Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                     --------->At4g35610                 --------->MYB46(3)                --------->ZAT2                --------->ANAC58           <------ZmHOX2a(2)              --------->MYB46(3)          <---------ARR11(3)            --------->ANAC58              <-----------ARR10       --------->DEAR3(2)<------NtERF2  --------->ANAC58                        --------->ARR11(3)   --------->ZAT18     <---------ORA47(2)  --------->ANAC58  ------>MYB83      <------ZmHOX2a(1)       ------>ZmHOX2a(2)   <---------DEAR3(1) --------->WOX13(1) ------>MYB46(1)   ===============================HOX2a_HOX2a  <---------DEAR4(1) ------->WRKY18(1)------->GAMYB       ==============================HOX2a_HOX2a  <---------ORA47(1) ---------HVH21 --------->ANAC58    <---------TOE2(3)        <------ZmHOX2a(2)  <-----------HVH21 <-- ->ATHB12   --------->ANAC58   --------->ZAT6   <---------At4g35610--------->DEAR3(1)             <--   ggtcaagcaatcgcaaacaaccaagcgttcttaacactgaggaagatcgaagcagctagagagatcgcacagaccatctctaggtcggcgaacaaggttt  8850800                    <---------ANAC58                 <---------MYB52(1)             <------ZmHOX2a(2)            --------->ARR14(2)            <---------ARR11(3)            <---------ARR14(2)                                                        ----------->RAV1(1)            --------->ARR11(3) --------->ANAC58                                      --------->ANAC58           ------->GAMYB       --------->ANAC46                                      --------->ANAC46         <---------TOE2(3)  ------>MYB46(1)                                        --------->AtMYB61     <----------DOF2<---------ANAC58                                            <-----------GT1   --------->At4g35610      ------>MYB83                                  --------->ICU4   <---------At4g35610      -------->P                                    <---------YAB1     <------- -------ANAC58 <-----------RAV1(1)     ------->TEIL                     --------->CCA1(2)    -------- -------ANAC58------>ZmHOX2a(2)--------->ANAC58 ----------->HVH21     --------->YAB1 --------->ANAC58   acttgagctctaacgatctgttgcttaacctacaggctatggaccttgatgtgaagccgaagaagtagagaatgatatgattaaaccacaccagagctct  8850900                          --------->ARR14(2)                          <---------GLK1(2)                          <---------ARR14(2)                       --------->ANAC46                       --------->ANAC58                       --------->ANAC55(2)              <-----------GT1           <---------ARR14(2)        --------->YAB1 --------->ANAC58                                                    <---------  --------->TOE2(3)   <---------LBD16                                           <---------ANAC58  --------->HSFB2a(2)<-----------GT1                                            <---------ANAC58  --------->YAB1     --------->MYB52(1)    --------->CCA1(2)                   <---------TOE1(2) --ARR11(3)<---------TOE1(2)          ---------->DOF2                       <---------ANAC58 ->ARR11(3)--------->ARR14(2)       --------->AtMYB61    ----------->GT1    <---------ANAC58   <-----   tcttccataatcgtattttcaattcacggattcttagaccaaaagctatgagttctatcttgtgaatttcagacactatcgtgcgtttgtagtctttctt  8851000                                                             --------->YAB1                                                            --------->ICU4                                                          --------->YAB1                                                          -------->HAHB4                                                          <---------ICU4                          <--     <------ZmHOX2a(2)     <---------TOE2(3)             --------->ICU4                          ----    --------->ARR11(3) <---------ARR11(3)                <---------ATHB51   ----------->GT1      <---   --------->At4g35610 --------->ARR11(3)           <------MYB46(1)      <---------ZAT2      -------- -DOF2             ---------->DOF2                  <------MYB83         --------->ZAT2 --------->At5g28300 -----DOF2    ---------->DOF2     <-----------GT1   ----------->GT1   ---------->DOF2  ----------->GT1   ttgtgagatcaagaagaaaagaaaagatttatgtttttacaagttgtttacatttggtaataatgatgttcacaaagctggaaaataggctgtgaaaaag  8851100                                                                                               ------                                                                                              ------>NtERF2                                                                                           <---------ATERF1(1)                                                                                           <---------DEAR3(2)                                                                                          <---------DEAR3(1)                                                                                          --------->ETT(1)                                                                                        <-----------HVH21                                                                                       <------MYB46(1)                                                                                      --------->MYB111(1)                                                                                      <---------AtMYB61                                                        --------->LBD16               --------->MYB46(2)                                                       --------->LBD16                --------->MYB52(2)                                                   ------->TEIL                       --------->MYB59                                              <------MYB83                   <-----------GT1<------NtERF2 ----ZmHOX2a(2)                               <------MYB46(1)       ----------->RAV1(2)<------MYB83 ----->ARR11(3)                <----------DOF2<---------ANAC46  --------->ANAC58     <---------MYB55(1) ------ARR11(3)         <------------CBF     --------->MYB46(2) <---------ALFIN1    <---------MYB52(1) -->DOF2            --------->YAB1           --------->MYB111(2)--------->ANAC58   <-----------HVH21   atcaaacaaatgggcctgaaaatgagaattgggcttttggcctaagtttggtgaaccccgagagacacacatctgggtttaacgacgttaggtcggagcc  8851200                        ------>ZmHOX2a(1)                  --------->At4g35610                  --------->ZAT2                ------->PIF5                <-------PIF5                  <---------AtLEC2                   <----------DOF2          --------->DEAR3(1)                  <---------ANAC46                  <---------DAG2          <---------ALFIN1               <---------ANAC58                    <-----------GT1          --------->AtMYB61              <---------ANAC46                 <---------AHL20(2)         --------->MYB46(3)              <---------ANAC58                 --------------->AtSPL8 ------>CBF  <---------ALFIN1    <----------DOF2                         --------->AHL20(2)       ---   aatttgattccaccaccacgagcttcctaatctagctttaatggcgtttcatggaatcagagaagttgaaaactattttataccttttctacagcgagtc  8851300         --------->ATHB12        --------->ICU4        <---------ATHB12                                       <----------DOF2    <---------RAP2.6(3)                                      --------->ZAT2    --------->LBD16                  <---------YAB1          --------->At4g35610   --------->RAP2.3(2)             <---------ICU4            <---------At4g35610   --------->ANAC58                --------->YAB1      ---------->DOF2   --------->ANAC58           ------>NtERF2         --------->YAB1   --------->ANAC46  <---------ARR11(3)            <---------YAB1                                <---   --------->RAP2.6(2)<------ZmHOX2a(2)        <---------GLK1(2)<-------TEIL                     <--- ------->DOF2        --------->ARR11(3)     <---------------------WRI1                      <--------   aaaagccgcaatgaatggaagaagatcaatgcctccatcatcatacatggattatcacaaagcagcttcatggtcactaaaatggtggatttttgtgata  8851400       --------->CCA1(2)      --------->ARR11(3)      --------->ARR11(1)      <---------ARR11(3)                             --------->ARR11(3)      <---------ARR14(2)                         ------>ZmHOX2a(1) ------YAB1                     <-----------GT1--------->YAB1                <---------ANAC58       < ------TOE2(3)             <----------DOF2   <---------ARR14(2)              <---------ANAC58       - -YAB1--------->ARR14(2) ---------->ID1      --------->ARR14(2)         <---------YAB1          -----   agattgaagatatggattatgcaactcgtctttttaaccaagtatcgaatcctaatgtcttcttatacaattctataattcgtgcttatactcacaattc  8851500                                                                     <---------DAG2                                                                 --------->ZAT14                                                                 <-------TEIL                                                            <------ZmHOX2a(2)                                       <------ZmHOX2a(1)   <---------ARR14(2)                                 --------->At4g35610       --------->ARR14(2)                          --------->ANAC58    <----------DOF2    <---------ZAT14                          --------->ANAC46 --------->ARR11(3) <---------DEAR3(2)                          --------->ANAC58 <---------ARR11(3)------>ZmHOX2a(2)                 <-----                   <---------ARR14(2)  =============================HOX2a_HOX2a        --------->ARR11(3)                   --------->ARR14(2)  ============================HOX2a_HOX2a        <---------CCA1(2) ---------ZAT14    --------->GLK1(2)<-----------RAV1(2)----------------->AGL1       --------->AHL20(2) -------->ZAT14   <---------GLK1(2) <---------LBD16   -------->P <---------ZAT18<---------YAB1 <----- ---->ATHB12   --------->YAB1--------->MYB52(1)      <-----------GT1 <----------DOF2<---------AHL20(2)   attgtactgcgatgtgatcagaatctacaagcaactgctcaggaagagctttgagttaccagatcggttcactttcccgtttatgtttaaatcttgtgcg  8851600                                                                                                 ----         ----------->GT1          <-----------HVH21      <---------TOE1(2)                       <---      <------ZmHOX2a(2)      <-------TEIL                <---------TOE2(2)            --------->ATHB12 ----ANAC58           --------->ANAC58         --------->ARR14(2)     <---------YAB1 --------->ICU4 ----ANAC58           --------->ANAC58         <---------ARR14(2)     ----------->HVH21 <---------WOX13(1)   agtcttggatcatgttatttagggaagcaagttcatggtcatctctgcaaattcgggcctaggttccatgttgtgactgagaatgcattgattgatatgt  8851700  Previous    Next  AGI:  At2g20530.1    Description:  ATPHB6 (PROHIBITIN 6). similar to ATPHB1 (PROHIBITIN 1) [Arabidopsis thaliana] (TAIR:AT4G28510.1); similar to prohibitin 1-like protein [Brassica napus] (GB:AAK07610.1); contains InterPro domain Band 7 protein (InterPro:IPR001107); contains InterPro domain Prohibitin; (InterPro:IPR000163) Range:  from: 8849053    to: 8851081    Orientation: Forward Links:  TAIR  MIPS    AGI:  At2g20540.1    Description:  pentatricopeptide (PPR) repeat-containing protein. similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT5G56310.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44143.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44140.1); contains InterPro domain Pentatricopeptide repeat (InterPro:IPR002885) Range:  from: 8851241    to: 8852845    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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