Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                <---------YAB1                                                                         <---------AHL20(2)                                                                        <---------AHL20(2)                                                                     --------->AHL20(2)                                                                     <---------AHL20(2)                                                                 <---------ICU4                                --------->AHL20(2)              <---------YAB1--------->AHL20(2)           ------>ZmHOX2a(1)    --------->YAB1                 --------->ARR11(3)             -------          --------->TOE2(3)    <---------AHL20(2)              <---------ARR11(3)             <------       --------->ARR14(2)  --------->AHL20(2)             <---------AHL20(2)  <---------AHL20(2)       <---------ARR14(2)----------->GT1                  --------->AHL20(2) <---------AHL20(2)    -- -------DOF2           ---------->DOF2        ----------->GT1 --------->YAB1 --------->AHL20(2)<-----   ttttgtaagtatcctcattttttcagaaagtaaataatatcaaatgtattgagaaaacaataaatgatcatttttttattttaattagactcaaaattaa  8812100                                 -------->ATHB1                                 <---------ICU4                                                  <---                                 --------->YAB1                                          <---------AHL20(2)         --------->AHL20(2)     <---------YAB1                                          <---------AHL20(2)         <---------AHL20(2)     --------->ICU4                                          --------->AHL20(2)   ----------->GT1              <---------AHL20(2)                                      --------->AHL20(1) -->AHL20(2)                    --------->AHL20(2)                                      <---------AHL20(1) ---AHL20(2)              ----------->GT1       ----------->GT1  <---------ANAC58   <---------AHL20(2) ------->MYB52(1)  ------>MYB46(1) <---------YAB1--------->At5g28300           ----------->GT1   ---- ----AHL20(2)      ------>MYB83 --------->AHL20(1)               <---------ANAC58  --------->AHL20(2)   ataactggaaattaaaaaaccaaataaactgaaaattattatctaaaatacagtaactaaaaatttgtcttgtcgataagtcggataaaatttattcata  8812200                             <----------ID1                           --------->ZAT6                                                  <---------AHL20(2)                         --------->YAB1                                <---------YAB1      --------->ICU4                 --------->ANAC58                                   <---------AHL20(2)     --------->AHL20(2)                 --------->ANAC58                                   --------->AHL20(2)<----------ID1 <---------AHL20(2)    --------->AHL20(2)                          --------->YAB1  ---------->DOF2<-- --------->AHL20(2)   --------->YAB1                               --------->AHL20(2) ----------->GT1 ------AHL20(2)  --------->ANAC46             <---------ATHB12     <---------AHL20(1)----------->GT1- ----->AHL20(2)  ----------->GT1         --------->ANAC46          <---------AHL20(2)<---------TOE2(3)   taaatatttagtcatatacaagtaaaataatactacaaataatacacaatcagtcgatgttatatacaataaaattatagatttataaaggaaaaaatta  8812300                               <--------P                              <-------GAMYB                             <------MYB83                      XXXXXXXXXXXXXXXXXXXX>MIR841B*                  <---------YAB1          <-------              --------->bZIP60(1)       <---------YAB1               <---------AHL20(2)      --------       <---------CCA1(2)     <------MYB46(1)               <---------ANAC58                 --------- -------LBD16 <---------bZIP60(1)       <---------AHL20(2) <---------ANAC46                 --------- -------->LBD16   --------->WOX13(1)   --------->AHL20(2)  <---------ANAC58  <---------AHL20(2)   tccggcgatatatctgatgtcaatctctagtgggttagcatttttattgaaaaattgtattgcttagtttttttattgttatattgttagtgaattaaaa  8812400                                                                                                  <--                                                                                                 ----                                                                                                 ----                                                                                                -----                                                                                                -----                                                                                                <----                                                                                               <-----                                                                                               ------                                                                                               ------                                                                                              <------                                                                                              <------                                                                                              <------                                                                                              -------                                                                                              ------>NtERF2                                                                                    --------->AHL20(2)                                                                                    <---------AHL20(2)                                               <---------RVE1(1)          --------->AHL20(1) <-------                                              --------->ARR11(3)          <---------AHL20(1) <-------                                              <---------GLK1(2)           --------->ARR11(3) --------                                              <---------ARR11(3)        <---------ARR11(3)   --------   <----------DOF2                     <---------ARR11(3)               <---------AHL20(1)  <-------- --AHL20(2)                         <---------AHL20(2)                  --------->AHL20(1)  --------- ->AHL20(2)                         --------->AHL20(2)                  --------->ARR11(3)  --------- >YAB1                   <---------DAG2--------->ARR11(3)              --------->YAB1<---------AHL20(2) >AHL20(2)               <----------DOF2 --------->TOE2(3)        ----------------->AGL3   <XXXXXXXXX   tggtactttggtattttcatatatagactttttgaaaataaaatcttagattttttctaacaagagttaccaaaaatattttggaattaaatgagccggc  8812500 ----NtERF2 -->NtERF2 ------->RAV1(1) ---->DEAR3(1) ------>HVH21 -----ETT(2) -NtERF2 --->RAP2.3(1) --->ATERF1(1) ---ATERF1(1) ---DEAR4(2) ---RAP2.3(1)                                        <---------ZAT6 -->LBD16                                     <---------AHL20(2)           --------->TOE1(2) --DEAR3(1)                               <------ZmHOX2a(1)               <---------At4g35610 --ATERF1(2)                        --------->DAG2  <---------TOE1(3)     --------->At4g35610 ->DEAR3(1)                        ---------->DOF2  <---------TOE2(3)     --------->ZAT2 ->ATERF1(2)            ----------->GT1   ==============================HOX2a_HOX2a -LBD16          ----------->GT1  *TSS   ----------->GT1                  <---------ZAT2 >ATERF1(1)      <-------GAMYB  --------->YAB1--------->AHL20(2)      --------->YAB1 >DEAR3(2)      ----------->GT1<-------TEIL   --------->ICU4     <---------ATHB12             <------ XXXXXXXXXXXMIR779.1  <------------CBF  ----------->GT1          <------ZmHOX2a(2)        <---------At4g35610   gacatagaagaatagagagggttaaattgaaaattcataaagtaggaaaaaattagggttagactcgatcattcatagctgcgactattctctgctcttt  8812600                                                                                     ------>ZmHOX2a(2)                                                                                    <------ZmHOX2a(2)                                                                                    --------->GLK1(1)                                                                                    <---------GLK1(1)                                                                                   <-----------ARR10-                                                                                   <---------AGP1  --                                                              <------MYB83         --------->ARR11(3)                                                              <------MYB46(1)      <---------ARR14(2)                                                             <---------AtMYB61     --------->AGP1  <-                                                             <---------MYB46(3)    --------->ARR14(2)                                                           <---------ARR14(2)      <---------ARR11(3)                                                      --------->ALFIN1            <---------CCA1(2)--                          <---------DAG2         <---------ATHB12     --------->ANAC58            <-- ----DOF2                 <----------DOF2     --------->TOE1(2)       --------->ANAC58           <---   ctacattttctcattttctcttgggctacttttcgactactaacaaatccaacgatgaggggattggtgaacaagctcgtgtccagatctctctccatct  8812700                         ---------->ID1                      <-------TEIL                    <---------GLK1(2)                                                         <------                 --------->MYB46(3)                                                           =======                ------>MYB83                                                              <-------TEIL           <---------ARR14(2)                                                            --------->ARR14(1)           --------->ARR14(2)                          <<<<<<<<<TBF1                    --------->ARR14(2) -------->LBD16 ------>MYB46(1)                     <-------TEIL                        <---------GLK1(2) ------->HSFB2a(2) --------->ZAT2                  <---------ARR11(3)                   <---------ARR14(2) --------HSFB2a(2) --------->At4g35610             --------->ARR14(2)                   --------->ARR11(1) ------->LBD16 --------->MYB52(1)                  <---------ARR14(2)                 ----------->ARR10 -------LBD16  ----------->RAV1(1)                <---------GLK1(2)                <---------ANAC46 ------LBD16 --------->MYB46(3)                <-----------RAV1(2)            --------->MYB52(2)   ccgggaaatggcagaaccaacagcttcgtcgtctcaacatccacgagtatcaggttcttcttctcttcatttccatttgatagttgcctagattcgcttt  8812800                                     <---------MYB52(1)                                    <-------GAMYB                                   <---------MYB46(3)                      ------>ZmHOX2a(2)                     <------ZmHOX2a(2)                                 <--------P                    <---------ARR14(2)                                 <---------WOX13(1)  --------->TGA1a--------->SPL7    <-----------RAV1(1)               <---------MYB46(3)  ======================================bZIP_DOF                    <---------TOE2(3)         -------  --------->ANAC58  <---------ARR11(3)                        --------->ATHB12                <------ZmHOX2a(1)  --------->ANAC58  --------->ARR14(2)                      <---------WOX13(1)              <--------  ==========================================MYC_MYB       --------->ATHB12                  <-------- ----DOF2--------->ARR14(2)  <----------DOF2             <---------ATHB12      <---------GLK1(1) ===========bZIP_DOF--------->ARR11(3)               ------>ZmHOX2a(2)<-------GAMYB <---------LBD16--   tgtcaagtcagaattcgagtacgatctgtgtctttgtctgttgtttctgtgttgatccactgattgatttgtggttgatagaattctctgggtttaggat  8812900                                                 ----------->GT1                                                ----------->GT1                       <----------DOF2  ---------->DOF2                           --------->ATHB12                     --------->At4g35610 -->YAB1                            <---------At4g35610                          <---------At4g35610 -TOE2(3)            <---------YAB1 --------->At4g35610                 ---------->DOF2 -TOE1(3)    ----------->GT1        --------->ZAT2                     <---------RAP2.6(3) --------->GT1 <---------YAB1       <---------ZAT2                   ----------------->AGL1   aatgtaaagtttgtattgtgattctgatacaaccagggagctgaattgatggggaaatatggagttaatgtgccgaaaggagtagctgcttcttcgttgg  8813000  Previous    Next  AGI:  At2g20420.1    Description:  succinyl-CoA ligase (GDP-forming) beta-chain, mitochondrial, putative / succinyl-CoA synthetase, beta chain, putative / SCS-beta, putative. Identical to Succinyl-CoA ligase [GDP-forming] beta-chain, mitochondrial precursor [Arabidopsis Thaliana] (GB:O82662); similar to ACLA-1 (ATP-citrate lyase A-1) [Arabidopsis thaliana] (TAIR:AT1G10670.2); similar to ACLA-1 (ATP-citrate lyase A-1) [Arabidopsis thaliana] (TAIR:AT1G10670.1); similar to succinyl-CoA ligase beta subunit [Caragana jubata] (GB:ABQ10186.1); similar to succinyl CoA ligase beta subunit-like protein [Solanum tuberosum] (GB:ABC01911.1); similar to hypothetical protein [Vitis vinifera Range:  from: 8812534    to: 8815201    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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