Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100              --------->YAB1          ------>MYB46(1)           <---------YAB1          ------>MYB83            <---------ICU4          --------->MYB52(1)      --------->YAB1        <---------MYB46(2)        -------->HAHB4        <---------MYB59          --------->ICU4                                                   <--        <---------MYB111(1)    --------->YAB1                                                    ----       <---------ANAC55(2)    <---------YAB1                   <<<<<<<<<WRKY18          --------->HSFB2a(2)       --------->ANAC55(2)  --------->YAB1      <---------AHL20(2)                  <----------DOF2   <---------ICU4           --------->TOE2(3)   --------->AHL20(2)    --------->At4g35610        ----   -------->HAHB4      --------->ANAC58  ----------->GT1     <-----------HVH21 ---------->DOF2  -----   --------->YAB1      --------->ANAC58------->TEIL     <----------DOF2 <----------DOF2 <---------HSFB2a(2)   gctaataatacctaacataatcaacaagaaccataataatgaatcgaaatataaatttctttctgtcaaaacagctttcaacaaagctttctagtaacat  8204000                                 --------->At5g28300       <----------ID1           ----------->GT1 -------SPL7                  <---------ZAT14                 ----------->GT1 ----->TOE1(1)         --------->ARR14(2)                    <---------TOE2(3) ----->TOE2(1)  <----------ID1--------->ZAT14                <---------TOE1(3) ---------->AtSPL8     <---------ARR14(2)       --------->ANAC46  ---------->DOF2                 ---   cgtaccaataccacaaatgagacaaaattcgctacagtaaaacaaaatcaacaccacaaatttagggtaaaagtcaagaagagcaaactcaccaatttcg  8204100                                                                                                  <--                                                                                                *TSS                                                                                             --------                                                                                            <--------                                                                     >>>>>>>GRF7      --------->WRKY12             <---------ZAT2                                       <-----------HVH21   --------->WRKY38(1)             <---------At4g35610                               <-------GAMYB          --------->WRKY45             --------->At4g35610                         --------->YAB1             --------->At4g35610             --------->ZAT2                              --------->ATHB12<-------TEIL ----------->HVH21   <---------ARR11(3)            --------->TOE2(3) --------->TOE2(3)<-----------RAV1(2)------>NtERF2<  <---------ATHB12          ------------>CBF      --------->YAB1 <---------MYB46(3) <---------At4g35610 --------->CBF          ----------->GT1     <---------ZAT6     ======================================   accaataacttcttcagctcgataaccagtaacaatctcaaaaacagtgttaacataaatgatagggttgtcaggttcaagagcatcgctgaccacaaac  8204200         <---------SPL7        <---------ANAC46        <---------ANAC58              <---------ARR14(2)        <---------ANAC58              --------->ARR14(2)        --------->DEAR3(1)         --------->ANAC58       <------NtERF2               --------->ANAC58       --------->ATERF1(1)      <---------ARR14(2)                         ------>NtERF2      ------>NtERF2           --------->ANAC46                            --------->DEAR3(1)      <---------RAP2.3(1)     --------->LBD16                             --------->ANAC58      <---------ATERF1(1)    <---------HSFB2a(2)                          --------->ANAC58     <---------DEAR3(1)      --------->HSFB2a(2)                          --------->ANAC46     --------->DEAR3(1)     <---------LBD16                      ------>MYB83    --------->RAP2.3(1)     <-----------------AGL1               ------>MYB46(1)    --------->ATERF1(1)     ----------------->AGL1            --------->MYB46(3)   <---------ATERF1(1)     -------->P <---------GLK1(2)       <---------HSFB2a(1)  <---------O2             ------>MYB46(1)                    <---------HSFC1(2)  <---------DEAR3(1)       ------>MYB83                       --------->HSFB2a(1)  --------->O2            --------->MYB55(1)                  --------->HSFC1(2)                    -  --------->TGA1a        --------->AtMYB61                  ------>MYB46(1)--------->LBD16  ---------  --------->ANAC58       <---------MYB111(2)              <---------MYB46(2)                <--------  --------->ANAC46       <---------MYB59                  --------->MYB46(3)               --------->DEAR3(1)  --------->ANAC58       <---------MYB46(2)               --------->DEAR3(1)        <---------At4g35610  <---------TGA1a        <---------MYB55(2)               <---------MYB52(2)   --------->bZIP60(2) <-  ==================================MYC_MYB               <---------MYB55(2) <---------ALFIN1   ----- -------ALFIN1           --------->MYB46(3)     <---------MYB52(1)--------->MYB46(3)--------->At4g35610 ->AtMYB61   <-----------RAV1(2)--------->ARR14(2)       --------->ANAC46<---------LBD16<---------ALFIN1 -MYB52(2)----------->HVH21--------->MYB52(1)   --------->DOF5.7(2)     ============================= ---------ALFIN1<------ZmHOX2a(1)--------->MYB52(1)    <---------ALFIN1 ============================= ===========MYC_MYB      <---------MYB111(1)   <-------GAMYB------>MYB83------>ZmHOX2a(1) --------->MYB46(3)   ccacacggcgccgtgccaggaagactacctaccggaaacggaatcgctccgttatctccaccgaaccatccatcctccgccacttcatctccaccgctga  8204300                                                                                      <------ZmHOX2a(1)      <-----------GT1                            ---------->DOF2                   <-----------RAV1(2) ----->ZmHOX2a(2)                          --------->ANAC46                      ----------->RAV1(1) >At4g35610     --------->ANAC58         ----------->RAV1(1)                     ==================== -At4g35610     --------->ANAC58         --------->ANAC46                      --------->At4g35610 -----ZmHOX2a(2)--------->ANAC46        --------->MYB46(3)                     <---------At4g35610 ------>ARR10 <---------ALFIN1         --------->ANAC58                       --------->ANAC46   ---- ======HOX2a_HOX2a                     --------->ANAC58     --------->ZAT18 ------>ZmHOX2a(1)    <--- =====HOX2a_HOX2a                    --------->ANAC46   *TSS<---------ZAT18--------->TOE2(3)     <---   gatcggaatcactatcccactccatttgattttgcatacacacccacaaaataaagcttaagcccactaatcttcttcctcagcaacaggagaagagacc  8204400                                           <------MYB46(1)                                           <------MYB83                                    --------->ARR11(3)                                    <---------ARR11(3)                                   <---------CCA1(2)                --------->DAG2  <----------ID1                   <---------GLK1(1)               ---------->DOF2 ========RAV                       --------->GLK1(1)           <------ZmHOX2a(1) ----->HSFB2a(2)              <---------At4g35610             ----------->GT1 ------HSFB2a(2)             --------->GLK1(2)            <---------ALFIN1                     ------ --------RAV1(2)           <------ZmHOX2a(1)             <---------REM1(2)                  ---------   cagaagaacaaagtttgattttgaatcgaggaatctgatatctgtaggtaatcgaagtctccacaggaaaaaagttccaaactttagacaaacccagaaa  8204500                                                                                                    <                                                                                                   <-                                                                                                 ----                                                                                                 ----                                                                                                -----                                                                                                -----                                                                                                -----                                                                                               ------                                                                                               ------                               <---------ARR14(2)                                              ------                               --------->ARR14(2)                                              ------                    --------->CCA1(2)                                         <------MYB83    <------                <------ZmHOX2a(1)                                <---------At4g35610    --------->HSFC1(2)          <------ZmHOX2a(1)    <---------GLK1(2)                --------->GLK1(2)       <---------HSFC1(2) --->GLK1(1) <-----------RAV1(2)                              <------ZmHOX2a(1)  --------->MYB52(1)-- >LBD16<---------LBD16         --------->ARR11(3)       ---------->DOF2       <------MYB46(1)<-------   tcgtcttcttcaggaacaggagatagaagaacagattttgaaatggaatcgagcgaagaaaagaggaatctgatatttgtaggtaatggaagtctccacc  8204600                                                <---------MYB46(3)                                                <---------ETT(2)                                              <-------GAMYB                                             <------MYB46(1) ---------ALFIN1                             <------MYB83 --------ZAT18                               <---------DEAR3(2) -->NtERF2                                  <---------MYB46(3) ----->ABI4(1)                              --------->MYB55(2) -->GAMYB                                   <---------DEAR3(1) ---->DREB2C(2)                           <-----------HVH21 ---->DEAR3(1)                          --------->MYB59 --->MYB46(3)                         --------->ARR14(1) --->ANAC46                         --------->ATHB12 --->DEAR3(2)           >>>>>>>>>TBF1--------->ARR11(1)                                   <---------- --->ORA47(2)  <------ZmHOX2a(1)   <---------YAB1  ----------->HVH21                   --------->TOE2(3) ---ATERF1(1)------------------------>ANAC81<---------DREB2C(2)                        <----------DOF2 ------->DEAR3(1)    >>>>>>>>>TBF1 ----------->ARR10                          <----------DOF2 --ALFIN1   <------ZmHOX2a(1)    <---------At4g35610       <-----------ARR10  <---------DAG2        <   gcccacttctaagaggaggagaagaagaagaagagagatgattcggtcggtcgatgactcggctcttctcagtgcctctccttttccatctttaaccaga  8204700                                                                  <---------ANAC58                  --------->MYB52(1)                 --------->ARR14(2)               <---------MYB59                       <---------ARR11(3)                  ------------               --------->TOE2(3)                     <---------ARR14(2)      <---------AHL20(2)               <---------DAG2          --------->LBD16   ------>ZmHOX2a(1) <---------CCA1(1)               --------->TOE1(3)     <---------LBD16--------->RVE1(1)      <---------RVE1(1)    --------->TOE2(3)              <---------ARR14(2)--------->ARR11(3)   <---------ARR11(3)------>MYB46(1) -GT1       <-----------GT1     <<<<<<<<<GATA-1     --------->CCA1(1)     --------->ARR11(3)------>MYB83 ---------MYB52(1)-------->P   <-----------GT1 --------->ANAC46   <---------ANAC58     <-----------GT1   ccggtttcttaattttaccttaccggtttagtttatctatccggtttacacaaaatatcctgtaagtttcttatgagatttttttggttttaccaaatga  8204800                       --------->AHL20(2)                       <---------AHL20(2)                --------->ATHB12              <---------AHL20(2)                   <---------YAB1                           <--------       --------->GLK1(2)                         --------->YAB1               <---------ANAC58   --------->YAB1  --------->ATHB12          <---------AHL20(2)               <---------ANAC58 ----->AG     <---------YAB1  --------->TOE2(3) <---------YAB1               <---------ICU4 ---------   gtgtattagaatcagttttattgatttaaaaacattagaaacttgaatttatcatgaaaccattgcatccaaaacccaattcttgctcatcgaaacgttc  8204900  Previous    Next  AGI:  At2g18915.1    Description:  LKP2 (LOV KELCH PROTEIN 2); ubiquitin-protein ligase. Identical to Adagio protein 2 (ADO2) [Arabidopsis Thaliana] (GB:Q8W420;GB:Q9C5S6); similar to ZTL (ZEITLUPE), ubiquitin-protein ligase [Arabidopsis thaliana] (TAIR:AT5G57360.1); similar to FKF1 (FLAVIN-BINDING KELCH DOMAIN F BOX PROTEIN), ubiquitin-protein ligase [Arabidopsis thaliana] (TAIR:AT1G68050.1); similar to ZTL [Ipomoea nil] (GB:ABC25060.2); similar to hypothetical protein [Vitis vinifera] (GB:CAN82181.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43219.1); contains InterPro domain PAC motif; (InterPro:IPR001610); contains InterPro domain Kelch repeat type 1 (Int Range:  from: 8201654    to: 8204356    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g18917.1    Description:  other RNA Range:  from: 8204196    to: 8205185    Orientation: Forward Links:  TAIR  MIPS    AGI:  At2g18920.1    Description:  unknown protein Range:  from: 8204835    to: 8205242    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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