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UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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     ------>ZmHOX2a(1)                              --------->ICU4
     <---------YAB1                   --------->GLK1(1)
    --------------->AGL15             <---------GLK1(1)  >>>>>>>>>ARR2                      --------
    --------->TOE2(3)                <---------ARR11(3)  >>>>>>>>>ARR1                      --------
  ---------->ID1                     --------->ARR11(3) --------->ATHB12        --------->ANAC55(2)
 <-----------GT1                 ---------->DOF2 --------->ARR11(3)             --------->YAB1 -----
--------YAB1                --------->ANAC46 <---------ZAT14      <---------ARR14(2)  --------->TOE2(3)
-------AHL20(2)      <---------AHL20(2)      --------->ZAT14      --------->ARR14(2)  ------->GAMYB
-------AHL20(1)     --------->AHL20(2)--------->CCA1(2)<---------YAB1           --------->ANAC46  --
-----AHL20(2)  <---------YAB1 --------->ANAC46   <---------ARR11(3)  <-----------GT1 --------->MYB46(3)
 
tatttttccttattgattatcaattttatatacacaaaaagatatcagtgaagaacttatgattgtgcatattttctgtccatacataaccacaatatta  8228300
                     <---------RVE1(1)
                     <---------CCA1(1)
                    <---------ARR11(3)
      --------->AHL20(2)           <---------YAB1     --------->AHL20(2)
->YAB1<---------AHL20(2) <<<<<<<<<<GT-3b              <---------AHL20(2)                    --------
->TOE2(3)  <---------AHL20(2)    --------->YAB1   <---------AHL20(2)                   --------->AHL20(2)
---->WOX13(1)       --------->ARR11(3) --------->AHL20(2)     --------->ARR11(3)    <----------DOF2
------->YAB1   --------->TOE2(3)<---------YAB1----------->GT1 <---------ARR11(3)  ---------->ID1
 
atcaaaaatttaaatttatcttagatatttttcttatgataattcaatactgtataattttttaaaatctatacattacagttttgtcttttaaatcata  8228400
                                                                                              <-----
                 ----------->GT1                                                              ------
                <---------HSFB2a(2)       <---------AHL20(2)                                <-------
                --------->HSFB2a(2)       <---------AHL20(1)                          <---------TOE1(3)
             --------->ARR11(3)           --------->AHL20(1)             ------>ZmHOX2a(1)  <-------
             <---------ARR11(3)           --------->AHL20(2)            --------->TOE2(3)   <-------
            --------->RVE1(1)            --------->AHL20(2)           <---------YAB1  <---------TOE2(3)
->YAB1      --------->CCA1(1)            <---------AHL20(2)  <---------ANAC46    <---------ZAT6-----
 
ttctaatatgcataaatatctagaaaaatactaactccatagaattaaatttcttatgtaagtttagtatattatcctaaatttgtgttaatgttaagat  8228500
                                                --------->AHL20(2)
                                                <---------AHL20(2)
----ARR11(3)                                --------->AHL20(2)                            ----------
--->ARR11(3)                    <---------------AGL15                                     <---------
--YAB1                          ====================================================================
--TOE2(3)                      <-----------------AGL2                                  <-----------GT1
--TOE1(3)          ----------->GT1     ----------->GT1    --------->GLK1(2) <------ZmHOX2a(2)
---->GLK1(1)     ---------->DOF2--------------->AGL15    <---------GLK1(2)<------ZmHOX2a(1)
 
ttctactaaatttgatactcaaaagtaaaaagtttctcttaatagaaaaaaataaatatagattctcttacattacaggatcagagtataaaaccagttt  8228600
                                          --------->AHL20(2)
                                          --------->YAB1
                                         <---------YAB1
                                      <---------AHL20(2)
                                      --------->AHL20(2)
                                     <---------AHL20(2)
                           <---------ARR11(3)
                           --------->ARR11(3)
                          <---------GLK1(1) <---------YAB1
                          --------->GLK1(1) ----------->TBP
----->AGL15             --------->YAB1<---------YAB1                   <-------TEIL         --------
------AGL15             <XXXXXXXXXXXXXXXXXXXXMIR4243                  <-----------GT1      <------ZmHOX2a(1)
======MADS_MADS        <---------YAB1--------->AHL20(2)    ---------->DOF2             ---------->DOF2
 
aagtaaacaatgtttcaaaaaacagtatgatatctgaaattttaattataaaaccaaaaatccaaagtcaaatatacgttttccaagtgagaaaggaccc  8228700
                   <---------ICU4
                   --------->YAB1       ------->GAMYB                                             --
            *TSS  <---------YAB1     --------->MYB52(1)                                           <-
            --------->ATHB12     <---------ICU4                                                <----
           --------->MYB46(3)   --------->ICU4                                                 <----
          -------->P            <---------YAB1                                         ---------->ID1
         ------->GAMYB       <---------ATHB12                                        <---------ANAC46
        --------->MYB46(3) ------>MYB46(1)                                           <---------ANAC58
------------>CBF--------->YAB1--------->YAB1                               --------->ALFIN1  <------
->PCF2<-----------GT1      ------>MYB83--------->MYB46(3)    ---------->DOF2         <---------ANAC58
 
