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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                                                              <-----
-------->LBD16                                                                                ------
----NtERF2 <---------At4g35610              <---------YAB1                                  <-------
-------LBD16    <---------ZAT14             --------->ICU4                                  ========
-->NtERF2  --------->ZAT2    --------->ARR11(3)                                             --------
----->MYB52(1)  --------->ZAT14     <---------ANAC58                                        <-------
--->ZAT18 ----------->RAV1(1)--------->GLK1(2)                                --------->DEAR3(1)
----ABI4(2)--------->At4g35610      <---------ANAC58         --------->ZAT14<---------At4g35610
->ANAC58--------->At4g35610  <-----------ARR10      >>>>>>>>>TBF1      <----------DOF2      --------
->ANAC58<---------At4g35610 <---------GLK1(2)--------->YAB1  <---------ZAT14--------->At4g35610
 
accggaatgtaagcagcagtgaagaagtgaagaatcttggcttagttatgatgaagaagaagagtgaagagtgtctttgagccgaggttgtgtttcttta  8448200
                                            <------MYB83
                                            <------MYB46(1)
                                        --------->ATHB12
----AHL20(2)           <---------AHL20(2) <---------WOX13(1)
--->AHL20(2)          --------->AHL20(2)<---------MYB46(3)      --------->AHL20(2)
--------AGL15        <---------YAB1  <---------ANAC58  <---------AHL20(2)          <------MYB83
===================================================================MADS_MADS       <------MYB46(1)
->TOE2(3)      ----------->GT1       <---------ANAC58  --------->AHL20(2)         --------->MYB59
---DOF2    <---------SPL7          <---------ANAC46<---------------AGL15          <---------AtMYB61
------->AGL15<---------LBD16    xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)         <----------DOF2
 
atttgcagagtcatggtccggtttattatatatcagttttgggtgattggtttgctatttaaaaaaaaaaaatgggttctttggtttggtttgtgtctct  8448300
                --------->ARR11(3)
                <---------ARR11(3)
               --------->YAB1                              --------->GLK1(1)              --------->DOF5.7(2)
              --------->ICU4     <---------ANAC46    <-----------HVH21                   --------->TOE2(3)
      <----------DOF2    ------->TEIL       <---------ANAC58                       ------>ZmHOX2a(1)
   ---------->ID1     <---------YAB1        <---------ANAC58                   <-----------GT1
  <-----------GT1 ------>ZmHOX2a(2)      <-----------RAV1(1)                  <-----------GT1
 
tgatttttccttttgtaatgatcttatgaatttgtttcgagttaatgtcgttctctggtcagatttcgaattcaattctatttatcctccctcgttaatg  8448400
                                                                          --------->AHL20(2)
                                                                       <---------ICU4
                                                                      <---------ATHB12
                                                                <-----------HVH21  <---------ATHB12
                                                            ------>MYB46(1)       ------>MYB46(1)
                                                            ------>MYB83  <---------AHL20(2)
                                                          <---------MYB46(2) <-----------GT1
                                                   ------>MYB83----------->GT1    ------>MYB83
                                                   ------>MYB46(1)    --------->ICU4 --------->WOX13(1)
                                        --------->AHL20(2)<---------MYB59 --------->YAB1
                                   ------>ZmHOX2a(2)<---------ICU4    <---------ATHB51         <----
                           <---------TOE2(3)      ----------->RAV1(1) --------->AHL20(2)--------->YAB1
             --------->GLK1(2)<---------WOX13(1)--------->MYB46(3)    <---------AHL20(2)--------->TOE2(3)
 --------->GLK1(2)         <---------YAB1<---------AHL20(2) --------->MYB52(1)   --------->WOX13(1)
 
agagaatttgtgagacaatctagtttacttaagattgatcgaattttataaaccaacattaccaaaccgtcaaataattaaaaccaatcaatcttattta  8448500
                                                                                         ---------->DOF2
                                                                                     ----------->GT1
                                                                                   <---------ANAC46
                                                                                 <---------RAP2.6(3)
                                                                                 ------>NtERF2
                                                                                --------->DEAR3(1)
                 <---------ATHB12                      <----------ID1         --------->At4g35610
               --------->WOX13(1)                    ---------->DOF2          ------>NtERF2
             <---------ATHB12                     --------->LBD16       --------->ARR11(3)
    <---------AtLEC2                            <---------LBD16         <---------ARR11(3)
-------GT1   ------------>CBF   xxxxxxxxxxxxxxxx>smallRNA(i)---------->DOF2   <---------At4g35610 <-
 
tcggtttgcataacccatcaatgagccggtttagacatcggtttgagtttctctgggaaagacaaaagtcaaaaacatctctgccgacttgtaaaagacc  8448600
                                                    --------->TOE1(3)
        *TSS                                        --------->TOE2(3)
      --------->GLK1(1)                      --------->TOE2(3)
   ------->GAMYB                             --------->TOE1(3)
----------->RAV1(1)                   --------->ANAC58                      <-----------GT1
-----ZmHOX2a(2)--------->AHL20(2)     --------->ANAC58              <----------DOF2
 
