Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                               --------                                                                                             --------                   ------>MYB46(1)--------->At4g35610                                      --------->At4g35610                   ------>MYB83  ------->GAMYB                                          --------->At4g35610                   --------->ANAC46                                                     <---------At4g35610      <---------ANAC58        ----------->RAV1(1)                                      ----------->RAV1(1)      <---------ANAC46    <---------ETT(2)                                           <---------ZAT2<-      <---------ANAC58 --------->At4g35610                                           <---------At4g35610   <--------P      --------->ANAC58                       ------->TEIL               --------->At4g35610 ------>HVH21      --------->ANAC58   <------ZmHOX2a(1)<---------ATHB12          <------ZmHOX2a(1) --   aacaggttgcttactatcaccaagccgctcgacaacagcaggaacaagagcattcaaatgaagcttcaaatgctcaccagcgaggacagcagcagaagca  8725700                                                                                 --------->LBD16                                                                               <---------LBD16                                                                        <-----------TGA1                                                                        <-----------HVH21                                                                       <---------ANAC58                                                                       <---------bZIP60(1)                                                                       --------->bZIP60(2)                                                                       --------->bZIP60(1)                                                                       --------->ANAC58                                                                       --------->O2                                                                       <---------TGA2(1)                                                <------ZmHOX2a(2)      --------->ANAC58                                                --------->CCA1(2)      <---------ANAC58                                               --------->AGP1          <---------O2                                               --------->ARR14(2)      --------->TGA1a                                               --------->ARR11(3)      --------->TGA2(1)                                               <---------ARR11(3)      <---------TGA1a                                               <---------ARR14(2)      <---------bZIP60(2)                                              --------->GLK1(1)        <---------ANAC55(2)                                            <------ZmHOX2a(1)          --------->ANAC55(2)                                       ================HOX2a_HOX2a    ----------->STF1              -                                       ------>ZmHOX2a(1)              <-----------STF1              < ->ANAC58                             --------->TOE2(3)             ----------->HVH21               - ->ANAC58                             --------->TOE1(3)             ----------->TGA1                - --------ARR11(3)                   <---------YAB1                --------->ANAC55(2)               < ------->ARR11(3)              <-----------GT1<---------GLK1(1)   <---------ANAC55(2)<------ZmHOX2a(1)   agagcttgaagagcaccttgagagactctaaaattactatccttaaggagatccaaacaagaatcaacaagtgacgtcacttccgcaggactcaaactct  8725800          --------->HSFC1(1)          <---------HSFB2a(2)          <---------HSFC1(1)          --------->HSFB2a(2)     <---------HSFB2a(1)     --------->HSFB2a(1)     --------->HSFC1(2)            --------->At4g35610     <---------HSFC1(2)            --------->ZAT2 -------->HSFC1(1)                 <---------At4g35610 ---------HSFC1(1)                ------->GAMYB  <----------DOF2   --------->ANAC46 -------->HSFB2a(2)              --------->MYB46(3)   <---------CCA1(2)      ---------->DOF2        < ----->ZmHOX2a(1)       ------>NtERF2          <----------DOF2     --------->ANAC58         <-------- ---------HSFB2a(2) <---------REM1(1)--------->RAP2.6(2)           --------->ANAC58   ------>ZmHOX2a(1)   tcctagaagcttcgagaagttgatgcagcctttcaacagcagccatgcgctcttttgtatccttggctctcgccatttctaaagcttcctccattttttt  8725900                   <---------HSFB2a(1)             --------->At4g35610                   <---------HSFC1(2)              <---------At4g35610            --------->MYB52(1)                   ------>ZmHOX2a(2)           ----------->HVH21                    --------->CCA1(2)           --------->At1g77200                  <------ZmHOX2a(2)           --------->DEAR3(1)                  <---------ARR14(2)           --------->DREB2C(2)                 --------->AGP1           --------->MYB46(3)                  --------->ARR11(3)           ------->GAMYB                  <-----------HVH21          --------->MYB46(3)              <---------MYB52(1)         --------->MYB52(1)           ==================HOX2a_HOX2a                             <----        --------->AtMYB61   =================HOX2a_HOX2a                                        -----       <---------MYB55(2)  <------ZmHOX2a(2)   <---------AGP1                                  ------       --------->MYB46(3)  ==================HOX2a_HOX2a                                    ---------     ------>MYB83  --------->HSFC1(2)<---------ALFIN1   --------->GLK1(1)                   ---------     --------->ANAC46     <---------ARR14(2)   --------->ARR14(2)                           ---------     ------>MYB46(1)      --------->ARR14(2)   <---------ARR11(3)                         --------->ANAC58   <---------MYB59 --------->HSFB2a(1)=================HOX2a_HOX2a                        --------->ANAC46   <---------MYB46(2)--------->GLK1(2)------>ZmHOX2a(1) <---------GLK1(1)                 --------->ANAC58 -----------GT1<---------SPL7----------->HVH21<---------CCA1(2)               ---------->DOF2  ------ -AHL20(2)--------->DEAR3(2)------>ZmHOX2a(2)----------->ARR10    --------->YAB1        --------->ANAC46   ttttaccaaaccaccgacggacgattccgatctgacgctcctccgttcagatctgctgaaatctctaatcagaggtattggaaagaaaacacacaccaaa  8726000                  --------->ARR14(2) -----ARR14(2)    <---------ARR14(2) ---->ARR14(2)    <---------GLK1(2)                                              <---------ANAC46 >MYB46(1)     <---------ANAC46                                                <---------ANAC46 >ANAC46     --------->MYB52(1)                                         <---------ANAC46 >ANAC58    ----------->HVH21                                         <---------ZAT14 >ANAC58    <---------ATHB12            --------->GLK1(2)             <-------GAMYB                 - >MYB83<------ZmHOX2a(2)               <---------GLK1(2)             --------->ALFIN1              *TSS   ttcgaatcgatccaatgacggattcgatgaacagtgagcgagaatcgtagagagagagagagagagagagtgtgttgtgttctgtgtgtaaatgtgttta  8726100                                         <---------------AtSPL8                                  --------->AHL20(2)                                  <---------AHL20(2)                              <---------ANAC58                              <---------ANAC46                   --------->DAG2                              <---------ANAC58                 ---------->DOF2       --------->DAG2         ----------->GT1            <-----------------------TaNAC69(2)      ---------->DOF2      --------->ALFIN1             ---------->DOF2                  --------->ZAT14 ---------->GT1           <---------HSFC1(2)       ---------->DOF2                       <---------ZAT14   gagagagaaaaagggatttgaggggagaagtgtcgtttaatttttagtactaagaaagaaaagagtaaaggcgagagactagtagagagactaaactcat  8726200                                <------NtERF2                               <---------ATERF1(1)                              <---------DEAR3(1)                             <---------ANAC58                             <---------ANAC58                           <---------MYB46(3)                           <------MYB83                           --------->MYB55(2)                           <------MYB46(1)                        <-------GAMYB                       <---------MYB46(3)   <---------ANAC58                      --------->ALFIN1      <---------ANAC58                     ------->MYC2    <----------DOF2                     <-------MYC2<---------ANAC58                    <---------At5g28300      <------                     <-------MYC3<---------ANAC58                   <-----------GT1      <---------YAB1                     ------->MYC3<---------ANAC46                <---------ICU4        --------->YAB1        --------->CCA1(2)<--------P<------NtERF2           --------->TOE2(3)     --------->ZAT6   tttgaagaagataaacgagagcatgtggttggctggcgtctttggtacttgcccttgtttttcttaatatttactgtttcataccactattatgttatgg  8726300                      <---------GLK1(2)                      <---------ARR14(2)                      --------->ARR14(2)                 <---------ARR14(2)                 --------->ARR14(2)               <---------ATERF1(1)                ----------->GT1               <---------DEAR3(2)                <------MYB83               <---------MYB46(3)                <------MYB46(1)              <---------DEAR3(1)              <-------GAMYB            --------->MYB52(1)                <---------MYB52(1)           --------->DEAR3(1)       <<<<<<<<<<MYB80           --------->ANAC46        ----------->GT1<------MYB83          --------->DEAR3(2)       <---------MYB46(3)                 ----------->GT1          --------->MYB46(3)       <------MYB83<--------P            --------->DAG2          <------------AtMYB77     <------MYB46(1)<------MYB46(1)   ---------->DOF2         <---------At5g28300      <---------AtMYB61      <-----------GT1        --------->MYB52(1)       <--------P<---------LBD16     --------->AHL20(2) ---AtMYB61------->GAMYB       --------->ALFIN1<---------MYB52(1)--------->YAB1   <------ZmHOX2a(1) <   tctctgaacttaaccgccggttccgattcggaggggttggtttaatccggttgggttattaacaaaataataaagtgaattacaggagttttagcaattg  8726400                                       --------->ATHB12                                       <---------AHL20(2)                                      --------->AHL20(2)                                      <---------AHL20(1)                                   --------->AHL20(2)                                   <---------AHL20(2)                                  --------->AHL20(2)                                  <---------AHL20(2)                                 <---------YAB1                               <---------ICU4                               <---------AHL20(2)                               <--------HAHB4                               -------->HAHB4                               -------->ATHB1                               --------->ATHB51                               --------->YAB1                         --------->TOE2(3)            <---------AHL20(2)                    <---------AHL20(2)--------->AHL20(1)                   --------->AHL20(2) <---------AHL20(2)         <---------AHL20(2)          --------->CCA1(2)   --------->ICU4         <---------AHL20(2)                         -----         --------->AHL20(1)   <---------ATHB51       --------->AHL20(2)   <----------DOF2   --------- ----------DOF2----------->GT1<---------YAB1  <------ZmHOX2a(1) --------->AHL20(2)     ---------->DOF2   ttcttttgaaatatatgaagataaaattcttaattattaatttattgaggagctattaatttgaaatttaaaatttcttttttttttgttaaagaatgtg  8726500                                                                                                 <---                                    <-----------GT1                                              <---                                  <---------AHL20(2)                                             ----                           --------------------->WRI1                                            ----                         <---------AHL20(2)                                                   <------MYB83                         --------->AHL20(1)                                                   <------MYB46(1)                     --------->AHL20(1)                                                      --------                     --------->AHL20(2)                                                      <-------  <---------AHL20(2) <---------AHL20(2)          <---------YAB1                              <------- --------->AHL20(2)  <---------AHL20(1)     ------>MYB46(1)                                 <-------- <---------AHL20(2) --------->AHL20(2)    <---------MYB59                                  <---------ARR14(2) ------>GT1         <---------AHL20(2)--------->ETT(2)                                     --------->ARR14(2) >GLK1(2)----------->GT1 --------->AHL20(2) ------>MYB83      --------->AHL20(2)       <---------LBD16   gtattaatttggagtaaaacaaataaattttttgattttatcgacctacatatgtttgagaaaaaaaaatcagtgtctaatttggataactcggattggt  8726600  Previous    Next  AGI:  At2g20190.1    Description:  ATCLASP/CLASP; binding. similar to hypothetical protein OsJ_007307 [Oryza sativa (japonica cultivar-group)] (GB:EAZ23824.1); similar to hypothetical protein OsI_007935 [Oryza sativa (indica cultivar-group)] (GB:EAY86702.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40499.1); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024); contains InterPro domain HEAT (InterPro:IPR000357); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989) Range:  from: 8718677    to: 8726099    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version