ataaacaattaacaaccattgatgatcaccaaatcataatcaacggtcgaaatgaatgaaaaataaaagtctgaaacggtggagagtttcgtcgttttga  8228800
                           ------>ZmHOX2a(1)
                           --------->At4g35610                    --------->ALFIN1
                     --------->ARR14(2)                         <---------ANAC46
                     <---------ARR11(3)      <---------DAG2   <---------ANAC58
                     --------->ARR11(3)      <----------DOF2  <---------TGA1a               --------
      ---------->DOF2<---------ARR14(2)      ===========================bZIP_DOF            --------
   <---------YAB1   <---------CCA1(2)  --------->At4g35610    <---------ANAC58              --------
--------->GT1      <---------ARR14(2)  --------->ZAT2         --------->TGA1a           xxxxxxxxxxxx
--------MYB46(3)   --------->ARR14(2)<---------GLK1(2)        <---------O2           ----------->GT1
-----ANAC58     <---------ANAC58   ------->GAMYB              --------->O2  ----------->HVH21-------
-----ANAC58     <---------ANAC58   =====================================MYC_MYB     --------->ALFIN1
---YAB1         <---------ANAC46----------->RAV1(1)           <---------ANAC46  ------>ZmHOX2a(2)
 
gtggttataaaaagagaaggcgtatatctcctctgcaacagaagctcgctttctctctctctctctcgtgtgtgtgtgtgtgatcgagtggtgaaacgac  8228900
       <------NtERF2                                --------->CCA1(2)
     <---------ANAC58                               --------->GLK1(1)
     <---------DEAR3(1)                            <---------ARR11(3)
     <---------ANAC46                    <---------At4g35610                    <---------YAB1
     <---------ANAC58                    --------->At4g35610                ----------->GT1
--------->ALFIN1                        >>>>>>>GRF7--------->ARR11(3)     ------>ZmHOX2a(2)
--->HVH21                            <-----------HVH21                  --------->ARR11(3)
->ANAC58                           --------->ARR11(3)                   <---------AGP1
->ANAC58  <---------MYB52(1)       <---------ARR11(3)                 --------->WRKY12
xxxxxxxxx>smallRNA(se3)   --------->HSFB2a(2)--------->HSFB2a(2)     <---------MYB52(1) <---------GLK1(2)
---->RAV1(1)              <---------HSFB2a(2)<---------HSFB2a(2)    <-------GAMYB   <-----------GT1
 
agagaggggcgtcgttttgttgatttcttctgggtgaagatgtcaggtctcgaagatatcaagaacgagaccgttgatctggtattatttcgattctctt  8229000
                                                                                                 <--
                                                                                                <---
                                                                                             <------
                                                                                          ------>ZmHOX2a(2)
                                                                                         <------ZmHOX2a(2)
                                                                         <----------DOF2<---------ARR11(3)
                                                                         <---------------AGL15  <---
                                                                         --------------->AGL15  <---
                                                                        <---------ANAC58--------->ARR11(3)
                                                                        <---------AtLEC2<---------AGP1
                                  <---------ZAT6      ---------->DOF2   <---------ANAC58--------->AGP1
                   --------->AHL20(2)        <---------ICU4             <---------ANAC46--------->ARR14(2)
 <----------DOF2   <---------AHL20(2)     --------->YAB1          --------->ATHB12      <---------ARR14(2)
 
ctcgcttaaattcttcgagtttttaatttcatttttagtgtttattcatcatgcccacaaagtgttcgatgatttgcttgaatgagaaatagatctgttt  8229100
           <---------AtLEC2
       <---------ANAC58
       <---------ANAC58
       <---------ANAC46
      --------->MYB52(2)
-----GAMYB <---------ANAC58            <---------DAG2          <---------YAB1           ------>ZmHOX2a(2)
------ANAC58                           <----------DOF2         <---------ATHB12         ============
---MYB52(1)<---------ANAC58        <-----------GT1           <---------At4g35610  <----------DOF2
------ANAC46                   <----------DOF2       <---------ICU4        <----------DOF2        --
------ANAC58       <-----------GT1<-----------GT1   <---------ATHB12       <---------DAG2        <--
 
cgttgttgttccttgcatggtttcacgtttgattcttttacccttttttcttcaaatcattttccgatgattctactccttttttctttgatcgaaaact  8229200
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AGI:  At2g18960.1   
Description:  AHA1 (ARABIDOPSIS H+ ATPASE 1); ATPase. Identical to ATPase 1, plasma membrane-type (AHA1) [Arabidopsis Thaliana] (GB:P20649;GB:O64626); similar to AHA3 (Arabidopsis H(+)-ATPase 3), ATPase [Arabidopsis thaliana] (TAIR:AT5G57350.1); similar to AHA2 (Arabidopsis H(+)-ATPase 2), ATPase [Arabidopsis thaliana] (TAIR:AT4G30190.1); similar to AHA9 (Arabidopsis H(+)-ATPase 9), hydrogen-exporting ATPase, phosphorylative mechanism [Arabidopsis thaliana] (TAIR:AT1G80660.1); similar to Plasma membrane ATPase 4 (Proton pump 4) (GB:Q03194); similar to plasma membrane H+-ATPase [Lycopersicon esculentum] (GB:AAB17186.1); similar to H(+)-transporting ATPase
Range:  from: 8228713    to: 8234704    Orientation: Forward
Links:  TAIR  MIPS 
 
 
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