gatcaacagaaacccaaaaaaaatagttgaaacggagggaaacgaaaacctaaaaccctaaaaaactcttccttttttttttccagtgaaatttctcttc  8448700
                                     <---------HSFC1(2)
                                     <---------HSFB2a(1)
                                     --------->HSFB2a(1)
                                     --------->HSFC1(2)
                              <-------GAMYB
                             --------->MYB111(1)                     ----------->GT1
                             --------->MYB52(2)                      <---------MYB46(3)
                             --------->MYB111(2)                  <-----------RAV1(1)
                             --------->MYB46(2)                ------->TEIL   --------->DAG2
                             --------->MYB55(2)                --------->ARR14(2)
                             <---------MYB46(3)                <---------ARR14(2)
                            <--------P <-----------GT1        <---------CCA1(2)  --------->ALFIN1
   <---------MYB52(1)   --------->HSFB2a(2)           --------->MYB52(2)     ---------->DOF2 <------
 
ttctccgttttcatacaagtctgacttctgggtagttggaattttccagtttttggtttgtttctgtatctgtggtttaaaaaagtggagaagaagcttt  8448800
                        --------->ANAC46                                            --------------->AGL15
                 <------ZmHOX2a(1)                                                  <---------------AGL15
                ----------->ARR10                                                  =================
             <---------ANAC58                                                      <----------------
             <---------ANAC46 --------->TOE2(3)            <-----------TGA1        <----------------
   <----------DOF2<---------ARR14(2)                       <-----------HVH21       <----------------
  <---------ANAC58--------->ARR14(2)           <---------ARR11(3)           <---------ANAC58
  <---------ANAC58<---------GLK1(2)            --------->ARR11(3)           <---------ANAC58
----DOF2     <---------ANAC58----------->GT1  --------->At4g35610           <---------ANAC46      <-
 
ttagtgcttttctatggcgaggattctccgaaacgtttattcactgagaagctctctgttttcgtcagaggtatgtttatcgtgtttctcatttgggtat  8448900
                                      --------------->AGL15
                                      <---------------AGL15
                                     <-----------------AG
                                     <---------ANAC46
                                     <---------ANAC58
                                     <-----------------AGL2
                       <-----------RAV1(1)
=======================================================MADS_MADS  --------->GLK1(2)
-AG                  <---------At5g28300                          --------->ARR14(2)
-AGL2 --------->AHL20(2)        --------->ATHB12                  <---------ARR14(2)
-AGL1 <---------AHL20(2)       <---------YAB1                ---------->DOF2
--------ANAC55(2)  <---------MYB52(1)<---------ANAC58  --------->YAB1
 
tacgagaaattaaaaaaactctgttactgtcgttttcattgcttatttgggtattcattcatgagaaagaatccgaaatgttgtctcttaatttgaattc  8449000
                                                                      <------MYB83
                                                                      <------MYB46(1)            ---
                                                                  <---------MYB46(3)             <--
                                                                  --------->MYB55(2)          <-----
                                                                 --------->ALFIN1        --------->LBD16
                  <---------YAB1                                 <---------AtMYB61  <---------At4g35610
               ----------->GT1                      <---------ANAC46<--------P      --------->At4g35610
       <---------LBD16                           <---------MYB52(1)<-------GAMYB    <---------ZAT2
<----------DOF2--------->ICU4            --------->ALFIN1      --------->ALFIN1     --------->ZAT2
 
attctttttttctgggtaatgtttattgacaagggtttcatggggttttgcagttacttagaagaagtgtggttggaacatcgtttcagctccgaggctt  8449100
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AGI:  At2g19480.1   
Description:  NAP1;2/NFA2 (NUCLEOSOME ASSEMBLY PROTEIN1;2); DNA binding. similar to NAP1,3/NFA3 (NUCLEOSOME ASSEMBLY PROTEIN1,3), DNA binding [Arabidopsis thaliana] (TAIR:AT5G56950.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45713.1); contains InterPro domain Nucleosome assembly protein (NAP); (InterPro:IPR002164)
Range:  from: 8445538    to: 8448430    Orientation: Forward
Links:  TAIR  MIPS 
 
AGI:  At2g19490.1   
Description:  recA family protein. Identical to DNA repair protein recA homolog 3 [Arabidopsis Thaliana] (GB:Q9ZUP2); similar to RECA3 (RECA HOMOLOG 3), DNA binding / DNA-dependent ATPase [Arabidopsis thaliana] (TAIR:AT3G10140.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65339.1); contains InterPro domain AAA+ ATPase, core; (InterPro:IPR003593); contains InterPro domain RecA bacterial DNA recombination; (InterPro:IPR001553); contains InterPro domain RecA (InterPro:IPR013765)
Range:  from: 8448609    to: 8451252    Orientation: Forward
Links:  TAIR  MIPS 
 
 
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