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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
---------->
DOF2
--------->
AtMYB61
----------->
RAV1(1)
--------->
MYB46(3)
-----
ARR14(2)
<-----------
GT1
---->
ARR14(2)
--------->
AHL20(2)
-------
ARR10
--------->
YAB1
<
-----
ARR11(3)
<---------
ICU4
===============================
HOX2a_HOX2a
<-----
---->
GLK1(2)
--------->
YAB1
<------
ZmHOX2a(2)
--------->
DAG2
---->
ARR11(3)
--------->
MYB46(3)
<---------
YAB1
<---------
ARR11(3)
---------->
DOF2
----
CCA1(2)
<----------
ID1
---------->
DOF2
--------->
ARR11(3)
------>
ZmHOX2a(1)
------
t
cttcaccaccaaaaagaacaaacccagtaaaagtatcaatattgacaaactagatcataaattaacaaaacccattcctctaattgaaccaaaaagtat
8746400
---
------>
MYB46(1)
<---------
HSFB2a(2)
------>
MYB83
<-----------
RAV1(2)
--------->
TOE1(2)
--------->
HSFB2a(2)
--------->
TOE2(2)
<------
ZmHOX2a(2)
--------->
DEAR3(2)
------>
ZmHOX2a(1)
----
------->
TEIL
------->
GAMYB
--------->
ARR14(2)
---------
ZAT18
------->
GAMYB
------>
NtERF2
--------->
ZAT6
<---------
ARR14(2)
----
ZAT14
<-----------
RAV1(2)
--------->
MYB46(3)
<-----------
GT1
<---------------------
WRI1
--->
ZAT14
----------->
RAV1(1)
--------->
MYB52(1)
----------->
RAV1(1)
==================
HOX2a_HOX2a
agtgaacctac
gagcaccaggttttggagtaaacaacgacagggttctctgccacagtcgttttaacagtctcctccaatgtcgatccagacgaagacga
8746500
--------->
GLK1(2)
--------->
bZIP60(2)
----------->
HVH21
--------->
ANAC58
==========================
MYC_MYB
--------->
ANAC58
<----------
DOF2
--------->
ANAC46
<------
NtERF2
--------->
O2
<---------
DEAR3(1)
--------->
TGA1a
--------->
RAP2.6(3)
====================================
bZIP_DOF
<------
NtERF2
<-----------
HVH21
<---------
RAP2.6(2)
==============================
RAV
<---------
MYB46(3)
<-----------
RAV1(1)
----------->
GT1
<---------
AtMYB61
--------->
ARR14(2)
---------->
DOF2
--------->
MYB52(1)
------>
NtERF2
------->
GAMYB
------>
ZmHOX2a(1)
--------->
MYB52(1)
--------->
ALFIN1
<---------
ARR14(2)
<---------
LBD16
------>
YAB1
--------->
TOE2(3)
------->
GAMYB
<---------
O2
<---------
MYB52(1)
----------->
RAV1(2)
----->
ICU4
--------->
TOE1(3)
=======================
MYC_MYB
<------------
AtMYB77
----------->
HVH21
tgatgaagacatagccttaacagaagaacaacggagtggtggccacgacgcgattccgataactgtcggctttagacatctcctgaaaggtaacatgccc
8746600
<---------
At4g35610
<---------
RAP2.3(1)
<---------
ANAC58
<---------
ANAC46
--------->
At4g35610
<-----------
GT1
<---------
ANAC58
<---------
At4g35610
<---------
ARR14(2)
<---------
RAP2.6(2)
--------->
LBD16
--------->
ARR14(2)
<-----------
HVH21
<---------
LBD16
--------->
ARR14(2)
<---------
ANAC58
--------->
bZIP60(2)
<-----------
RAV1(1)
<---------
YAB1
<---------
ANAC58
<-------
TEIL
<---------
HSFB2a(2)
--------->
GLK1(2)
---------->
DOF2
--------------------->
WRI1
--------->
HSFB2a(2)
aagtttctgattccgcttaacatggagaaagagattgctggatttgaatttaacgacgtccatgtcatgttcgcgaggtttactgttgcggctaccat
gg
8746700
<---------
<----------
DOF2
<----------
DOF2
*
TSS
<-----------
TBP
--------------->
AtSPL8
<----------
DOF2
--------------------->
WRI1
---------->
ID1
<---------
ANAC58
<-----------
GT1
<---------
RVE1(1)
--------->
ANAC58
<---------
AHL20(2)
--------->
ARR14(2)
------
--------->
ANAC58
<---------
YAB1
<---------
AHL20(2)
<---------
MYB52(1)
<-----
<<<<<<<<<
TBF1
<---------
ANAC58
--------->
AHL20(2)
<---------
ARR14(2)
--------
cgatttcttcttccgacgaaattggatgcttttcttatttttgccctcagattaattt
acctctttttatatcgccgatattttttgttctttatttata
8746800
<----------
DOF2
<---------
YAB1
------------>
CBF
--------->
ICU4
--
TBP
--------->
AHL20(2)
<------------
CBF
----->
TBP
--------->
YAB1
<---------
AHL20(2)
<----
----
YAB1
<-------
TEIL
--------->
AHL20(2)
<-----
->
YAB1
--------->
AHL20(2)
