610
------
AGL1
--------->
MYB52(1)
<---------
ANAC46
<----------
DOF2
------>
ZmHOX2a(2)
<---
ggaaaaaaagagaattcagacaacgacttgaggaagaaagtcgtagatctcggaagaagggctttagatgaccagatctgaaccggagagacttcttaga
8956400
----
----
----
-----
<---------
ANAC55(1)
<-----------------
AG
<---------
ANAC55(2)
------>
MYB46(1)
--------->
ANAC55(2)
------>
MYB83
==================================================================
<---------
MYB59
<-----------------
AGL1
<---------
ANAC58
----------------->
AGL1
<---------
TOE2(3)
<---------
ANAC58
<-----------
GT1
<---------
HSFC1(2)
--------->
ZAT6
>>>>>>>>>>
WRKY26
--------->
HSFC1(2)
<---------
YAB1
>>>>>>>>>>
WRKY43
<---------
HSFB2a(1)
<---------
TOE2(3)
------
GLK1(1)
>>>>>>>>>>
WRKY38
--------->
HSFB2a(1)
---------->
DOF2
------>
ZmHOX2a(1)
*
TSS
aatctcatcgtctctatttgaccaaattggtggaattttctaatgaggtaatccaattttcaaaagacaacttgactccttccattaacattac
gtttca
8956500
--------->
AHL20(1)
<---------
AHL20(1)
<---------
AHL20(2)
--------->
AHL20(2)
<---------
AHL20(2)
--------->
ICU4
<---------
CCA1(1)
<---------
AHL20(2)
<---------
RVE1(1)
<---------
RVE1(1)
--------->
ARR11(3)
--
<------
ZmHOX2a(1)
--------->
AHL20(1)
<-
----->
ANAC58
----------->
GT1
<---------
ARR11(3)
<---------
YAB1
------
----->
ANAC58
<----------
DOF2
--------->
DAG2
<---------
ARR11(3)
<-----
----->
ANAC46
<-----------
GT1
---------->
DOF2
--------->
ARR11(3)
----------->
GT1
---------->
AGL15
--------->
TOE2(3)
<---------
AHL20(1)
<---------
TOE2(3)
<---------
TOE2(3)
===========
MADS_MADS
---------->
DOF2
----------->
ARR10
--------->
AHL20(2)
<---------
TOE1(3)
agaaataggattttttttcttttcttaaagcgtaaaaaaagttggaaagatatttaagaacttattaaattaagatagattagagttttcaaggtaataa
8956600
<---------
ALFIN1
--------->
ANAC58
<---------
AHL20(2)
--------->
At4g35610
--------->
AHL20(2)
----
<---------
MYB52(1)
<---------
AHL20(2)
<----
<---------
At4g35610
---------->
DOF2
--------->
AHL20(2)
<--------
------->
At4g35610
--------->
ANAC58
--------->
AHL20(2)
--------->
TOE2(3)
--------
At4g35610
--------->
ZAT18
<------------
CBF
<---------
DOF5.7(2)
--->
MYB52(1)
<---------
ZAT18
--------->
ATHB12
--------->
WOX13(1)
<-------
GAMYB
<-
------
GT1
<---------
At4g35610
<---------
AHL20(2)
<---------
ANAC46
--------->
TOE1(3)
cagctcatctgttagcttagcacacactcttaaaaggcatgaaaacatttattgaaaactaaataaatcagggtttcgagtttggacagttaacctttat
8956700
<-------
GAMYB
--------->
MYB55(2)
<---------
MYB46(3)
----------->
GT1
<---------
MYB52(1)
<-------
GAMYB
<---------
DEAR3(2)
<---------
DEAR3(1)
<---------
MYB46(3)
<---------
DREB2C(2)
<---------
DEAR4(1)
<-----------
HVH21
----------->
HVH21
<-----------
RAV1(1)
<---------
ANAC58
------>
ZmHOX2a(2)
--------->
At4g35610
<------
ZmHOX2a(2)
<---------
At4g35610
--------->
AGP1
--------->
KAN4(2)
<------
NtERF2
--------->
ARR14(2)
--------->
ZAT2
<---------
ARR14(2)
--------->
AHL20(2)
<---------
ZAT2
--------->
ARR11(3)
<-----
----->
YAB1
