Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100           --------->ARR14(2)   <---------ARR14(2)   --------->ARR14(2) --------->LBD16 -------->LBD16 -------->ANAC55(1) -------->ANAC58                                          ----------->RAV1(1) -------->ANAC46                                          --------->ANAC58                         -- -------->ANAC58                                          --------->ANAC46                        --- --------LBD16              <-----------HVH21             --------->ANAC58                     ------ ---->P  <---------ARR14(2)--------->bZIP60(2)         --------->MYB52(1)            --------->ANAC46 ------REM1(2)            <------NtERF2               --------->AtMYB61<------ZmHOX2a(2)    --------- ->TOE2(3)     <------ZmHOX2a(2)                     --------->MYB46(3)<---------ATHB12     --------- -GT1  --------->ANAC46   --------->LBD16    --------->YAB1   ---------->DOF2       ---------->DOF2--   acccggaacccgatacgatccatcgggccgggtcacgacgaatgcaaatataagaaccaccagcaaaagtccgatcaatatcgccatacagcacaagtaa  8481800 ------->ANAC46              <---------YAB1 ------>MYB46(3)   ------->TEIL ---->DOF2     --------------->AtSPL8 >ANAC58      <---------ANAC46                    <----------DOF2                             <------ >ANAC58      <---------ANAC58    <---------At4g35610                                      <---------ARR11(3) ----->GAMYB  <---------ANAC58    --------->At4g35610 <---------YAB1                       --------->ARR11(3)   accgccagtagagtttccttgtacctgaaatatgagagctcaaagtttacatctttatgattcaatttgtgtctatgttttcaaagtcttgaagttcttt  8481900                 --------->At4g35610 ----------->HVH21                --------->DEAR3(1)  --------->ATERF1(1)               --------->RAP2.3(1) <---------ATERF1(1)               <------NtERF2      <---------ARR14(2)               --------->ATERF1(1)--------->ARR14(2)              <---------ATERF1(1)<------NtERF2              ------>NtERF2 ----------->HVH21              <---------RAP2.3(1)--------->ATERF1(1)                    <---------WRKY38(1)             --------->DEAR3(1) --------->LBD16                     ------->GAMYB             <---------DEAR3(1)<---------ANAC46                  --------->MYB52(1)            --------->RAP2.3(1)<---------ANAC58              --------->ANAC58            --------->ATERF1(1)<---------ANAC58             --------->SPL7          <---------WOX13(1)     <---------ANAC58       --------->ALFIN1               <------ZmHOX2a(1)------->GAMYB     <---------ANAC58     <-----------RAV1(1)           ------>NtERF2   <---------WRKY12  <---------ALFIN1     <---------ANAC46   ----------->RAV1(2) <------ZmHOX2a(1)--------->ANAC58   <------ZmHOX2a(1) ----DOF2  <---------ATERF1(1)<---------LBD16          --------->DEAR3(1)--------->MYB52(1)   gattcttacttgtaggcgccgatgaagcctgtggcggagacgacgaggatgagaacgccgaggacgacaacgggccaacggaggagattgacacactcgt  8482000                                  --------->ATHB12                                 <---------MYB52(1)                                --------->At5g28300                                <-------GAMYB                             ------>NtERF2                                                    -------                            --------->bZIP60(1)                                               -------              --------->ANAC58<------NtERF2                                   <---------MYB52(1)    -              --------->ANAC58<-----------------AG                  <---------ANAC58          -------     <----------DOF2       --------->SPL7                           <---------ANAC58        ---------    <---------ANAC58     ----------->TGA1              --------->ZAT6        <-------GAMYB  ---------    <---------ANAC46     ----------->HVH21             --------->ANAC58--------->ARR14(2)   <--------    <---------ANAC58   ----------->RAV1(2)             --------->ANAC58<---------ARR14(2) --------->DOF5.7(2)   tgtctggctttgaagctagccatatacctgacgccgttattggtatggaacagagtaacgctagtaagttgagtatcgccgttaagttattcgctaacgc  8482100                                            <----------DOF2                                            <---------------AGL15                                            <---------DAG2                                            --------------->AGL15                                           ----------------->AGL3                                           <-----------------AGL3                                           <-----------------AGL1                                           <-----------------AGL2      <-----------GT1                      <-----------------AG --------->AHL20(2)                        ----------------->AGL2 <---------AHL20(2)                    <---------ANAC58 <---------AHL20(1)                    <---------ANAC58 -->ANAC58                           --------->CCA1(2)                --------->YAB1 -->ANAC46                          <---------ARR14(2)             --------->YAB1 -------->AHL20(2)                  --------->ARR11(1)            --------->ICU4 -->ANAC58                          <---------GLK1(2)             <---------ATHB51<---------ANAC58 ->DOF2 <-----------GT1             --------->ARR14(2)        --------->AHL20(2)  <---------ANAC58 >MYB52(1)                    <---------HSFB2a(2)    ---------->DOF2 <---------YAB1 --------->ALFIN1 -DOF5.7(2)            <----------DOF2<-------TEIL<---------TOE2(3)<---------ICU4<------ZmHOX2a(1)---   cattaaattttctctctctctctctctttgttcttgaagattcgtgctttttatggaaagaaaatgaaataatgagagtgagaggagtgtctctgttttt  8482200                               --------->ATHB12                      <-------GAMYB                     <---------MYB46(3)                     --------->MYB55(2)                   <-------GAMYB                   <---------MYB52(1)                  <------MYB83--------->ICU4                  <---------DEAR3(2)                  <------MYB46(1)                                                         <----------                 --------->MYB111(2)                                                      <---------SPL7                 --------->MYB55(2)                                                    --------->SPL7                 <---------MYB46(3)                                                 <------MYB83                 --------->MYB111(1)                                                <------MYB46(1)                 --------->MYB46(2)                                                --------->MYB59                 <---------DEAR4(1)                           <-----------GT1      <---------AtMYB61  <---------ICU4 <---------DEAR3(1)                  <---------At5g28300         <---------MYB52(1) --------->ICU4  <---------DREB2C(2)    ----------->GT1   --------------->AGL15<------MYB46(1)------- ------->ID1    <---------ORA47(1) *TSS <---------ANAC46  <---------------AGL15<------MYB83   -------   gtcttaatgacttatgaggtcggtggttagagatgatgggatgtgtgaaaccagttactgctatttacagaaaacgatgttcggtttggtccggtccggt  8482300                                     <---------MYB46(3)               <---------TOE2(3)                                    <---------AtMYB61      --------->ARR11(3) -HVH21                           ------->GAMYB            <---------ARR11(3)                       < ---->GT1       --------------------->WRI1  <---------TOE2(3)         <---------TOE1(3)       ------- -->LBD16  <---------At4g35610 --------->MYB52(1)---------->DOF2     ---------->DOF2          <------   taatcactgattttgctgatttggatttttcgacaacggtggttttaagaaaaaagaattagatattggattaaagttaacatgtgaatgtcagaataaa  8482400                                                                                   ==================                                                                                   <----------DOF2                                                   --------->ICU4             --------->DEAR3(2)                    <------MYB46(1)           --------->bZIP60(1)          <---------SPL7                    <------MYB83              <---------bZIP60(1)          ----------->HVH21           --------->YAB1                     <---------TGA2(1)            <---------DEAR3(2)          <---------ATHB12                    ----------->GT1             --------->ETT(1) ---------YAB1     --------->MYB59     <---------ANAC58       ----------->GT1<---------ARR14(2) -->AHL20(2)  --------->DAG2           <-------GAMYB---------->DOF2     <-----------HVH21 ---AHL20(2) ---------->DOF2           <---------ANAC58   --------->ARR11(3) --------->ARR14(2)   atatgtttagcaatgaaaagttaggttttgaacaagttttgggttgtgatgtaataaagagaacttgttaatctggtcggaccggcttttggtttagaat  8482500                         --------->ANAC58                         --------->ANAC55(2)                         --------->ANAC46                         --------->ANAC58                         <---------ANAC55(2)                       <---------GLK1(1)                       --------->CCA1(2)                      --------->ARR14(2)                      <---------ARR14(2)                      --------->ARR11(1)                    ----------->ARR10                  <-------PIF5                                                                      -                  ------->MYC4                                                                      -                  <-------MYC3                                                                      <                  ------->MYC3                                                                      <                  <-------MYC2                                                                      <                  <-------MYC4                                                                      -                  ------->MYC2                                                                      -                 --------->TGA1a                                                                   --                 <---------TGA1a                                                                   >>                 --------->O2                                                                      ==                 <---------O2                                                                      --                 ==============================bZIP_DOF                                            --                 <---------ANAC55(2)                                                               <-                 <---------ANAC46   <----------DOF2                                                <-                ------------>OsbHLH66         <---------YAB1                     -------->P    <-----             ----------------->PIF3(1)   <---------ZAT6                          ====================             <-----------HVH21    ----------------->AGL1                        --------->WOX13(1) --            ----------->HVH21 <---------At4g35610                              --------->MYB46(3)  <- <---------GLK1(2)------->PIF5--------->At4g35610                   <---------At5g28300        <----- ==========================bZIP_DOF<---------DAG2                  <-----------GT1--------->MYB46(3)<   ttggaatcttgaacgggacacgtggatacgcgagatgccttttgtgttaatattcttccattctgcgagttaccgaatgcatcaaccagtgagaactatc  8482600       --------->DREB2C(2)       ----------->HVH21       --------->At1g77200       --------->DEAR3(1)      --------->ATERF1(1)      <------NtERF2      --------->ORA47(2)      --------->DEAR3(2)     ------>NtERF2    <---------PCF2   <---------ABI4(2) --------->ALFIN1 ------>PIF5 ------>MYC4 -------MYC2 -------MYC3 -------MYC4 ------>MYC3 ------>MYC2 ------->TGA1a >>>>>>>>HY5 ========================bZIP_DOF ------->ANAC46 ------->O2                                    --------->ETT(2) --------TGA1a                             <---------ANAC58                                    <----- --------O2------>NtERF2                 <-----------GT1                                       ------ ------------PIF3(1)                    <<<<<<<<<MYB98                                         <----- ========MYC_MYB                     <---------TOE2(2)                                         ------ ------->PIF3(3)                     ------->TEIL                                      <---------GLK1(1) --------PIF3(3)           <---------AtLEC2<---------ANAC58                            --------->GLK1(1) -----------PIF3(2)<-----------HVH21 <---------TOE1(2)      <---------------AGL15 <---------LBD16<--- -------PIF5  <----------DOF2    ------->TEIL  <---------ETT(2)           >>>>>>>>>>>>>>>>>LFY<------   cacgtggcaccgacgactttgggtcatttgcattgaacgtatgttactttcgacagagaatgcaaaatggagtaagttccattgttcggaaatcggaatt  8482700  Previous    Next  AGI:  At2g19580.1    Description:  TET2 (TETRASPANIN2). similar to TET1/TRN2 (TETRASPANIN2) [Arabidopsis thaliana] (TAIR:AT5G46700.1); similar to unknown [Populus trichocarpa] (GB:ABK93550.1); contains InterPro domain CD9/CD37/CD63 antigen; (InterPro:IPR000301) Range:  from: 8479216    to: 8482235    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g19582.1    Description:  other RNA Range:  from: 8481528    to: 8482303    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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