--------->
ATHB12
<-----------
GT1
<---------
AHL20(2)
<-----------
GT1
aatatcaataaaacaactaaatattcataagaattgattaaaattctttgtttttaatacatttctgtagtttttattttctctagtaagtttacgacct
8746900
<---------
AHL20(2)
--------->
AHL20(2)
--------->
YAB1
<---------
YAB1
<---------
WOX13(1)
--------->
YAB1
-------->
HAHB4
--------->
ANAC46
---------->
DOF2
---------->
DOF2
<----------
DOF2
<-----------
GT1
<-----------
GT1
<---------
YAB1
<---------
ARR11(3)
------
DOF2
--------->
ICU4
---------->
DOF2
--------->
ICU4
--------->
ARR11(3)
------>
NtERF2
----
----
DAG2
<---------
ICU4
----------->
RAV1(1)
--------->
ATHB12
<---------
ARR11(3)
-----
tttatttacacatcatgataaaattaacaacaacaaagaaagatgaaaatgattggacaaaaaagatactactagttctttgatgaggcca
tttaagact
8747000
--------->
ANAC46
<---------
ZAT14
--------->
ZAT18
<-------
TEIL
--------->
ANAC58
--------->
ZAT14
------->
MYC2
--------->
ANAC46
<---------
ZAT18
<-------
MYC3
--------->
ICU4
<---------------
AtSPL8
--------->
MYB52(1)
--------->
ANAC58
--------------->
AtSPL8
<---------
--------->
At5g28300
------->
GAMYB
---------->
DOF2
------->
MYC4
----->
At5g28300
<---------
ALFIN1
<---------
ATHB12
<-------
MYC2
-
------>
GT1
<---------
ATHB51
<XXXXXXXXXXXXXXXXXXXX
MIR860
------->
MYC3
--
gtaaaacagtaacagaaattattcaacaccccaaaatggggtttgtgtctgcaaaatccaatctattgaaagtacacaaaaacaaaacatgtgctttctc
8747100
------->
TEIL
--------->
ARR14(2)
<---------
ANAC58
<---------
ARR14(2)
<---------
ANAC58
<---------
ALFIN1
--------->
GLK1(2)
<---------
ANAC58
<---------
ALFIN1
--------->
ANAC58
--------->
ZAT2
-
DOF2
------>
ZmHOX2a(1)
--------->
ANAC58
--------->
ANAC58
----->
ZmHOX2a(1)
--------->
ANAC46
--------->
ANAC58
------->
ANAC46
<-----------
GT1
<---------
MYB52(1)
------>
ZmHOX2a(2)
<---------
ANAC58
tcctccacctcttcctcttagaccatttttcatt
tcaagatgacccttcgtcgtttggctcacgaatctggatcgatgttttcgacaagcttgcttccaa
8747200
<---------
ICU4
<---------
YAB1
--------->
YAB1
<---------
ICU4
<---------
YAB1
--------->
YAB1
<---------
ICU4
<---------
YAB1
<
XXXXXXXXXXXXXXXXXXXX>
MIR414
<---------
WOX13(1)
<
<---------
ZAT2
<---------
ICU4
<<<<<<<<<
TBF1
<
--------->
At4g35610
--------->
YAB1
<<<<<<<<<
TBF1
--------->
ZAT6
<---------
At4g35610
<---------
YAB1
<---------
At4g35610
<----------
DOF2
--------->
At4g35610
--------->
ZAT2
--------->
ICU4
<-----------
TGA1
--------->
ATHB12
<---------
At4g35610
ttcatccagctcatccatgtctaggtcatcatcatcatcatcgtcatcttcttcttcttcattgacttctttcgaactctgttcagcatcaccactactc
8747300
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AGI:
At2g20270.1
Description:
glutaredoxin family protein. Identical to Monothiol glutaredoxin-S12, chloroplast precursor (GRXS12) [Arabidopsis Thaliana] (GB:Q8LBS4;GB:Q9SK75); similar to glutaredoxin family protein [Arabidopsis thaliana] (TAIR:AT4G28730.1); similar to unknown [Populus trichocarpa] (GB:ABK93540.1); contains InterPro domain Thioredoxin-like fold (InterPro:IPR012336); contains InterPro domain Glutaredoxin, eukaryotic and viruses; (InterPro:IPR011899); contains InterPro domain Glutaredoxin; (InterPro:IPR002109); contains InterPro domain Glutaredoxin subgroup (InterPro:IPR014025)
Range:
from: 8744786
to: 8746758
Orientation: Reverse
Links:
TAIR
MIPS
AGI:
At2g20280.1
Description:
zinc finger (CCCH-type) family protein. similar to putative uncharacterized hypothalamus protein HT010 [Oryza sativa (japonica cultivar-group)] (GB:BAD73384.1); similar to Os01g0834700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044722.1); contains InterPro domain Zinc finger, CCCH-type; (InterPro:IPR000571)
Range:
from: 8746992
to: 8749430
Orientation: Reverse
Links:
TAIR
MIPS
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when using AthaMap.
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