<<<<<<<<<<<<<<<<<
LFY
<---------
ARR11(3)
<---------
ZAT14
-----
YAB1
>>>>>>>>>>>>>>>>>
LFY
<---------
GLK1(1)
--------->
ATHB12
<------
--
DOF2
--------->
MYB46(3)
<---------
YAB1
<---------
At1g77200
--------->
ZAT14
--
--------
YAB1
<-----------
GT1
<---------
ANAC58
----------->
ARR10
<---------
ZAT2
>>>>>>>>>
SUP
t
atgaaaaaaatggaattaacctccaatggcagcttgctccctatgaatgagatctgtcggtggttattccaagctcattggaactacagagacagtgtc
8956800
--------->
MYB46(3)
----------->
RAV1(1)
<---------
ANAC58
<---------
ANAC58
--------->
O2
<---------
O2
===========================
bZIP_DOF
--------->
TGA1a
--------->
ATHB12
<---------
ANAC46
<---------
AHL20(2)
<---------
TGA1a
--------->
AHL20(2)
<---------
bZIP60(2)
<---------
AHL20(2)
<---
<-----------------------
TaNAC69(2)
------
----
YAB1
--------->
REM1(1)
<---------
WOX13(1)
--------->
TOE2(2)
-----
HVH21
--------->
GLK1(2)
----------->
GT1
--------->
TOE2(3)
--------->
HVH21
<----------
DOF2
<<<<<<<<<<
GT-3b
--------->
AHL20(2)
--------->
TOE1(2)
attgacgtggcaacaacaatctttaaattgattgatatttttcttctaattttgtaa
tttcataaaatacagacctcatattgctgcaaaccttggatta
8956900
--------->
ARR11(3)
--------------->
AGL15
<---------------
AGL15
<---------
YAB1
===================================
MADS_MADS
<---------
ICU4
<-----------------
AGL3
-------->
HAHB4
----------->
GT1
--------------->
AGL15
--------->
YAB1
--------->
At4g35610
<---------------
AGL15
--------->
REM1(2)
<---------
At4g35610
--------->
STY1(2)
<---------
ANAC58
<----------
DOF2
----------------->
AGL2
<----------
DOF2
<---------
ATHB51
<---------
DAG2
<-----------
GT1
--------------->
AGL15
<---------
ANAC46
------
YAB1
--------->
ZAT2
<---------
ARR11(3)
<---------
ARR11(3)
--------->
ICU4
--->
YAB1
<---------
ZAT2
<---------
CCA1(2)
<---------------
AGL15
<---------
ANAC58
<<<<<<<<<<<<<
taatctcctttatgagctggatatatactatatctagatagcattctctatatagagcaatttctttcttaggcttgtagactaattatgaaacagtggc
8957000
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AGI:
At2g20780.1
Description:
mannitol transporter, putative. Identical to Probable polyol transporter 4 (PLT4) [Arabidopsis Thaliana] (GB:Q0WUU6;GB:Q9SKT9); similar to ATPLT5 (POLYOL TRANSPORTER 5), D-ribose transmembrane transporter/ D-xylose transmembrane transporter/ carbohydrate transmembrane transporter/ galactose transmembrane transporter/ glucose transmembrane transporter/ glycerol transmembrane transporter/ hydrogen:sugar symporter/ mannitol transmembrane transporter/ monosaccharide transmembrane transporter/ myo-inositol transmembrane transporter/ sorbitol transmembrane transporter/ sugar:hydrogen ion symporter [Arabidopsis thaliana] (TAIR:AT3G18830.1); similar
Range:
from: 8954323
to: 8956494
Orientation: Reverse
Links:
TAIR
MIPS
AGI:
At2g20784.1
Description:
unknown protein
Range:
from: 8956702
to: 8956857
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.
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