Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                           --------->PCF2                                                         --------->PCF5                                                         --------->TCP16(1)                                                        <---------TCP16(2)                                                       <---------MYB46(3)                                                       --------->ABI4(2)                                                      --------->ALFIN1                                                      <---------AtMYB61                                                     <------NtERF2                                                     <-------GAMYB                                                    <---------MYB46(3)                                                   <---------ANAC58                                                   <---------ANAC46                                                   <---------ANAC58                                                   <---------DEAR3(1)                                                   <---------RAP2.6(2)                                                   <---------DEAR4(1)                                                   <---------DREB2C(2)                                                  --------->ATERF1(1)                                                  <---------ABI4(1)                                                 ------>NtERF2                                                <---------DEAR3(1)                                                --------->ALFIN1                                                <---------AtMYB61                    --------->ATHB12            ----------->HVH21                    --------->YAB1             <---------ABI4(1)                    <---------ICU4             --------->ATERF1(1)                    -------->ATHB1             <------NtERF2              --------->YAB1                  <---------MYB46(3)           <---------ICU4      --------->HSFB2a(2)<------NtERF2      <---------ALFIN1<---------YAB1          <---------ORA47(2)                                <----     --------->ANAC46--------->TOE2(3)        <---------DEAR4(2)                                <---- -------->ARR14(2)  <--------HAHB4            <---------ATERF1(1)                          ------>ZmHOX2a(1) ---------ARR14(2) --------->ICU4            <---------DEAR3(1)--------->YAB1        ------>ZmHOX2a(1) --------CCA1(2)  --------->GLK1(2)     <---------MYB52(1)     <---------ICU4     ------>ZmHOX2a(1) ----->YAB1--------->YAB1<---------TOE2(3)   <---------DREB2C(2)                 <---------ALFIN1 --ZmHOX2a(2)--------->At4g35610--------->LBD16<-------GAMYB  <---------ATHB12 ------>ZmHOX2a(1)<----   catatccccctcatcatcagaatcattaatgttcccgagtcccttaggcggtggcggtggtcccatcataacttcttcatcctcctcctcttcctcttgc  8782300                          --------->ARR14(2)                          <---------TCP20                          --------->PCF5                          <---------ARR14(2)                          --------->PCF2                         --------->ATERF1(1)                        ----------->HVH21                       <---------ANAC46                       <---------ANAC58                       <---------ANAC58                      <------NtERF2                      --------->ATERF1(1)                     ------>NtERF2                     <---------MYB46(3)                    --------->ALFIN1                    <---------AtMYB61                   <-------GAMYB                   --------->ATERF1(1)                   <---------ABI4(1)                   <------NtERF2                  <---------ATERF1(1)                  <---------MYB46(3)                  <---------RAP2.3(1)                 <---------ANAC46                 <---------DEAR3(1)                 <---------ANAC58                 <---------DEAR4(1)                 <---------DREB2C(2)                 <---------RAP2.6(2)                 <---------ANAC58                     <---------TOE2(3)                --------->ATERF1(1)                <---------MYB52(1)                <------NtERF2                    <----------DOF2                <---------ABI4(1)                <---------MYB46(3)           <---------DREB2C(2)                 --------->ZAT2           <---------DEAR3(1)                  <---------ZAT2         --------->MYB52(1)                    <---------At4g35610        ----------->HVH21<---------TCP16(2)    --------->At4g35610        ----------->TGA1<---------SPL7        <---------ARR14(2)      --------->At4g35610------>NtERF2        --------->ARR14(2)      <---------At4g35610<------NtERF2      --------->LBD16         --------->SPL7  <---------MYB52(1)<---------DEAR3(1)    <---------LBD16     <---------ARR14(2)       <-----------RAV1(2) -----ANAC58   ------>NtERF2          <-----------HVH21<---------ZAT6                ------>NtERF2 -----ANAC58  <---------DEAR3(1)     --------->REM1(1)<---------TOE1(3)     --------->ZAT6      <---- -----ANAC46  --------->ALFIN1       --------->bZIP60(2)    <---------YAB1  <---------ALFIN1    -----   gtccgtttagatgacggtggcggtggcggacccattgctacatcaccggagctgttagggttacgattcggaccgcgaacacttcggagccaggtttgag  8782400                                                                            <-------GAMYB                                                                           <---------MYB46(3)                                                                          <------NtERF2                                                                        --------->DEAR3(1)                                                                      <---------ATERF1(1)                                                                      --------->LBD16         ------>NtERF2                                                                      ------>NtERF2           <------NtERF2                                                                    <---------LBD16          <-------                                                                 --------->HSFC1(2)         <--------                                                                 <---------HSFB2a(1)        <--------                  --------->GLK1(2)                              --------->HSFB2a(1)       --------->ABI4(2)                  <---------ARR14(2)                             <---------HSFC1(2)        <---------ABI4(1)                  --------->ARR14(2)                         --------->ANAC46       --------->REM1(1)             <---------ANAC46                                --------->ANAC58  <---------MYB46(3) <--           --------->CCA1(2)                                 --------->ANAC58<---------MYB52(1)<-----       --------->CCA1(2)                               --------->ARR14(2)<-----------HVH21 --------->SPL7  <------ZmHOX2a(1)                                   <---------GLK1(1) <---------DEAR3(1)--------->ALFIN1 -----At4g35610  <---------GLK1(1)                    --------->GLK1(1) <---------ANAC46<---------DEAR3(2) ---->At4g35610  --------->GLK1(1)  <-----------RAV1(2)<---------ARR14(2)------>NtERF2 <---------DEAR3(1)   atgaggaagatagagacgggaatccagatttatcggaatcaggtttcttcgtggtgatatccgacgaaactccggcgtcgttggctacatcggtgcggcg  8782500                                                 ------>MYB46(1)                                                 ------>MYB83                                                 --------->MYB52(1)                                 --------->TOE1(3)                                 --------->TOE2(2)                     ----------->HVH21          <---------SPL7         <---------AtLEC2 <------NtERF2        <---------MYB46(2)      --------->At5g28300 --------->RAP2.3(1)  <---------MYB59     <---------ANAC46--------->WRKY12          --------->MYB46(3)   <---------At4g35610   ------>NtERF2        --------->HSFB2a(2)  <---------ANAC46 <---------At4g35610     <---------SPL7----------->GT1 --RAP2.3(1)       --------->At4g35610    <---------ANAC58 -DEAR3(1)         <-------GAMYB --------->TOE1(2)--------->SPL7               ------>MYB83------>ZmHOX2a(1) -RAP2.6(2)      <-----------RAV1(2)      <---------ANAC58 <------ZmHOX2a(1)   ------>MYB46(1)     <- -------ZAT2  <---------ANAC58  <---------HSFB2a(1)--------->ANAC58        --------->ARR11(3)     <-- ----ANAC46   <---------ANAC58  --------->HSFB2a(1)--------->ANAC58        <---------ARR11(3)     <--   agttgcgctgtgaatggcttcagttgacgccgaaaccttcgatgtcttaccgaacgaaacaggaaaatgagctcgtagaccttccaattcgtcctccatt  8782600                                                              <---------RAP2.6(3)                                                             --------->DEAR3(1)                                                             --------->ATERF1(2)                                                             <---------ATERF1(2)                                                             --------->RRTF1(2)                                                             --------->RAP2.3(3)                                                             --------->DREB2C(2)                                                             --------->RAP2.3(2)                                                             --------->RAP2.6(2)                                                             --------->ANAC46                                                             --------->RRTF1(3)                                                            --------->ERF1                     *TSS                                                       --------->bZIP60(1)                   <------NtERF2                                                       <---------bZIP60(2)                  ------>NtERF2                                                       <---------bZIP60(1)                  ---------                                                    ----------->HVH21                      ----------                                                    --------->WRKY38(1)                    <---------ETT(2)                                                    --------->WRKY12                       --------->DEAR3(1)                                                   <-----------HVH21                     --------->LBD16                                                   <---------MYB52(1)                    --------->ANAC46                                                  --------->At4g35610                   <---------ATERF1(2)                                                  <---------At4g35610                  --------->DEAR3(2)                                                  --------->LBD16                      <---------LBD16                                                 <---------MYB46(3)    --------->KAN4(2)--------->ATERF1(2)                                                --------->SPL7------>NtERF2           <---------At5g28300                                              <-----------HVH21   --------->AtLEC2    --------->MYB52(1)                                              <---------SPL7--------->RAP2.3(1)    <-------GAMYB                               --------->CCA1(2)<---------LBD16<------NtERF2       <-----------HVH21 ---------DOF2        --------->ATHB12     <-----------GT1 <---------ATERF1(1)   <---------ANAC46   < -------ANAC58       <---------YAB1   --------->AHL20(2)  <---------DEAR3(1)  <---------MYB52(1)    < -------ANAC58  <---------GLK1(2)     <---------AHL20(2)  --------->ANAC46   <-------GAMYB--------->RAP2.3(1)   gctttctcttccttctcagaattttgatttgggatacaaattatataacgtccggtgacctcgccgccatgaaaattcccgttgctgttaccggcgacaa  8782700          <---------MYB52(1)         <-------GAMYB         --------->At5g28300       <---------ANAC46       <---------RAP2.6(2)       <---------DEAR3(1)                                                                     <------  <-----------RAV1(1)            <------------CBF                                             ------- -->RAV1(1)             --------->ANAC46                       --------->TOE2(3)              ------- ->HVH21<---------MYB46(3)    --------->YAB1                ------->GAMYB               <---------HSFB2a(2) ---------GLK1(2)    --------->ANAC46                    --------->MYB52(1)        <<<<<<<<<TBF1 ------------CBF<-------TEIL------------>CBF     ---------->DOF2         ---------->DOF2--------->HSFB2a(2)   aagattgtggcggttaagtccataagacacaacaatattgggcctaaacatataagccctaactgccttagtaaataaagttttcttcttctaaaaccta  8782800                                           <---------ANAC58            ------>MYB83   <---------AHL20(2)---------->DOF2       <---------ANAC58          --------->TOE2(2)  --------->AHL20(2)---------->DOF2        <---------ANAC46          --------->TOE1(2)             <- ---MYB59           --------->MYB52(1) <---------MYB52(1)    <---------AHL20(2)   <---------AHL20(2) -->TOE1(3)    ----------->RAV1(1)     <----------DOF2 <-----------GT1 ------>MYB46(1)           ---- -->TOE2(3)   --------->REM1(1)    ---------->ID1   <---------YAB1<-----------GT1 --------->AHL20(2)   aattttaaattgggcttcaacataaaggcccatttatgtccctttgcttgagttatttttcatttttttcacctacgagagtatttatttcggtgcaaat  8782900                                                             <-----------HVH21                                                            ------->GAMYB                                                          --------->At4g35610                                                          <---------At4g35610                                                <---------ARR14(2)                                                --------->ARR14(2)                                                --------->ARR11(3)           ----------->GT1         --------->ICU4   <---------ZAT6  ---------->DOF2        <---------LBD16            <---------YAB1<-----------GT1    --------->MYB52(1) --------YAB1             ---------->DOF2     <---------KAN4(2)   <---------MYB52(2)                < ------->GT1          <----------ID1          ---------->TaMYB80 --------->At4g35610     <-----------GT1   tgtgatttctctcgggtgaaataagagacaaagtgtcatgattttgagaatatactgttcaactgtcaactaaagggaatgctaacattttatacagttc  8783000                                                       --------->LBD16                                                       ------>NtERF2                                                       <------NtERF2                                                      --------->DEAR3(1)                                                     --------->ATERF1(1)                                                     <---------LBD16                                                     <------NtERF2                      <---------TOE1(2)                                                    ------>NtERF2                  <-----------HVH21                                                    <---------ATERF1(1)     --------->TOE2(3)                                                    <---------RAP2.3(1)   --------->ARR14(2)                                                   --------->DEAR3(1)     <-----------ARR10                                                   <---------DEAR3(1)     <---------ARR14(2)                                                  <------NtERF2           <---------ARR11(3)        --------->MYB52(1)                        --------->ATERF1(1)     --------->GLK1(2)      <---------MYB52(2)                         <---------ATERF1(1)      --------->ARR11(3)    --------------->AGL15 <---------YAB1         <-----------HVH21       <---------CCA1(2)      ----- ----------DOF2    <---------ANAC46        <----------DOF2           --------->AtLEC2   <---------TOE2(2)   gactttcaactaaggggaatgctgtgttatatttatagcgatacactttgtcgtcgccgcgagatgtcgaaatgcaaatcttaagggtcataggtttata  8783100                    <---------ZAT6     <---------CCA1(1)     <---------RVE1(1)    <---------ARR11(3)                                                        --------->YAB1    --------->ARR11(3)                                                     --------->YAB1 ----->DOF2   <---------ZAT6                 <------ZmHOX2a(2)            --------->AHL20(2)   aagacagatatttgcagagttagtgtgagtggtatgtgtttggaccgatctaattttgtccctcgcacataaaacaataaatataacaaatagctggtcg  8783200  Previous    Next  AGI:  At2g20330.1    Description:  transducin family protein / WD-40 repeat family protein. similar to transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT2G43770.1); similar to hypothetical protein OsI_032787 [Oryza sativa (indica cultivar-group)] (GB:EAY78828.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40542.1); similar to hypothetical protein OsJ_030560 [Oryza sativa (japonica cultivar-group)] (GB:EAZ16351.1); contains InterPro domain WD40 repeat-like (InterPro:IPR011046); contains InterPro domain WD40/YVTN repeat-like (InterPro:IPR015943); contains InterPro domain WD40 repeat (InterPro:IPR001680) Range:  from: 8779768    to: 8782695    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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