Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                  --------->LBD16                                              <---------LBD16                                        <---------MYB52(1)                                    --------->ZAT2        <---------ANAC58            <---------ZAT2  <---------MYB46(3)        <---------ANAC58      <-----------HVH21<---------LBD16                   <-----------GT1 ------>DOF2        ---------->DOF2 <---------At4g35610                 <---------ZAT2 ------>ZmHOX2a(1) --->ANAC58       ---------->DOF2   --------->At4g35610                 <---------At4g35610 --->ANAC58     --------->AtMYB61 <-----------RAV1(2)                   --------->At4g35610--------->MYB46(3)   aaagacactgccttgcgaccaaaagagcccaatgtcccagctgttttgtccgggctgtttcaaaaacattcttcagctcattttcactcctaaacgacca  8804900                                                                                       ----------->GT1                                                                                    -------->P                                                                                    ------>MYB83                                                                                    ------>MYB46(1)                                                                                  --------->MYB46(3)                                                                         <------ZmHOX2a(2)                                             --------->ANAC58           <---------ARR11(3)          <---------ATHB12                   --------->ANAC58           --------->ARR11(3)     --------->TOE2(3)   ------->TEIL   --------->At4g35610    ----------->GT1 <-----------GT1   tatataacataaatcatccaaattttgaatctaatccatataagctcaagtcaataggtgtaaatgggtatatagatcatttcaccaactagaaaaacta  8805000                                                                                               ------                                                                                           <---------ARR14(2)                                         --------->LBD16                                   --------->ARR14(2)                                        <---------ANAC46                                   --------->GLK1(2)                                       <-------TEIL  --------->GLK1(1)          ------>ZmHOX2a(2)                                     <---------GLK1(2)                         <------ZmHOX2a(2)                                     <---------ARR14(2)                       --------->ARR11(3)                                     --------->ARR14(2)        <---------ARR14(2)      --------->YAB1                                    --------->At4g35610        --------->ARR14(2)     <---------ATHB12                                    <---------At4g35610     ------>ZmHOX2a(2) <---------ARR11(3)   ggtcgattttgaaatcgcgatagagatggaatgaattcagatgcgcgaagaagagaaatcgatcggattccaatttgtaagatcgcaaatcaaaatccga  8805100                                                                                       ------>ZmHOX2a(1)                                                                                       <----------DOF2                                                                                     ------>ZmHOX2a(2)                                                                                    <------ZmHOX2a(2)                                                                                   <---------ARR14(2)                                                                                   <---------ARR14(3)                   <---------ICU4                                                  --------->ARR14(2)              --------->WRKY18(1)                                                  --------->ARR14(3)             <-----------HVH21                                            <---------TOE1(3)             <--------ZAP1                                       <---------ANAC58  --------->ARR11(3)         <-----------GT1           ----------->GT1               <---------ANAC58  <---------ARR11(3) --->LBD16<---------At5g28300 ---------->DOF2              <---------YAB1 <---------TOE2(3)   aattggatttttcacggtcaagaattgcaaattcaagcagaaaaatcagagaagttgcatcatttttgggtaccttgaggttgaagatcctttgaagaac  8805200            --------->HSFB2a(2)            <---------HSFB2a(2)      --------->DEAR3(1)                                                          --------->ARR11(3)      ------->GAMYB                                                        <------MYB83     --------->DEAR3(2)                 <xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)<------MYB46(1)     --------->MYB46(3)               <-----------GT1                    --------->ALFIN1   <--------    ------->TEIL            <---------At4g35610                          <--------P ------>ZmHOX2a(2)  --------->ZAT14           --------->At4g35610                 --------->ZAT2    <---------ARR11(3)  --------->ZAT18           ----------->GT1                     <---------ZAT2  ----------->ARR10  <---------ZAT14         <-----------RAV1(2)                --------->LBD16   <---------KAN4(2)   *TSS   gaagtgaaccgcctcgcgaacatttttctcaggtgaattttgacccgactcgctgattcgacccgaagcagcgaggtaggggatgatctgtagggttctg  8805300                                   <----------DOF2                                <-----------GT1                            <---------YAB1                           <---------AHL20(1)                           <---------AHL20(2)                         <---------YAB1                      --------->AHL20(2)                                                            <                      <---------AHL20(2)                                                    ---------                   --------->ARR11(3)            <---------AHL20(2)             ----------->GT1  ----                   <---------ARR11(3)     <-------GAMYB       ---------->DOF2  <---------YAB1-------- -ARR14(2)       <---------TOE2(3) <---------DAG2--------->AHL20(2)   ------------>CBF      ---------   ggttttgcaacttcttatttagattttattatttttacttttttcgttgaaataaatatagattaaaagaaaaacaatagtatgtttaaaaaacccgaaa  8805400                         --------->ANAC55(2)                            <---------YAB1                         <---------ANAC58                             --------->YAB1                         <---------ANAC58                <---------YAB1--------->TOE2(3)                  --------->ICU4                         --------->AHL20(2)             <----------DOF2<-----------HVH21            <---------AHL20(2) -----------GT1  <---------TOE2(3)                      --------->AHL20(2)                     ------ -->GT1     --------->TOE1(3)               <---------AHL20(2)        <---------ICU4      --------->TOE1(3) ----->YAB1 --------->TOE2(3)      <-----------GT1      --------->AHL20(1)              ------->TEIL ->LBD16 <-----------GT1<---------TOE2(3)   --------->AHL20(2) <-----------GT1      --------------->AtSPL8 >ANAC46<-----------GT1<-----------GT1------->GAMYB     <---------AHL20(1) <---------YAB1 --------->TOE2(3)   aataacatttttaacctttaatgtttaacgtgtcatttaacagcattttaatcttcaatataattttactaaacattataaaacattttgtaccttaaaa  8805500                                                                                                   <-                                                                                                   --                                                                                               ------                                                                                               <-----                                                                                              -------                                                                                              <------                                                                                              <------                                                                                          <---------AHL20(2)                                                                              --------->AHL20(2)  ---                 ------>NtERF2                                        <---------YAB1<---------AHL20(2)               --------->DEAR3(2)                                    --------->AHL20(1)   --------->AHL20(2)              <---------At5g28300                                    <---------AHL20(1)   <---------YAB1              --------->SPL7     ----------->GT1                     <---------AHL20(2)  --------->AHL20(2)          --------------->AtSPL8<---------ANAC55(2)                 --------->YAB1 <---------AHL20(2)          <---------------AtSPL3<---------ANAC46                    --------->AHL20(2)   <---------AHL20(2)     --------------------->WRI1<---------LBD16                      <---------AHL20(2)  --------->YAB1     <---------ANAC58         --------->MYB52(1)                --------->AHL20(2) --------->AHL20(2)     <---------ANAC58    <---------AHL20(2)                    <---------AHL20(2) --------->YAB1  <-- --->ZAT6<---------ANAC46--------->AHL20(2)                 ----------->GT1   <---------AHL20(2)  <--   ctagttttcttgtttgtaccgccataaaaaaatgacggaaaataacatctactaacatgaaatagttaaattatatttgtttaattttaattttaattaa  8805600           <-----------GT1         <---------AHL20(2)                                                    <---------ANAC58 --------AHL20(2)                                                              <---------ANAC58 ------->AHL20(2)                                                              <---------LBD16 --->AHL20(2)                                            --------->YAB1      <-----------GT1 ----AHL20(2)                                      --------->ZAT6        <---------AHL20(2) -->AHL20(2)                                    <---------AHL20(2)       --------->AHL20(2) ---AHL20(2)                                    --------->AHL20(2) ----------->RAV1(1) ---AHL20(1)<<<<<<<<<GATA-1                     <---------ICU4   <---------ZAT18                    - ------>AHL20(2)                            ------>ZmHOX2a(1)    <---------ZAT14                 <--- -------AHL20(2)                     <---------CCA1(2)  <---------YAB1  --------->AHL20(2)       ---- -------AHL20(1)             <------ZmHOX2a(1) --------->AHL20(2)--------->ZAT14            ---------   tttaatttcaatttatctatttaagagattaggaatgccatctctcctaattaatactatgatacagagcaccatttattttcgggctaatcttaggtga  8805700                                                                         --------->ARR14(2)                                                                         <---------ARR14(2)                                                                         --------->GLK1(2)     --------->AHL20(1)                                                 --------->GLK1(1)     <---------AHL20(2)                                                 <---------GLK1(1)     <---------AHL20(1)                <---------AHL20(2)            --------->LBD16     --------->AHL20(2)                --------->AHL20(2)           --------->ANAC46    --------->AHL20(2)         <-----------GT1                      <---------ANAC55(2) ------>TEIL               <---------YAB1                           --------->ANAC55(2) ------YAB1                --------->ICU4       <----------DOF2    <---------LBD16          <-------- ----->ICU4     --------->AHL20(2)   <----------DOF2            <----------DOF2            <---------ZAT6 >ANAC55(2)   --------->ICU4<---------ICU4     <---------ICU4<-----------GT1         <---------YAB1 -   tgaatattaaattgccatttttatatgtgattatgacctctttaattcatcttttctgatgtttttctttacggaaatctgtcattttttatagtgtcac  8805800  Previous    Next  AGI:  At2g20390.1    Description:  similar to unknown [Populus trichocarpa] (GB:ABK95484.1) Range:  from: 8803364    to: 8805299    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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